| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347299
Identifier: 29347299
GI number: 29347299
Start: 2376377
End: 2376961
Strand: Reverse
Name: 29347299
Synonym: BT_1889
Alternate gene names: NA
Gene position: 2376961-2376377 (Counterclockwise)
Preceding gene: 29347303
Following gene: 29347297
Centisome position: 37.97
GC content: 43.59
Gene sequence:
>585_bases ATGGATATCCTTGATGTTGCAAGACGAAATCAGCAGAAAGCATGGGAAATAATAGAGAAAGTCAATGTTATCCCGATATG GGAAAGTATTGGTGCACAGGTTAATCTGGTTGGTTCTCTTCGTATGGGGTTGCTGATGAAACACCGGGATATTGATTTTC ATATATATACGTCTTCTTTAAGTTTAGCCGATAGTTTCAGGGCGATGGCGAAGCTGGCGGAAAACACGTCAGTGAAGAAG ATAGAGTGCGTGAATCTGCTGCATACTGTTGAGGCGTGTGTTGAATGGCATGCCTGGTATCAGGATTCGGATAATGCACT CTGGCAAATTGATATGATACATATCCGGAAAGGTTCCCGATACGATGGGTATTTTGAGAAAGTAGCCGAACGTATTTCTT CCGTCTTGACAGATGAGATTAAGCGGACAATTCTTCAATTGAAAAATGAGACACCCGAAAGTGAAAAGATTATGGGGGTA GAATATTATCAGGCTGTCATACGGGATGGAGTGCGGACTTATGCCGGGTTTGAAGAATGGCGAAAAGAGCATCCGGTGGG AGGAGTGCTGGAATGGATGCCTTAA
Upstream 100 bases:
>100_bases GGCAAAGTTAGCTAGATCCGGTGGGGTATTAAATAGTTATTTATAGCTATATATCAAGCCTTTTTCTTATTTTTGCGTGC TCATTTAATCTAGAAGAAAG
Downstream 100 bases:
>100_bases TCAGCTTAATATCCCCGTCTCATATCCTATTCGGATGGCTTCAATGGAATTTTGTACTCCTAATTTCCGTAATAGATTCT GTCGGTGAATATTGACGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MDILDVARRNQQKAWEIIEKVNVIPIWESIGAQVNLVGSLRMGLLMKHRDIDFHIYTSSLSLADSFRAMAKLAENTSVKK IECVNLLHTVEACVEWHAWYQDSDNALWQIDMIHIRKGSRYDGYFEKVAERISSVLTDEIKRTILQLKNETPESEKIMGV EYYQAVIRDGVRTYAGFEEWRKEHPVGGVLEWMP
Sequences:
>Translated_194_residues MDILDVARRNQQKAWEIIEKVNVIPIWESIGAQVNLVGSLRMGLLMKHRDIDFHIYTSSLSLADSFRAMAKLAENTSVKK IECVNLLHTVEACVEWHAWYQDSDNALWQIDMIHIRKGSRYDGYFEKVAERISSVLTDEIKRTILQLKNETPESEKIMGV EYYQAVIRDGVRTYAGFEEWRKEHPVGGVLEWMP >Mature_194_residues MDILDVARRNQQKAWEIIEKVNVIPIWESIGAQVNLVGSLRMGLLMKHRDIDFHIYTSSLSLADSFRAMAKLAENTSVKK IECVNLLHTVEACVEWHAWYQDSDNALWQIDMIHIRKGSRYDGYFEKVAERISSVLTDEIKRTILQLKNETPESEKIMGV EYYQAVIRDGVRTYAGFEEWRKEHPVGGVLEWMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22541; Mature: 22541
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILDVARRNQQKAWEIIEKVNVIPIWESIGAQVNLVGSLRMGLLMKHRDIDFHIYTSSL CCHHHHHHCCHHHHHHHHHHCCCEEEHHHCCCEEEEHHHHHHHHHHHCCCCEEEEEECCH SLADSFRAMAKLAENTSVKKIECVNLLHTVEACVEWHAWYQDSDNALWQIDMIHIRKGSR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCC YDGYFEKVAERISSVLTDEIKRTILQLKNETPESEKIMGVEYYQAVIRDGVRTYAGFEEW CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHH RKEHPVGGVLEWMP HHHCCCCCCCCCCC >Mature Secondary Structure MDILDVARRNQQKAWEIIEKVNVIPIWESIGAQVNLVGSLRMGLLMKHRDIDFHIYTSSL CCHHHHHHCCHHHHHHHHHHCCCEEEHHHCCCEEEEHHHHHHHHHHHCCCCEEEEEECCH SLADSFRAMAKLAENTSVKKIECVNLLHTVEACVEWHAWYQDSDNALWQIDMIHIRKGSR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCC YDGYFEKVAERISSVLTDEIKRTILQLKNETPESEKIMGVEYYQAVIRDGVRTYAGFEEW CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHH RKEHPVGGVLEWMP HHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA