| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347255
Identifier: 29347255
GI number: 29347255
Start: 2316702
End: 2317367
Strand: Reverse
Name: 29347255
Synonym: BT_1845
Alternate gene names: NA
Gene position: 2317367-2316702 (Counterclockwise)
Preceding gene: 29347256
Following gene: 29347254
Centisome position: 37.02
GC content: 45.35
Gene sequence:
>666_bases ATGGATATAAAAGAACAACTGAAGGATATCAAAACACAGCTCCGTCTCTCTATGAACGGGGCTGTGTCCCAAAGTATGCG TGAGAAGGGATTGGTATACAAACTCAATTTCGGAGTCGAAATCCCCCGCATAAAGATGATTGCCGAAGGGTATGAAAAGA ACCATGACCTGGCGCAGGCATTGTGGAAAGAAGACATTCGCGAATGCAAAATCATGGCAGCCATGTTGCAGCCTGTGGAT ACCTTTTATCCCGAAATAGCTGATATCTGGGTAGAAAGTATCCGTAACATAGAGATTGCGGAACTGACCTGTATGAATCT TTTCCAGCATTTGCCGTATGCCCCTGCTAAATCTTTTCATTGGATGGCTGATGAACAGGAATATGTGCAGACTTGCGGTT TCCTGACGGCTGCCCGTCTTTTGATGAAAAAGGGAGATATGACAGAAAGAGCCTCCGGCGAATTGCTCGATCAGGCACTT TGCGCTGTTCATTCAGAAAGCTATCATGTGCGGAATGCAGCTCTTCTGGCTATCCGTAAGTATATGCAGCATAACGAAGA ACACGCTTTCCGTGTTTGCCGGATGGTTGAAGGAATGGCAGATTCCACAGTGGAAGCGGAGCAGATGCTCTATAATATGG TAAAAGAAGAAGTGGAGAATAAGTAA
Upstream 100 bases:
>100_bases CGGACGTTACCGTGTCTTATAATGAAGACTATGTAGAACAAATGTTGCGCTACAGCAAAGATTATTCTCCGTTGCCTTCC GTAAATAATTAATATTGAAA
Downstream 100 bases:
>100_bases TAGGTAATAAGTAATAGGTAATACCATGCGGGCATTCGCCGGATGGAATTTTAAGTAACTACGGTTATTACCTATTACCT ATTACTTATTACTTATTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MDIKEQLKDIKTQLRLSMNGAVSQSMREKGLVYKLNFGVEIPRIKMIAEGYEKNHDLAQALWKEDIRECKIMAAMLQPVD TFYPEIADIWVESIRNIEIAELTCMNLFQHLPYAPAKSFHWMADEQEYVQTCGFLTAARLLMKKGDMTERASGELLDQAL CAVHSESYHVRNAALLAIRKYMQHNEEHAFRVCRMVEGMADSTVEAEQMLYNMVKEEVENK
Sequences:
>Translated_221_residues MDIKEQLKDIKTQLRLSMNGAVSQSMREKGLVYKLNFGVEIPRIKMIAEGYEKNHDLAQALWKEDIRECKIMAAMLQPVD TFYPEIADIWVESIRNIEIAELTCMNLFQHLPYAPAKSFHWMADEQEYVQTCGFLTAARLLMKKGDMTERASGELLDQAL CAVHSESYHVRNAALLAIRKYMQHNEEHAFRVCRMVEGMADSTVEAEQMLYNMVKEEVENK >Mature_221_residues MDIKEQLKDIKTQLRLSMNGAVSQSMREKGLVYKLNFGVEIPRIKMIAEGYEKNHDLAQALWKEDIRECKIMAAMLQPVD TFYPEIADIWVESIRNIEIAELTCMNLFQHLPYAPAKSFHWMADEQEYVQTCGFLTAARLLMKKGDMTERASGELLDQAL CAVHSESYHVRNAALLAIRKYMQHNEEHAFRVCRMVEGMADSTVEAEQMLYNMVKEEVENK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25556; Mature: 25556
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIKEQLKDIKTQLRLSMNGAVSQSMREKGLVYKLNFGVEIPRIKMIAEGYEKNHDLAQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHH LWKEDIRECKIMAAMLQPVDTFYPEIADIWVESIRNIEIAELTCMNLFQHLPYAPAKSFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC WMADEQEYVQTCGFLTAARLLMKKGDMTERASGELLDQALCAVHSESYHVRNAALLAIRK CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YMQHNEEHAFRVCRMVEGMADSTVEAEQMLYNMVKEEVENK HHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDIKEQLKDIKTQLRLSMNGAVSQSMREKGLVYKLNFGVEIPRIKMIAEGYEKNHDLAQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHH LWKEDIRECKIMAAMLQPVDTFYPEIADIWVESIRNIEIAELTCMNLFQHLPYAPAKSFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC WMADEQEYVQTCGFLTAARLLMKKGDMTERASGELLDQALCAVHSESYHVRNAALLAIRK CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YMQHNEEHAFRVCRMVEGMADSTVEAEQMLYNMVKEEVENK HHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA