| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is bglX [H]
Identifier: 29347282
GI number: 29347282
Start: 2351893
End: 2354172
Strand: Reverse
Name: bglX [H]
Synonym: BT_1872
Alternate gene names: 29347282
Gene position: 2354172-2351893 (Counterclockwise)
Preceding gene: 29347283
Following gene: 29347281
Centisome position: 37.6
GC content: 48.03
Gene sequence:
>2280_bases ATGAAAATAAGAAATCTGGTGTTTGGTGCCCTTTGTGGCATTACATTCTTTTCCTGTTCGGAGTCTGGTGGGGGAAAAGA GGTAGAGATGGATCGCTTTGTCACAGACCTGATGGGTAAAATGACGATCCGTGAGAAACTGGGACAGTTGAACCTTCCTT CCGGTGGCGACTTGGTGACAGGCTCGGTGATGAATTGTGAGCTTAGTGATATGATTCGCAAAGAAGAGATCGGTGGCTTT TTCAATGTAAAAGGAATCAAAAAAATCTATGACCTGCAACGGCTGGCAGTGGAAGAAACCCGATTGAAAATTCCCTTGAT AGTCGGGGCGGATGTCATACATGGTTATGAAACGATTTTCCCGATACCGTTGGCCCTCTCATGCAGTTGGGATACGTTGG CTATTCAGCGGATGGCGCGGATTTCTGCCATTGAGGCCAGTGCGGATGGCATTTGCTGGACATTCAGCCCGATGGTAGAC ATCTGCCGGGATGCCCGTTGGGGACGTATTGCCGAAGGAAGCGGTGAGGACCCTTATCTGGCTTCACTGTTGGCAAAGGC CTATGTGCACGGTTATCAAGGTGACAGTATGCAGGGAAAAGATGAAATCCTTTCTTGTGTAAAACATTTCGCCCTCTATG GAGCATCAGAAGCCGGTAAGGATTATAATACAGTCGACATGAGCCATCTGCGTATGTATAACGAATATTTTGCTCCTTAT CGGGCGGCGGTTGAGGCTGGTGTCGGTAGTGTGATGAGTTCTTTTAATATAGTAGACGGCATACCGGCTACGGCAAATAA ATGGCTGTTGACAGACGTGCTTCGTGACGAATGGGGATTTCAGGGACTTTTGGTCACAGACTACAATTCCATTGCTGAAA TGTCCATTCATGGTGTGGCTCCTTTGAAGGAAGCCTCTGTCCGTGCTTTGCAGGCGGGGACGGATATGGACATGGTTTCC TGCGGCTTTCTCAATACGTTGGAAGAATCGCTGAAAGAGGGGAAAGTCACCGAAGCACAGATTGATGCAGCTTGCCGTCG TGTGCTGGAGGCTAAGTATAAACTGGGCTTGTTTGCCGATCCATATAAATATTGCGATACGTTACGTGCGGAAAAAGAAC TTTATACACCTGAGCACCGTGCAGTTGCACGCGAGGTTGCGGCAGAGACGTTTGTTCTACTGAAAAATGAGAATCACCTG CTTCCGTTGGAGGAAAAAGGGAAAATTGCATTAATAGGTCCGATGGCAGATGCACGCAATAATATGTGCGGAATGTGGAG CATGACCTGTACTCCGTCCAGACATGGTACATTACTCGAAGGAATCCGGTCGGCAGTAGGAGACAAGGCTGAAATACTTT ATGCCAAAGGCAGCAATGTATATTATGATGCGGAAATGGAAAAAGGAGCTGTCGGCATCCGTCCGTTGGAACGTGGTAAT GATCAGCAACTGCTGGCCGAGGCATTGCGTACGGCTGCCCGTGCCGATGTGATTGTGGCTGCTGTGGGTGAATGTGCGGA AATGAGTGGTGAATCTCCTTCCCGTACTAATCTGGAAATCCCTGACGCTCAGCAGGACTTATTGAAAGCATTGGTGAAAA CAGGTAAGCCTGTGGTACTGCTCCTGTTCACCGGTCGTCCTTTGATCTTGAACTGGGAAAGCGAACACATTCCTTCTATT CTGAATGTATGGTTCGGAGGTAGTGAGACAGGGGATGCCGTTGCCGATGTTCTGTTTGGCAAAGCCGTCCCGTGCGGTAA GCTGACTACTACCTTCCCTCGTTCGGTAGGGCAACTTCCTTTGTTCTACAATCATTTGAACACTGGACGTCCGGACCCGG ACAACCGTGTTTTCAACCGGTATGCCAGCAACTATCTGGATGAGAGTAACGAACCTCTTTATCCTTTCGGATACGGTTTG AGTTATACCGACTTTGTATATGGCGACCTGCAGCTCAGTTCGGAAACCTTGCCGAAAAATGGAAACCTGACAGCTTCCGT TACCGTCACCAACAAAGGGAACCATGACGGCTATGAAACGGTACAAATCTATTTGCGTGATATCTATGCGGAAGTAGCGC GTCCGGTGAAAGAGCTGAAAGGCTTCGATCGTATCTTCCTGAAAAAAGGAGAAAGCCGTGAAGTGAAGTTTGTACTTACG GAAGATGACCTGAAATTTTATAATTCCGGGCTGCAATATATCTACGAACCGGGAGAGTTTGACGTGATGATAGGTACGAA CAGTCGTGATGTACAGACAAAGCGCTTTATTGCGGAATAA
Upstream 100 bases:
>100_bases AGGAAGTGTTAACTTTGGCGAAATAGATTCTGTTGACCGATGTTGCCGTTATTGTATAGAAGGTAAAGTCAGAAAAGTAA ATAAATAATTTGAAGAGCTT
Downstream 100 bases:
>100_bases TTATTTTGAAATCTAATATATTAGTTACAACCATGAAAAAACTTACATTTTTATTATTATGTGTCTTGTGTACGCTTTCG TTGCAAGCTCAGAAGCAATT
Product: periplasmic beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MKIRNLVFGALCGITFFSCSESGGGKEVEMDRFVTDLMGKMTIREKLGQLNLPSGGDLVTGSVMNCELSDMIRKEEIGGF FNVKGIKKIYDLQRLAVEETRLKIPLIVGADVIHGYETIFPIPLALSCSWDTLAIQRMARISAIEASADGICWTFSPMVD ICRDARWGRIAEGSGEDPYLASLLAKAYVHGYQGDSMQGKDEILSCVKHFALYGASEAGKDYNTVDMSHLRMYNEYFAPY RAAVEAGVGSVMSSFNIVDGIPATANKWLLTDVLRDEWGFQGLLVTDYNSIAEMSIHGVAPLKEASVRALQAGTDMDMVS CGFLNTLEESLKEGKVTEAQIDAACRRVLEAKYKLGLFADPYKYCDTLRAEKELYTPEHRAVAREVAAETFVLLKNENHL LPLEEKGKIALIGPMADARNNMCGMWSMTCTPSRHGTLLEGIRSAVGDKAEILYAKGSNVYYDAEMEKGAVGIRPLERGN DQQLLAEALRTAARADVIVAAVGECAEMSGESPSRTNLEIPDAQQDLLKALVKTGKPVVLLLFTGRPLILNWESEHIPSI LNVWFGGSETGDAVADVLFGKAVPCGKLTTTFPRSVGQLPLFYNHLNTGRPDPDNRVFNRYASNYLDESNEPLYPFGYGL SYTDFVYGDLQLSSETLPKNGNLTASVTVTNKGNHDGYETVQIYLRDIYAEVARPVKELKGFDRIFLKKGESREVKFVLT EDDLKFYNSGLQYIYEPGEFDVMIGTNSRDVQTKRFIAE
Sequences:
>Translated_759_residues MKIRNLVFGALCGITFFSCSESGGGKEVEMDRFVTDLMGKMTIREKLGQLNLPSGGDLVTGSVMNCELSDMIRKEEIGGF FNVKGIKKIYDLQRLAVEETRLKIPLIVGADVIHGYETIFPIPLALSCSWDTLAIQRMARISAIEASADGICWTFSPMVD ICRDARWGRIAEGSGEDPYLASLLAKAYVHGYQGDSMQGKDEILSCVKHFALYGASEAGKDYNTVDMSHLRMYNEYFAPY RAAVEAGVGSVMSSFNIVDGIPATANKWLLTDVLRDEWGFQGLLVTDYNSIAEMSIHGVAPLKEASVRALQAGTDMDMVS CGFLNTLEESLKEGKVTEAQIDAACRRVLEAKYKLGLFADPYKYCDTLRAEKELYTPEHRAVAREVAAETFVLLKNENHL LPLEEKGKIALIGPMADARNNMCGMWSMTCTPSRHGTLLEGIRSAVGDKAEILYAKGSNVYYDAEMEKGAVGIRPLERGN DQQLLAEALRTAARADVIVAAVGECAEMSGESPSRTNLEIPDAQQDLLKALVKTGKPVVLLLFTGRPLILNWESEHIPSI LNVWFGGSETGDAVADVLFGKAVPCGKLTTTFPRSVGQLPLFYNHLNTGRPDPDNRVFNRYASNYLDESNEPLYPFGYGL SYTDFVYGDLQLSSETLPKNGNLTASVTVTNKGNHDGYETVQIYLRDIYAEVARPVKELKGFDRIFLKKGESREVKFVLT EDDLKFYNSGLQYIYEPGEFDVMIGTNSRDVQTKRFIAE >Mature_759_residues MKIRNLVFGALCGITFFSCSESGGGKEVEMDRFVTDLMGKMTIREKLGQLNLPSGGDLVTGSVMNCELSDMIRKEEIGGF FNVKGIKKIYDLQRLAVEETRLKIPLIVGADVIHGYETIFPIPLALSCSWDTLAIQRMARISAIEASADGICWTFSPMVD ICRDARWGRIAEGSGEDPYLASLLAKAYVHGYQGDSMQGKDEILSCVKHFALYGASEAGKDYNTVDMSHLRMYNEYFAPY RAAVEAGVGSVMSSFNIVDGIPATANKWLLTDVLRDEWGFQGLLVTDYNSIAEMSIHGVAPLKEASVRALQAGTDMDMVS CGFLNTLEESLKEGKVTEAQIDAACRRVLEAKYKLGLFADPYKYCDTLRAEKELYTPEHRAVAREVAAETFVLLKNENHL LPLEEKGKIALIGPMADARNNMCGMWSMTCTPSRHGTLLEGIRSAVGDKAEILYAKGSNVYYDAEMEKGAVGIRPLERGN DQQLLAEALRTAARADVIVAAVGECAEMSGESPSRTNLEIPDAQQDLLKALVKTGKPVVLLLFTGRPLILNWESEHIPSI LNVWFGGSETGDAVADVLFGKAVPCGKLTTTFPRSVGQLPLFYNHLNTGRPDPDNRVFNRYASNYLDESNEPLYPFGYGL SYTDFVYGDLQLSSETLPKNGNLTASVTVTNKGNHDGYETVQIYLRDIYAEVARPVKELKGFDRIFLKKGESREVKFVLT EDDLKFYNSGLQYIYEPGEFDVMIGTNSRDVQTKRFIAE
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=741, Percent_Identity=46.2887989203779, Blast_Score=667, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 83888; Mature: 83888
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRNLVFGALCGITFFSCSESGGGKEVEMDRFVTDLMGKMTIREKLGQLNLPSGGDLVT CCHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE GSVMNCELSDMIRKEEIGGFFNVKGIKKIYDLQRLAVEETRLKIPLIVGADVIHGYETIF CCEECCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHEEEEEEECCHHHHCCHHHC PIPLALSCSWDTLAIQRMARISAIEASADGICWTFSPMVDICRDARWGRIAEGSGEDPYL CCCEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCHHH ASLLAKAYVHGYQGDSMQGKDEILSCVKHFALYGASEAGKDYNTVDMSHLRMYNEYFAPY HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH RAAVEAGVGSVMSSFNIVDGIPATANKWLLTDVLRDEWGFQGLLVTDYNSIAEMSIHGVA HHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCC PLKEASVRALQAGTDMDMVSCGFLNTLEESLKEGKVTEAQIDAACRRVLEAKYKLGLFAD CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC PYKYCDTLRAEKELYTPEHRAVAREVAAETFVLLKNENHLLPLEEKGKIALIGPMADARN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEECCCCEECCCCCCCEEEEECCHHCCC NMCGMWSMTCTPSRHGTLLEGIRSAVGDKAEILYAKGSNVYYDAEMEKGAVGIRPLERGN CCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCC DQQLLAEALRTAARADVIVAAVGECAEMSGESPSRTNLEIPDAQQDLLKALVKTGKPVVL HHHHHHHHHHHHHHHHHHEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE LLFTGRPLILNWESEHIPSILNVWFGGSETGDAVADVLFGKAVPCGKLTTTFPRSVGQLP EEECCCEEEEECCHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCC LFYNHLNTGRPDPDNRVFNRYASNYLDESNEPLYPFGYGLSYTDFVYGDLQLSSETLPKN EEEHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCHHEEEEEEEECCCCCCCC GNLTASVTVTNKGNHDGYETVQIYLRDIYAEVARPVKELKGFDRIFLKKGESREVKFVLT CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEE EDDLKFYNSGLQYIYEPGEFDVMIGTNSRDVQTKRFIAE CCHHHHHHCCCCEEECCCCEEEEECCCCCCCHHHHHHCC >Mature Secondary Structure MKIRNLVFGALCGITFFSCSESGGGKEVEMDRFVTDLMGKMTIREKLGQLNLPSGGDLVT CCHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE GSVMNCELSDMIRKEEIGGFFNVKGIKKIYDLQRLAVEETRLKIPLIVGADVIHGYETIF CCEECCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHEEEEEEECCHHHHCCHHHC PIPLALSCSWDTLAIQRMARISAIEASADGICWTFSPMVDICRDARWGRIAEGSGEDPYL CCCEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCHHH ASLLAKAYVHGYQGDSMQGKDEILSCVKHFALYGASEAGKDYNTVDMSHLRMYNEYFAPY HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH RAAVEAGVGSVMSSFNIVDGIPATANKWLLTDVLRDEWGFQGLLVTDYNSIAEMSIHGVA HHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCC PLKEASVRALQAGTDMDMVSCGFLNTLEESLKEGKVTEAQIDAACRRVLEAKYKLGLFAD CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC PYKYCDTLRAEKELYTPEHRAVAREVAAETFVLLKNENHLLPLEEKGKIALIGPMADARN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEECCCCEECCCCCCCEEEEECCHHCCC NMCGMWSMTCTPSRHGTLLEGIRSAVGDKAEILYAKGSNVYYDAEMEKGAVGIRPLERGN CCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCC DQQLLAEALRTAARADVIVAAVGECAEMSGESPSRTNLEIPDAQQDLLKALVKTGKPVVL HHHHHHHHHHHHHHHHHHEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE LLFTGRPLILNWESEHIPSILNVWFGGSETGDAVADVLFGKAVPCGKLTTTFPRSVGQLP EEECCCEEEEECCHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCC LFYNHLNTGRPDPDNRVFNRYASNYLDESNEPLYPFGYGLSYTDFVYGDLQLSSETLPKN EEEHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCHHEEEEEEEECCCCCCCC GNLTASVTVTNKGNHDGYETVQIYLRDIYAEVARPVKELKGFDRIFLKKGESREVKFVLT CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEE EDDLKFYNSGLQYIYEPGEFDVMIGTNSRDVQTKRFIAE CCHHHHHHCCCCEEECCCCEEEEECCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]