| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347350
Identifier: 29347350
GI number: 29347350
Start: 2441541
End: 2443151
Strand: Reverse
Name: 29347350
Synonym: BT_1940
Alternate gene names: NA
Gene position: 2443151-2441541 (Counterclockwise)
Preceding gene: 29347351
Following gene: 29347349
Centisome position: 39.03
GC content: 39.29
Gene sequence:
>1611_bases ATGGATTACGATGAATGCAGGGCCAAAATATCAATCATAGACATAGCAGAGGATCTCGGATATACACGTATATCGGGCAG ACAAGCAACGAACTTGACCTATGTTCTTGGCACCCCCCAAAATCCAGAAGACGAAATAGTCATCTTTCCTAAAAAGAACA CCTATTTCTCAAGGAAAGGCAGCTTTGACGATAAGGGAGAGCTGACCAAGTTCGTCCTTAAAAGATTGCATATGTTCTCT TATTGCACTCAGCAGGGATATAGGGGAGTCAATGAAGTTCTTTCAAGATATATGACTGGCGAAAGAATTGTCACCGGAAA CGTACAAAGCCGTACAAAAGACCACACCCAGAACTACATTAAGGAATTCAATTTGAATTATTGGAATCCTCGTCCTATCA AAAAGGATAATCCATATTTGACCGTCCAAAGGAAGCTCTCTCCACAGACTGTGGAGGATTTCGCCAATAGACTGTTCATC TACCAGGTAGGAAAAAACAATCATATCGGCTTTCCATTCCGCAAACCCTCCCAGATGGAAATCCTTAACTTTGAAATGAG GAACTATTTTGCAGAGACCAATACCAATTATAAAGCCTTTGCCACGGGTGGTGACAAGGCACAAAGCTGTTGGATGGCCA ATTTTGTTCCTTTTGACAAGGTTACAGACATATATCTCTTTGAATCCGCTATTGACGCAATGAGTTTCTACGAAATAAAC CATTATACTAAAGAAACCACATGCGCATTCATAAGCACGGGGGGATATGTCACCAAATCCCAAATAGAGAATATAAGCCG TATATTCCCATCTGATAAGGTAAAGTGGAATTGTTGCTATGACAATGATGCCAGCGGTAATGGTTTTGACATCACCACAG CATATTATCTCAAAGGTGAGGAATGTAAAGCTTTTGCAAGGACCAACACTGGAGACACATATAAGACCATCTATTTAAGT TTCCCGGATGGAAACACACAGACCTTCAAAGAAGATGCATTTTCCTCCGGCGAGTATCTTAAACAACATAGTATAGACAA TGTAAATATCATCAAACCTTCACGGTACAAAGATTGGAATGAGCTTCTTGTCTATTACAAAAGATTTGATTTGAACCTGG GTCCAGGAATGAAATTCATCCCGGCTATCGAAAAGACCATATCCCAACTGAATCTAAGAGGATATGAACAATTGGCCAAT AGTATCAGTTCTTCCACAAAAGAACTGGTGGATTCTCTGCTTGAGCAAGCCAATTACTGCATTTCCGCACCTCTTGCCGA GAGCGGCGCTTATACTCTTATGGTAGACTGTAATATCTTCATGGGGCTGGACACGATGGTACCGGTACCAAGCAACTTAT ATGTTATAGAAAAGTGCACGCAAAAAAAGATATCGGCACATGCCATAAATGAATTTCTTAAAAAAGAATATATAAACATT TTTAGAGACATGAGTTCATCTGATTTCAAAAATTTTCTAGAGAAAGACATCCTAACTTATACAAAGGGTGCTGTAGAAAA GAATTTTGAGAAAGTGATATTGACTTTCGGATGGAGCCTTAAACCTTCAATTCTAAAAAAAAAGAGTTTTGACTTAGAAC ATGGTATATAG
Upstream 100 bases:
>100_bases CAGATTCGTCAGCAGAAATATAGAATAAAAAAAGTTTTTCTCCCTTTTTTCCCTATCAGTTCAAAAAAATGTGTAATTTT AAATTTTAAAAGATATGAAA
Downstream 100 bases:
>100_bases CATAACAATACAGCATGATACCATAATAGTAGCTGTTTCAAGCAGACATGTTGTCACAATTCCTGCCAGGTTTAATGGAA TGATTCTCGGGCTTTGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 536; Mature: 536
Protein sequence:
>536_residues MDYDECRAKISIIDIAEDLGYTRISGRQATNLTYVLGTPQNPEDEIVIFPKKNTYFSRKGSFDDKGELTKFVLKRLHMFS YCTQQGYRGVNEVLSRYMTGERIVTGNVQSRTKDHTQNYIKEFNLNYWNPRPIKKDNPYLTVQRKLSPQTVEDFANRLFI YQVGKNNHIGFPFRKPSQMEILNFEMRNYFAETNTNYKAFATGGDKAQSCWMANFVPFDKVTDIYLFESAIDAMSFYEIN HYTKETTCAFISTGGYVTKSQIENISRIFPSDKVKWNCCYDNDASGNGFDITTAYYLKGEECKAFARTNTGDTYKTIYLS FPDGNTQTFKEDAFSSGEYLKQHSIDNVNIIKPSRYKDWNELLVYYKRFDLNLGPGMKFIPAIEKTISQLNLRGYEQLAN SISSSTKELVDSLLEQANYCISAPLAESGAYTLMVDCNIFMGLDTMVPVPSNLYVIEKCTQKKISAHAINEFLKKEYINI FRDMSSSDFKNFLEKDILTYTKGAVEKNFEKVILTFGWSLKPSILKKKSFDLEHGI
Sequences:
>Translated_536_residues MDYDECRAKISIIDIAEDLGYTRISGRQATNLTYVLGTPQNPEDEIVIFPKKNTYFSRKGSFDDKGELTKFVLKRLHMFS YCTQQGYRGVNEVLSRYMTGERIVTGNVQSRTKDHTQNYIKEFNLNYWNPRPIKKDNPYLTVQRKLSPQTVEDFANRLFI YQVGKNNHIGFPFRKPSQMEILNFEMRNYFAETNTNYKAFATGGDKAQSCWMANFVPFDKVTDIYLFESAIDAMSFYEIN HYTKETTCAFISTGGYVTKSQIENISRIFPSDKVKWNCCYDNDASGNGFDITTAYYLKGEECKAFARTNTGDTYKTIYLS FPDGNTQTFKEDAFSSGEYLKQHSIDNVNIIKPSRYKDWNELLVYYKRFDLNLGPGMKFIPAIEKTISQLNLRGYEQLAN SISSSTKELVDSLLEQANYCISAPLAESGAYTLMVDCNIFMGLDTMVPVPSNLYVIEKCTQKKISAHAINEFLKKEYINI FRDMSSSDFKNFLEKDILTYTKGAVEKNFEKVILTFGWSLKPSILKKKSFDLEHGI >Mature_536_residues MDYDECRAKISIIDIAEDLGYTRISGRQATNLTYVLGTPQNPEDEIVIFPKKNTYFSRKGSFDDKGELTKFVLKRLHMFS YCTQQGYRGVNEVLSRYMTGERIVTGNVQSRTKDHTQNYIKEFNLNYWNPRPIKKDNPYLTVQRKLSPQTVEDFANRLFI YQVGKNNHIGFPFRKPSQMEILNFEMRNYFAETNTNYKAFATGGDKAQSCWMANFVPFDKVTDIYLFESAIDAMSFYEIN HYTKETTCAFISTGGYVTKSQIENISRIFPSDKVKWNCCYDNDASGNGFDITTAYYLKGEECKAFARTNTGDTYKTIYLS FPDGNTQTFKEDAFSSGEYLKQHSIDNVNIIKPSRYKDWNELLVYYKRFDLNLGPGMKFIPAIEKTISQLNLRGYEQLAN SISSSTKELVDSLLEQANYCISAPLAESGAYTLMVDCNIFMGLDTMVPVPSNLYVIEKCTQKKISAHAINEFLKKEYINI FRDMSSSDFKNFLEKDILTYTKGAVEKNFEKVILTFGWSLKPSILKKKSFDLEHGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61724; Mature: 61724
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYDECRAKISIIDIAEDLGYTRISGRQATNLTYVLGTPQNPEDEIVIFPKKNTYFSRKG CCHHHHHCEEEEEEEHHHCCCEEECCCCCCCEEEEEECCCCCCCCEEEEECCCCEECCCC SFDDKGELTKFVLKRLHMFSYCTQQGYRGVNEVLSRYMTGERIVTGNVQSRTKDHTQNYI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCHHCCHHHHHHHH KEFNLNYWNPRPIKKDNPYLTVQRKLSPQTVEDFANRLFIYQVGKNNHIGFPFRKPSQME HHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCC ILNFEMRNYFAETNTNYKAFATGGDKAQSCWMANFVPFDKVTDIYLFESAIDAMSFYEIN EEEHHHHHHHHHCCCCEEEEECCCCHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH HYTKETTCAFISTGGYVTKSQIENISRIFPSDKVKWNCCYDNDASGNGFDITTAYYLKGE CCCCCCEEEEEECCCEEEHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEEEECC ECKAFARTNTGDTYKTIYLSFPDGNTQTFKEDAFSSGEYLKQHSIDNVNIIKPSRYKDWN HHHHEECCCCCCCEEEEEEECCCCCCCHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCHH ELLVYYKRFDLNLGPGMKFIPAIEKTISQLNLRGYEQLANSISSSTKELVDSLLEQANYC HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCE ISAPLAESGAYTLMVDCNIFMGLDTMVPVPSNLYVIEKCTQKKISAHAINEFLKKEYINI EECCCCCCCCEEEEEECEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH FRDMSSSDFKNFLEKDILTYTKGAVEKNFEKVILTFGWSLKPSILKKKSFDLEHGI HHCCCCHHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure MDYDECRAKISIIDIAEDLGYTRISGRQATNLTYVLGTPQNPEDEIVIFPKKNTYFSRKG CCHHHHHCEEEEEEEHHHCCCEEECCCCCCCEEEEEECCCCCCCCEEEEECCCCEECCCC SFDDKGELTKFVLKRLHMFSYCTQQGYRGVNEVLSRYMTGERIVTGNVQSRTKDHTQNYI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCHHCCHHHHHHHH KEFNLNYWNPRPIKKDNPYLTVQRKLSPQTVEDFANRLFIYQVGKNNHIGFPFRKPSQME HHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCC ILNFEMRNYFAETNTNYKAFATGGDKAQSCWMANFVPFDKVTDIYLFESAIDAMSFYEIN EEEHHHHHHHHHCCCCEEEEECCCCHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH HYTKETTCAFISTGGYVTKSQIENISRIFPSDKVKWNCCYDNDASGNGFDITTAYYLKGE CCCCCCEEEEEECCCEEEHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEEEECC ECKAFARTNTGDTYKTIYLSFPDGNTQTFKEDAFSSGEYLKQHSIDNVNIIKPSRYKDWN HHHHEECCCCCCCEEEEEEECCCCCCCHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCHH ELLVYYKRFDLNLGPGMKFIPAIEKTISQLNLRGYEQLANSISSSTKELVDSLLEQANYC HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCE ISAPLAESGAYTLMVDCNIFMGLDTMVPVPSNLYVIEKCTQKKISAHAINEFLKKEYINI EECCCCCCCCEEEEEECEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH FRDMSSSDFKNFLEKDILTYTKGAVEKNFEKVILTFGWSLKPSILKKKSFDLEHGI HHCCCCHHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA