| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347288
Identifier: 29347288
GI number: 29347288
Start: 2362810
End: 2365011
Strand: Reverse
Name: 29347288
Synonym: BT_1878
Alternate gene names: NA
Gene position: 2365011-2362810 (Counterclockwise)
Preceding gene: 29347293
Following gene: 29347287
Centisome position: 37.78
GC content: 45.28
Gene sequence:
>2202_bases ATGATTATCATGAAAAGAAAATCCCCTGTGATGGCCGTTGCTTTGGCGGGACTGTTTATGTACACTTCCTGTTCTCCGAC GGAGCAAGCGGAAACGAAAGATTACACCCAGTATGTGAATACCTTTATTGGTGCTGCTGACAATGGGCATACATTCCCCG GAGCTTGCTATCCTTTCGGAATGATACAGACCAGTCCGGTGACGGGTGCAGTAGGTTGGAGATATTGTTCGGAATATACT TATCAGGACTCTCTGATCTGGGGCTTCACTCAGACTCATCTGAACGGAACCGGATGTATGGATTTGGGGGATATTCTGGT GATGCCAGTTACCGGTACCCGTGCTCGTGCATGGGATGCTTACCGCAGCCATTTCCCGAAAGACAAGGAAGCTGCTACTC CGGGATATTATACAGTCGAATTATCCGATCCGCAGGTAAAGGCGGAACTGACTGCTTCTATCCATGCAGCTCTTCATCGT TATACATATCATAAAGCGGATTCAGCTTCTCTGCTGATTGACTTGCAGCACGGACCTGCCTGGAGAGAAGAACAATATCA TTCACAAGTGAATAGTTGCGAGGTGAACTGGGAAGATGCTCAGACGCTGGCCGGACACGTGAATAACACGGTCTGGGTTG ATCAGGACTACTTCTTTGTGATGAAGTTTAATCGTCCGGTAATAGATTCGCTTTACCTTCCGATGGGAGAAACTGAGAAA GGAAAGCGAATCATTGCTACTTTCGACTTGAAGCCGGGAGATGAACTGATGATGAAGGTGGCCCTTTCGACTACCAGCGT AGAGGGAGCAAAGAAGAACTTGCAGGCTGAAATACCAGACTGGAACTTTGACGGTGTGAAGCTGGCTGCCCATGACGAAT GGAACAGCTATCTGAGTCGCATGGACGTAGAGGGTACGGATGATGAAAAGACGAATTTCTATACTTGTTTCTATCACGCA CTGATTCAGCCTAACCAGATTTCAGACGTAGACGGTATGTATCGTAATGCTGCCGATTCGATTGTGAAGGCCGGAACAGG AACATTCTATTCAACCTTCTCTTTATGGGATACTTATCGTGCCGCTCATCCATTCTATACATTAATGGTTCCCGAACGTG TGGATGATTTTGTTAATTCATTGATAGAACAAGGTGAAGTACAAGGCTTCCTGCCTATTTGGGCATTGTGGGGAAAAGAA AACTTCTGTATGATCGGCAATCATGGTGTATCTGTTATTGCTGAAGCCTACCGAAAAGGTTTCCGTGGTTTTGATGCGGA ACGTGCTTTCAATATGGTGAAGAAGACACAGACTGTATCTCATCCGTTGAAGTCCGACTGGGAAGTGTATACGAAATACG GATATTTTCCGACCGACCTGACAAAAGCAGAATCCGTCTCTTCAACTCTGGAATCGGTATATGACGATTATGCGGCAGCT GACATGGCCCGTCGTATGGGAAAAGAAGAAGATGCTGCTTACTTTGCGAAACGTGCAGATTATTATAAGAACTTATTCGA TTCACAGACGAATTTTATGCGTCCGCGTAAAGCTGACGGAACCTGGAAATCTCCGTTTAATCCTAGTGATGTAGGACATG CGGAAAGTACAGGCGGTGACTATACGGAAGGAAATGCATGGCAATATACCTGGCATGTGCAACACGATGTTCCCGGTTTG ATTGCTCTCTTTGGTGGAGAAGAACCTTTCCTGAACAAGCTGGATTCCCTGTTTACAGTGAAACTGGAAACAACCCAGGC TGATGTGACAGGTTTGATCGGACAGTATGCACATGGTAATGAGCCCAGTCATCATGTTACTTATTTATATGCTTTGGCAG GGCGTCCGGAACGTACACAGGAACTAATCCGTGAAATCTTTGATACTCAATATAAGAACAAGCCTGACGGACTTTGTGGT AATGATGACTGTGGTCAGATGTCCGCATGGTATATGTTCAGTGCAATGGGTTTCTATCCGGTAGATCCGGTAAGCGGTGA TTATGTATTCGGAGCTCCTCAGTTACCGAAGATTGTGCTACATCTGGCTGATGGAAAGACCTTTACTGTGATCGCTGAAA ACTTATCGAAGGAACATAAATATGTGGATAGTATCACGCTGAATGGCGAACCTTATACAAAGAATACGATTTCTCATGAA GATATTCTGAAAGGTGGTACACTCGTATATAAGATGAAATAG
Upstream 100 bases:
>100_bases ATATAAATTTTGAATGATCGGACTTGGGGACCATTTTTCTATTGTATTTTAGTGTAGCATTGAGAATTATTCTCTAAATT TGTAGCATTAACTTAACATT
Downstream 100 bases:
>100_bases ACTGTATACAGAGTAGTATAAAGAAGATCCCTCCAAAGTTTTTTTCTTTGGAGGGATTTTTGGCTTTATATGCTTTAAAT TCGAATAATTCTCTAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Glycosyltransferase; Alpha-1 2-Mannosidase Protein; Lipoprotein
Number of amino acids: Translated: 733; Mature: 733
Protein sequence:
>733_residues MIIMKRKSPVMAVALAGLFMYTSCSPTEQAETKDYTQYVNTFIGAADNGHTFPGACYPFGMIQTSPVTGAVGWRYCSEYT YQDSLIWGFTQTHLNGTGCMDLGDILVMPVTGTRARAWDAYRSHFPKDKEAATPGYYTVELSDPQVKAELTASIHAALHR YTYHKADSASLLIDLQHGPAWREEQYHSQVNSCEVNWEDAQTLAGHVNNTVWVDQDYFFVMKFNRPVIDSLYLPMGETEK GKRIIATFDLKPGDELMMKVALSTTSVEGAKKNLQAEIPDWNFDGVKLAAHDEWNSYLSRMDVEGTDDEKTNFYTCFYHA LIQPNQISDVDGMYRNAADSIVKAGTGTFYSTFSLWDTYRAAHPFYTLMVPERVDDFVNSLIEQGEVQGFLPIWALWGKE NFCMIGNHGVSVIAEAYRKGFRGFDAERAFNMVKKTQTVSHPLKSDWEVYTKYGYFPTDLTKAESVSSTLESVYDDYAAA DMARRMGKEEDAAYFAKRADYYKNLFDSQTNFMRPRKADGTWKSPFNPSDVGHAESTGGDYTEGNAWQYTWHVQHDVPGL IALFGGEEPFLNKLDSLFTVKLETTQADVTGLIGQYAHGNEPSHHVTYLYALAGRPERTQELIREIFDTQYKNKPDGLCG NDDCGQMSAWYMFSAMGFYPVDPVSGDYVFGAPQLPKIVLHLADGKTFTVIAENLSKEHKYVDSITLNGEPYTKNTISHE DILKGGTLVYKMK
Sequences:
>Translated_733_residues MIIMKRKSPVMAVALAGLFMYTSCSPTEQAETKDYTQYVNTFIGAADNGHTFPGACYPFGMIQTSPVTGAVGWRYCSEYT YQDSLIWGFTQTHLNGTGCMDLGDILVMPVTGTRARAWDAYRSHFPKDKEAATPGYYTVELSDPQVKAELTASIHAALHR YTYHKADSASLLIDLQHGPAWREEQYHSQVNSCEVNWEDAQTLAGHVNNTVWVDQDYFFVMKFNRPVIDSLYLPMGETEK GKRIIATFDLKPGDELMMKVALSTTSVEGAKKNLQAEIPDWNFDGVKLAAHDEWNSYLSRMDVEGTDDEKTNFYTCFYHA LIQPNQISDVDGMYRNAADSIVKAGTGTFYSTFSLWDTYRAAHPFYTLMVPERVDDFVNSLIEQGEVQGFLPIWALWGKE NFCMIGNHGVSVIAEAYRKGFRGFDAERAFNMVKKTQTVSHPLKSDWEVYTKYGYFPTDLTKAESVSSTLESVYDDYAAA DMARRMGKEEDAAYFAKRADYYKNLFDSQTNFMRPRKADGTWKSPFNPSDVGHAESTGGDYTEGNAWQYTWHVQHDVPGL IALFGGEEPFLNKLDSLFTVKLETTQADVTGLIGQYAHGNEPSHHVTYLYALAGRPERTQELIREIFDTQYKNKPDGLCG NDDCGQMSAWYMFSAMGFYPVDPVSGDYVFGAPQLPKIVLHLADGKTFTVIAENLSKEHKYVDSITLNGEPYTKNTISHE DILKGGTLVYKMK >Mature_733_residues MIIMKRKSPVMAVALAGLFMYTSCSPTEQAETKDYTQYVNTFIGAADNGHTFPGACYPFGMIQTSPVTGAVGWRYCSEYT YQDSLIWGFTQTHLNGTGCMDLGDILVMPVTGTRARAWDAYRSHFPKDKEAATPGYYTVELSDPQVKAELTASIHAALHR YTYHKADSASLLIDLQHGPAWREEQYHSQVNSCEVNWEDAQTLAGHVNNTVWVDQDYFFVMKFNRPVIDSLYLPMGETEK GKRIIATFDLKPGDELMMKVALSTTSVEGAKKNLQAEIPDWNFDGVKLAAHDEWNSYLSRMDVEGTDDEKTNFYTCFYHA LIQPNQISDVDGMYRNAADSIVKAGTGTFYSTFSLWDTYRAAHPFYTLMVPERVDDFVNSLIEQGEVQGFLPIWALWGKE NFCMIGNHGVSVIAEAYRKGFRGFDAERAFNMVKKTQTVSHPLKSDWEVYTKYGYFPTDLTKAESVSSTLESVYDDYAAA DMARRMGKEEDAAYFAKRADYYKNLFDSQTNFMRPRKADGTWKSPFNPSDVGHAESTGGDYTEGNAWQYTWHVQHDVPGL IALFGGEEPFLNKLDSLFTVKLETTQADVTGLIGQYAHGNEPSHHVTYLYALAGRPERTQELIREIFDTQYKNKPDGLCG NDDCGQMSAWYMFSAMGFYPVDPVSGDYVFGAPQLPKIVLHLADGKTFTVIAENLSKEHKYVDSITLNGEPYTKNTISHE DILKGGTLVYKMK
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82588; Mature: 82588
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIMKRKSPVMAVALAGLFMYTSCSPTEQAETKDYTQYVNTFIGAADNGHTFPGACYPFG CEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC MIQTSPVTGAVGWRYCSEYTYQDSLIWGFTQTHLNGTGCMDLGDILVMPVTGTRARAWDA CEECCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHH YRSHFPKDKEAATPGYYTVELSDPQVKAELTASIHAALHRYTYHKADSASLLIDLQHGPA HHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC WREEQYHSQVNSCEVNWEDAQTLAGHVNNTVWVDQDYFFVMKFNRPVIDSLYLPMGETEK CCHHHHHHHHHCEEECHHHHHHHHHCCCCEEEECCCEEEEEEECCCHHHHHCCCCCCCCC GKRIIATFDLKPGDELMMKVALSTTSVEGAKKNLQAEIPDWNFDGVKLAAHDEWNSYLSR CCEEEEEEECCCCHHHHHEEHHHHCCCCCHHHCCEEECCCCCCCCEEEEECCHHHHHHHH MDVEGTDDEKTNFYTCFYHALIQPNQISDVDGMYRNAADSIVKAGTGTFYSTFSLWDTYR CCCCCCCCCCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH AAHPFYTLMVPERVDDFVNSLIEQGEVQGFLPIWALWGKENFCMIGNHGVSVIAEAYRKG HCCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCHHHHHHHHHHH FRGFDAERAFNMVKKTQTVSHPLKSDWEVYTKYGYFPTDLTKAESVSSTLESVYDDYAAA CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH DMARRMGKEEDAAYFAKRADYYKNLFDSQTNFMRPRKADGTWKSPFNPSDVGHAESTGGD HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YTEGNAWQYTWHVQHDVPGLIALFGGEEPFLNKLDSLFTVKLETTQADVTGLIGQYAHGN CCCCCCEEEEEEECCCCCCEEEEECCCCHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCC EPSHHVTYLYALAGRPERTQELIREIFDTQYKNKPDGLCGNDDCGQMSAWYMFSAMGFYP CCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEE VDPVSGDYVFGAPQLPKIVLHLADGKTFTVIAENLSKEHKYVDSITLNGEPYTKNTISHE CCCCCCCEEECCCCCCEEEEEECCCCEEEEEEHHHHHHHHEEEEEEECCCCCCCCCCCHH DILKGGTLVYKMK HHHCCCEEEEEEC >Mature Secondary Structure MIIMKRKSPVMAVALAGLFMYTSCSPTEQAETKDYTQYVNTFIGAADNGHTFPGACYPFG CEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC MIQTSPVTGAVGWRYCSEYTYQDSLIWGFTQTHLNGTGCMDLGDILVMPVTGTRARAWDA CEECCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHH YRSHFPKDKEAATPGYYTVELSDPQVKAELTASIHAALHRYTYHKADSASLLIDLQHGPA HHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC WREEQYHSQVNSCEVNWEDAQTLAGHVNNTVWVDQDYFFVMKFNRPVIDSLYLPMGETEK CCHHHHHHHHHCEEECHHHHHHHHHCCCCEEEECCCEEEEEEECCCHHHHHCCCCCCCCC GKRIIATFDLKPGDELMMKVALSTTSVEGAKKNLQAEIPDWNFDGVKLAAHDEWNSYLSR CCEEEEEEECCCCHHHHHEEHHHHCCCCCHHHCCEEECCCCCCCCEEEEECCHHHHHHHH MDVEGTDDEKTNFYTCFYHALIQPNQISDVDGMYRNAADSIVKAGTGTFYSTFSLWDTYR CCCCCCCCCCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH AAHPFYTLMVPERVDDFVNSLIEQGEVQGFLPIWALWGKENFCMIGNHGVSVIAEAYRKG HCCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCHHHHHHHHHHH FRGFDAERAFNMVKKTQTVSHPLKSDWEVYTKYGYFPTDLTKAESVSSTLESVYDDYAAA CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH DMARRMGKEEDAAYFAKRADYYKNLFDSQTNFMRPRKADGTWKSPFNPSDVGHAESTGGD HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YTEGNAWQYTWHVQHDVPGLIALFGGEEPFLNKLDSLFTVKLETTQADVTGLIGQYAHGN CCCCCCEEEEEEECCCCCCEEEEECCCCHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCC EPSHHVTYLYALAGRPERTQELIREIFDTQYKNKPDGLCGNDDCGQMSAWYMFSAMGFYP CCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEE VDPVSGDYVFGAPQLPKIVLHLADGKTFTVIAENLSKEHKYVDSITLNGEPYTKNTISHE CCCCCCCEEECCCCCCEEEEEECCCCEEEEEEHHHHHHHHEEEEEEECCCCCCCCCCCHH DILKGGTLVYKMK HHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA