| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347296
Identifier: 29347296
GI number: 29347296
Start: 2373541
End: 2374638
Strand: Reverse
Name: 29347296
Synonym: BT_1886
Alternate gene names: NA
Gene position: 2374638-2373541 (Counterclockwise)
Preceding gene: 29347297
Following gene: 29347295
Centisome position: 37.93
GC content: 41.26
Gene sequence:
>1098_bases ATGGCCAAGCACAGAATAAAATATATGAAATCATTTTTTATAGGAAATATTGAAATTAAAGTACCTGTTATACAAGGTGG AATGGGAGTTGGGATATCATTGTCCGGTCTGGCGTCAGCAGTAGCAAACGAAGGGGGAGTGGGAGTTATATCGTGTGCAG GTCTGGGGTTGCTTTATCCCAAAGAAAAAGGCACTTATACAGAAAAATGCATCAGTGGCCTGAAAGAAGAGATTCGCAAA TCACGCATGAAAACAAAAGGTATTATTGGTGTGAATGTCATGGTTGCCTTATCGAATTATGCTGATATGGTGCGTACTGC GATTAATGAAAAGATTGATGTGATATTTTCCGGTGCCGGACTTCCACTTGATTTGCCTTCCTATTTGACTACGGGGAGTA TTACGAAATTAGTACCTATTGTATCTTCTTCAAGAGCTGCCAAAATAATCTGTGACAAATGGCAAAAGAATTATAACTAT CTGCCGGATGCGATAGTGGTAGAAGGTCCCAAAGCCGGAGGGCATCTGGGTTTTAAGAAAGAACAGCTGCAAGACCAGAA TTATGCGTTGGATGTATTGATTCCCGAAGTAGTGGCGATTGCGGCCAGTTATAAAGAACAGAAACATATTCCGGTGATTG CCGCCGGTGGAATTTCGACAGGTGAAGATATTGCGCACTTTATGGAACTGGGAGCTTCGGGAGTGCAGATGGGAAGTATT TTCGTGACAACCCTTGAATGTGATGCTTCGGAAACTTTCAAAGAAGTGTATATTCACTCCAAATCCGAAGATGTTCTTAT TATTGAAAGTCCTGTCGGAATGCCGGGACGGGCTATTGACGGAGAATTTATTCATAGTGTGAATAATGGTCTGGAAAAGC CGAGGAAATGCTCATTCCATTGCATTAAGACGTGTGACTATACAAAAAGTCCTTATTGCATTATTAAAGCGCTGTATAAT GCGGCCAAAGGAAATATGAAAAAAGGTTATGCTTTTGCCGGTAGCAACGCCTTTCTCGCAGATAAAATAAGCAGTGTGAA AGAAGTGATGAATACACTGGAACGCGAGTTTTTCTTAGCGACTCACAAACTGGTTTAA
Upstream 100 bases:
>100_bases GTGAGAGTTTAATAAATAATATCCAATCAAGCGAACAGCCAATGATGAAGGCGACTTTGAATACTTGAATAGAGTATGTT CGGAGTGTGTTGATTTTGAA
Downstream 100 bases:
>100_bases TATCGGAGACCTTGCATATTCAGTATTGAATGTGTTGTGCTCTCTTACTATATATAAAATTAACCGCTGTGCTGAAACAG CAAAAATAACATTTATGACA
Product: hypothetical protein
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MAKHRIKYMKSFFIGNIEIKVPVIQGGMGVGISLSGLASAVANEGGVGVISCAGLGLLYPKEKGTYTEKCISGLKEEIRK SRMKTKGIIGVNVMVALSNYADMVRTAINEKIDVIFSGAGLPLDLPSYLTTGSITKLVPIVSSSRAAKIICDKWQKNYNY LPDAIVVEGPKAGGHLGFKKEQLQDQNYALDVLIPEVVAIAASYKEQKHIPVIAAGGISTGEDIAHFMELGASGVQMGSI FVTTLECDASETFKEVYIHSKSEDVLIIESPVGMPGRAIDGEFIHSVNNGLEKPRKCSFHCIKTCDYTKSPYCIIKALYN AAKGNMKKGYAFAGSNAFLADKISSVKEVMNTLEREFFLATHKLV
Sequences:
>Translated_365_residues MAKHRIKYMKSFFIGNIEIKVPVIQGGMGVGISLSGLASAVANEGGVGVISCAGLGLLYPKEKGTYTEKCISGLKEEIRK SRMKTKGIIGVNVMVALSNYADMVRTAINEKIDVIFSGAGLPLDLPSYLTTGSITKLVPIVSSSRAAKIICDKWQKNYNY LPDAIVVEGPKAGGHLGFKKEQLQDQNYALDVLIPEVVAIAASYKEQKHIPVIAAGGISTGEDIAHFMELGASGVQMGSI FVTTLECDASETFKEVYIHSKSEDVLIIESPVGMPGRAIDGEFIHSVNNGLEKPRKCSFHCIKTCDYTKSPYCIIKALYN AAKGNMKKGYAFAGSNAFLADKISSVKEVMNTLEREFFLATHKLV >Mature_364_residues AKHRIKYMKSFFIGNIEIKVPVIQGGMGVGISLSGLASAVANEGGVGVISCAGLGLLYPKEKGTYTEKCISGLKEEIRKS RMKTKGIIGVNVMVALSNYADMVRTAINEKIDVIFSGAGLPLDLPSYLTTGSITKLVPIVSSSRAAKIICDKWQKNYNYL PDAIVVEGPKAGGHLGFKKEQLQDQNYALDVLIPEVVAIAASYKEQKHIPVIAAGGISTGEDIAHFMELGASGVQMGSIF VTTLECDASETFKEVYIHSKSEDVLIIESPVGMPGRAIDGEFIHSVNNGLEKPRKCSFHCIKTCDYTKSPYCIIKALYNA AKGNMKKGYAFAGSNAFLADKISSVKEVMNTLEREFFLATHKLV
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 39431; Mature: 39300
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHRIKYMKSFFIGNIEIKVPVIQGGMGVGISLSGLASAVANEGGVGVISCAGLGLLYP CCCHHHHHHHHHHCCCEEEEEEEEECCCCCCEEHHHHHHHHHCCCCEEEEEECCCCEEEC KEKGTYTEKCISGLKEEIRKSRMKTKGIIGVNVMVALSNYADMVRTAINEKIDVIFSGAG CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEHEEEHHHHHHHHHHHHCCCEEEEEECCC LPLDLPSYLTTGSITKLVPIVSSSRAAKIICDKWQKNYNYLPDAIVVEGPKAGGHLGFKK CCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCH EQLQDQNYALDVLIPEVVAIAASYKEQKHIPVIAAGGISTGEDIAHFMELGASGVQMGSI HHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEECEE FVTTLECDASETFKEVYIHSKSEDVLIIESPVGMPGRAIDGEFIHSVNNGLEKPRKCSFH EEEEEECCCHHHHHHHHEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEE CIKTCDYTKSPYCIIKALYNAAKGNMKKGYAFAGSNAFLADKISSVKEVMNTLEREFFLA EEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH THKLV HHCCC >Mature Secondary Structure AKHRIKYMKSFFIGNIEIKVPVIQGGMGVGISLSGLASAVANEGGVGVISCAGLGLLYP CCHHHHHHHHHHCCCEEEEEEEEECCCCCCEEHHHHHHHHHCCCCEEEEEECCCCEEEC KEKGTYTEKCISGLKEEIRKSRMKTKGIIGVNVMVALSNYADMVRTAINEKIDVIFSGAG CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEHEEEHHHHHHHHHHHHCCCEEEEEECCC LPLDLPSYLTTGSITKLVPIVSSSRAAKIICDKWQKNYNYLPDAIVVEGPKAGGHLGFKK CCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCH EQLQDQNYALDVLIPEVVAIAASYKEQKHIPVIAAGGISTGEDIAHFMELGASGVQMGSI HHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEECEE FVTTLECDASETFKEVYIHSKSEDVLIIESPVGMPGRAIDGEFIHSVNNGLEKPRKCSFH EEEEEECCCHHHHHHHHEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEE CIKTCDYTKSPYCIIKALYNAAKGNMKKGYAFAGSNAFLADKISSVKEVMNTLEREFFLA EEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH THKLV HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA