| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347278
Identifier: 29347278
GI number: 29347278
Start: 2345567
End: 2347219
Strand: Reverse
Name: 29347278
Synonym: BT_1868
Alternate gene names: NA
Gene position: 2347219-2345567 (Counterclockwise)
Preceding gene: 29347281
Following gene: 29347277
Centisome position: 37.49
GC content: 32.91
Gene sequence:
>1653_bases ATGAAACATTTATCATATGTGTTAACACTAGTGCTAATATTTTTTGTAGCTTGTAGACGGCAACAATCAGTGTCTACTCC GTTAAATGCTGCAGAGCGAATACTCAAAGACAATCCGGATAGTGCTTTTCGTATTATACAAAGTATTCCTTATCCTGATA AACTGGATAAGGAAGATTTAGTGCGTTGGTGCTTGATAGCTGGTAAAGCTGCTGACAAATTGAATACGTCTCTTCCTCCT TCTTACTATTTCGATCATGCATATTCTTGGCTGATTAAATATGGAATAACTAAAGATCAAGTAGATATAGGGTTGTTTTG GGGGCGCTCTCTAGTGGCTGATGGGGAATATGATAAGGCAATGAGCATTTATGCAGAAGTATTGGCAATCGCAAAAGAGA AAGAACTATATAATGAAGCAGGCTATATATGTACGTATATAGCTGATCTATATGATTTTAGGGATATGCAAAAGGAGGCC AGACATCAATATGAAGAAGCTCAAGGACTGTTTAAGAAAGCGGGAAATATCAAAAGTCATGTATTTGCTTTACAAAATAT AGCTCGTGAATGGGCCTTTTTCGATTCTCTGGAATGTGCTTTAAAATATATGGGAATAGCGGATTCTATTGCCCAGCAGT TGAATGATAATGAGGTTAGCTCTTCTCTAGATAATGCTTTTGGTAACATTTATTTGGCAATGAACCAATACTCTAAAGCA GAATATCATTTCCTTAAATCAACATCTTTGGATAAAGAAAATGAATTGTATAATACAAACTGTCTGATCAAGCTATATCT GCAAGTAGGTGATATTTTAAAAGCTCGTGAGCTTTTGTATACACTACCTTTAGATAGCTCTGAATATGAATATGGTATAG AGCGGGCTTTTTATCGGGTAACTAAAGCGGAAGGTAGCTATAAAGAAGCACTTAAACATTTAGAAACATGTGAATCCATT AGTGACTCTATTACTATACTACAGAATAATACAAAAATACTGGAAGTAGAAAAGAAATTTAATAATTTGAGGCTTAAAGA AAAGAATCATCAATTGGAACTCACTCAGCAAAAGTATATGATTATAATTTGTATATGTTTGATTTTTGGTATAGCTATCA CATTACTCTATTTGCTGTACAGGCAAAAAACCAAAAATGAAATGAATAAGCAAGCCCTTGAGTTGAATAATATAAAACTA GAGTTGGCTAATGCCTTTATAGAGTTGGATAAAAAGAAAAATCAATTAGTGGTTTCGCAAAAAGAGAATGAAAGTAGTCA AAGTCGATTAGAAAATGAAATTAAAAACTTAACCTCTAATTATAAGAAATTGCAGCGAAGAAGAATTGTTACGTCAATAA TTTTTAGAAAATTAGTGAATATCGCTGAACGTAGTACGAATTGCAATGAACCATTACTAACGGAGCAATTATGGTTCTCT ATTGTTTCTGAAATAACAGAAACTTATCCGAATTTAAAAATGTATTTATTAGAACGATACCCAAATTTATCAAGTCAGGA ATGGGAATATTGTTGTTTATGCATGTTTAATTTTGATTCGAAAACCGAAGCTAGATTGCTTGGTATTAATCCTAGTTCAG TTTCTACAAAGCGATTAAGATTCAGACAAAAATTGGGAATCTCTGCTTTATAG
Upstream 100 bases:
>100_bases TGTGTTTTCAAGGGTTCAACGGAAAAATGGGAAAAGAATTTTTTATCCCCTCGTTTAACTTACTTGTTTGTTTTTTATTC ATATAAGCAAAACTATAATA
Downstream 100 bases:
>100_bases GAAGAAGCTAACTTGTGTGAGTACCTGATTAACGAGCTTTTAAAATAATCCTATTTAAGTAGTTCTTTTCTGAATAAGGC AATGCATGCTGCTATATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MKHLSYVLTLVLIFFVACRRQQSVSTPLNAAERILKDNPDSAFRIIQSIPYPDKLDKEDLVRWCLIAGKAADKLNTSLPP SYYFDHAYSWLIKYGITKDQVDIGLFWGRSLVADGEYDKAMSIYAEVLAIAKEKELYNEAGYICTYIADLYDFRDMQKEA RHQYEEAQGLFKKAGNIKSHVFALQNIAREWAFFDSLECALKYMGIADSIAQQLNDNEVSSSLDNAFGNIYLAMNQYSKA EYHFLKSTSLDKENELYNTNCLIKLYLQVGDILKARELLYTLPLDSSEYEYGIERAFYRVTKAEGSYKEALKHLETCESI SDSITILQNNTKILEVEKKFNNLRLKEKNHQLELTQQKYMIIICICLIFGIAITLLYLLYRQKTKNEMNKQALELNNIKL ELANAFIELDKKKNQLVVSQKENESSQSRLENEIKNLTSNYKKLQRRRIVTSIIFRKLVNIAERSTNCNEPLLTEQLWFS IVSEITETYPNLKMYLLERYPNLSSQEWEYCCLCMFNFDSKTEARLLGINPSSVSTKRLRFRQKLGISAL
Sequences:
>Translated_550_residues MKHLSYVLTLVLIFFVACRRQQSVSTPLNAAERILKDNPDSAFRIIQSIPYPDKLDKEDLVRWCLIAGKAADKLNTSLPP SYYFDHAYSWLIKYGITKDQVDIGLFWGRSLVADGEYDKAMSIYAEVLAIAKEKELYNEAGYICTYIADLYDFRDMQKEA RHQYEEAQGLFKKAGNIKSHVFALQNIAREWAFFDSLECALKYMGIADSIAQQLNDNEVSSSLDNAFGNIYLAMNQYSKA EYHFLKSTSLDKENELYNTNCLIKLYLQVGDILKARELLYTLPLDSSEYEYGIERAFYRVTKAEGSYKEALKHLETCESI SDSITILQNNTKILEVEKKFNNLRLKEKNHQLELTQQKYMIIICICLIFGIAITLLYLLYRQKTKNEMNKQALELNNIKL ELANAFIELDKKKNQLVVSQKENESSQSRLENEIKNLTSNYKKLQRRRIVTSIIFRKLVNIAERSTNCNEPLLTEQLWFS IVSEITETYPNLKMYLLERYPNLSSQEWEYCCLCMFNFDSKTEARLLGINPSSVSTKRLRFRQKLGISAL >Mature_550_residues MKHLSYVLTLVLIFFVACRRQQSVSTPLNAAERILKDNPDSAFRIIQSIPYPDKLDKEDLVRWCLIAGKAADKLNTSLPP SYYFDHAYSWLIKYGITKDQVDIGLFWGRSLVADGEYDKAMSIYAEVLAIAKEKELYNEAGYICTYIADLYDFRDMQKEA RHQYEEAQGLFKKAGNIKSHVFALQNIAREWAFFDSLECALKYMGIADSIAQQLNDNEVSSSLDNAFGNIYLAMNQYSKA EYHFLKSTSLDKENELYNTNCLIKLYLQVGDILKARELLYTLPLDSSEYEYGIERAFYRVTKAEGSYKEALKHLETCESI SDSITILQNNTKILEVEKKFNNLRLKEKNHQLELTQQKYMIIICICLIFGIAITLLYLLYRQKTKNEMNKQALELNNIKL ELANAFIELDKKKNQLVVSQKENESSQSRLENEIKNLTSNYKKLQRRRIVTSIIFRKLVNIAERSTNCNEPLLTEQLWFS IVSEITETYPNLKMYLLERYPNLSSQEWEYCCLCMFNFDSKTEARLLGINPSSVSTKRLRFRQKLGISAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63872; Mature: 63872
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLSYVLTLVLIFFVACRRQQSVSTPLNAAERILKDNPDSAFRIIQSIPYPDKLDKEDL CCHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHH VRWCLIAGKAADKLNTSLPPSYYFDHAYSWLIKYGITKDQVDIGLFWGRSLVADGEYDKA HHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHCCCCCHHHH MSIYAEVLAIAKEKELYNEAGYICTYIADLYDFRDMQKEARHQYEEAQGLFKKAGNIKSH HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VFALQNIAREWAFFDSLECALKYMGIADSIAQQLNDNEVSSSLDNAFGNIYLAMNQYSKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCCCCH EYHFLKSTSLDKENELYNTNCLIKLYLQVGDILKARELLYTLPLDSSEYEYGIERAFYRV HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHH TKAEGSYKEALKHLETCESISDSITILQNNTKILEVEKKFNNLRLKEKNHQLELTQQKYM HHCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEHHHHCCCCEECCCCCEEEHHHHHH IIICICLIFGIAITLLYLLYRQKTKNEMNKQALELNNIKLELANAFIELDKKKNQLVVSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEC KENESSQSRLENEIKNLTSNYKKLQRRRIVTSIIFRKLVNIAERSTNCNEPLLTEQLWFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH IVSEITETYPNLKMYLLERYPNLSSQEWEYCCLCMFNFDSKTEARLLGINPSSVSTKRLR HHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCHHHHHH FRQKLGISAL HHHHCCCCCC >Mature Secondary Structure MKHLSYVLTLVLIFFVACRRQQSVSTPLNAAERILKDNPDSAFRIIQSIPYPDKLDKEDL CCHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHH VRWCLIAGKAADKLNTSLPPSYYFDHAYSWLIKYGITKDQVDIGLFWGRSLVADGEYDKA HHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHCCCCCHHHH MSIYAEVLAIAKEKELYNEAGYICTYIADLYDFRDMQKEARHQYEEAQGLFKKAGNIKSH HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VFALQNIAREWAFFDSLECALKYMGIADSIAQQLNDNEVSSSLDNAFGNIYLAMNQYSKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCCCCH EYHFLKSTSLDKENELYNTNCLIKLYLQVGDILKARELLYTLPLDSSEYEYGIERAFYRV HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHH TKAEGSYKEALKHLETCESISDSITILQNNTKILEVEKKFNNLRLKEKNHQLELTQQKYM HHCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEHHHHCCCCEECCCCCEEEHHHHHH IIICICLIFGIAITLLYLLYRQKTKNEMNKQALELNNIKLELANAFIELDKKKNQLVVSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEC KENESSQSRLENEIKNLTSNYKKLQRRRIVTSIIFRKLVNIAERSTNCNEPLLTEQLWFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH IVSEITETYPNLKMYLLERYPNLSSQEWEYCCLCMFNFDSKTEARLLGINPSSVSTKRLR HHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCHHHHHH FRQKLGISAL HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA