| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347272
Identifier: 29347272
GI number: 29347272
Start: 2336597
End: 2336839
Strand: Reverse
Name: 29347272
Synonym: BT_1862
Alternate gene names: NA
Gene position: 2336839-2336597 (Counterclockwise)
Preceding gene: 29347274
Following gene: 29347271
Centisome position: 37.33
GC content: 41.15
Gene sequence:
>243_bases ATGAAAACAAAACTTTTTTTGGCTGCTGTAGCAGTAACATTTTCTTTCGCTGTGATCTCTTGTTCTGGTAACAAAGCTAA TAACGCTGCCGCTTCTGAAGGTGAAGAAGCAACAGTTGAAACTGTAGAAGCTGTTGCTGTTGAAGCAACTGACTCTTGCT GCCAGGCGAAAGACTCTTGTGCTACTGCTTGCGATAAGAAAGCTGATTGCACAGAAAAGAAGGAATGCTGTGATAAAAAG TAA
Upstream 100 bases:
>100_bases ATTGACTGGCGGGGATTTCTTGTTTTGGCAGTTTAGGAAAAAATAGCTATATTTGCCGACGACAATTATTTTATTAAACG TTTAAAGCAAATTAAAAGGT
Downstream 100 bases:
>100_bases TCTATTGATTTAGAACGATAAATTAAAAGGGGGTATAGTGTGTCCGCACTATGCCCCCTTTTTCTGTTTGATGAAATACG GAGCTTTATTAGTAATACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MKTKLFLAAVAVTFSFAVISCSGNKANNAAASEGEEATVETVEAVAVEATDSCCQAKDSCATACDKKADCTEKKECCDKK
Sequences:
>Translated_80_residues MKTKLFLAAVAVTFSFAVISCSGNKANNAAASEGEEATVETVEAVAVEATDSCCQAKDSCATACDKKADCTEKKECCDKK >Mature_80_residues MKTKLFLAAVAVTFSFAVISCSGNKANNAAASEGEEATVETVEAVAVEATDSCCQAKDSCATACDKKADCTEKKECCDKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8291; Mature: 8291
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 11.2 %Cys+Met (Translated Protein) 10.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 11.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKLFLAAVAVTFSFAVISCSGNKANNAAASEGEEATVETVEAVAVEATDSCCQAKDSC CCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH ATACDKKADCTEKKECCDKK HHHCCCCCCCCCHHHHCCCC >Mature Secondary Structure MKTKLFLAAVAVTFSFAVISCSGNKANNAAASEGEEATVETVEAVAVEATDSCCQAKDSC CCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH ATACDKKADCTEKKECCDKK HHHCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA