| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is sacC [H]
Identifier: 29347175
GI number: 29347175
Start: 2184204
End: 2186087
Strand: Reverse
Name: sacC [H]
Synonym: BT_1765
Alternate gene names: 29347175
Gene position: 2186087-2184204 (Counterclockwise)
Preceding gene: 29347176
Following gene: 29347173
Centisome position: 34.92
GC content: 44.21
Gene sequence:
>1884_bases ATGAAAACAACTCCTTGGATAAAACTGTGTAAAGGTGCCGTACTCGCACTGACTGTCTCCTTTGGACTGACCTATTGCCA GTCGACCAAAAGCACGTTCACTCTTGAACAGAAAGGTGATAGCCTTACTATTGTCCATATTACTCATCCTACTAATTATA TATTACTCCCCATCGAAGAAGAAGAAGCCGACGAAAGTCAGGTGCGTCTTGATACGGGGAATGCAGCGGATACCGATATG GATATCCGCCTGGCACAGACTAAGGTCGATTATTTCGTTCCTTTTGCTTTGCCGGCTGATACAAAGGTAGCCACTTTACG CATTCAAAAGAAATCGAAAGACGCCCTCTGCTGGGAAGAAATCAAATTATCCGATACGTTTGATACTACCAATACGGATA AATTCCGTCCTGTCTACCATCATACTCCCCTTTATGGCTGGATGAATGATGCAAACGGATTGGTATATAAAGATGGAGAG TATCATTTGTATTATCAGTATAACCCTTATGGCTCCAAATGGGGAAATATGCACTGGGGACATTCGGTCAGCAAAGACCT GATGCATTGGGAACATTTGGCTCCTGCCATTGCCCGTGATACATTAGGGCATATCTTTTCCGGTAGTTCTATTGTCGATC AGGAGAATGTGGCGGGCTACGGAGCAGGTTCCATCCTCGCTTACTATACTTCTGCCAGCGATAAGAACGGACAGATTCAG TGTCTGGCTTATAGCAAAGACAACGGACGGACATTTACTAAATACGAAAAGAATCCTGTTCTGCGTCCTTCCGATGGTCT GAAAGATTTCCGTGACCCGAAAGTCTTCTGGTATGCACCGGAGAGTAAATGGGTGATGATTGTCTCTGCCGATAAGGAAA TGCGTTTCTATGACTCCCATAATCTGAAAGACTGGAACTACCTGAGTAGCTTTGGCGAAGGATACGGTGTGCAACCCTGT CAGTTTGAATGTCCGGATATGGTGGAACTTCCTGTAGACGGCGATATCAACTATAAGAAATGGGCATTGATTGTCAATGT AAATCCGGGATGTTACTTCGGAGGGAGTGCTACTCAATATTTTATCGGTGACTTTGACGGCACAAAATTTATTTGTGATA ATCAGCCGAATGTCACAAAATGGCTGGACTGGGGGAAAGATCACTATGCTACTGTCTGTTTCTCAAATACGGGAGACCGT GTGGTGGCAGTGCCTTGGATGAGCAACTGGCAGTATTGCAATATCGTTCCGACCCGGCAGTTCCGTAGTGCCAATGCACT GCCCCGTGAATTGGGACTCTATACACAGGACAATGATATTTATCTTTCCGCCGCACCGGTAGCGGAAACTAAGAACTTAC GAAAAGAAAGCAAGGATGTTCCGTCCTTCACGGTAGACAAGGATTATCACATCGAATCTTTATTGACTGATAATGAAGGA GCTTATGAGCTTTCTCTGAACATCGAAGCTGGAAAGGCGGAAATTATGGGATTCAGTCTTTTCAATGACAAGGGAGAGAA GGTGGATATTTATTTTAATCTTCCGGAAAAGAAACTGGTGATGGACCGTACGAAAAGCGGCATCGTAGATTTCGGGAAAA ACAGCTCTCCGCACGAGATCGAGGCGCACGACCGCCGGAAGACGACTTCTATCAATTATATAGATGATTTCGCATTGGCT ACATGGGCACCTATCCAGAAGGAAAATGAATACAAACTGGATGTCTTTGTTGATAAGTGTTCGGTAGAAATATTTCTGGA TGGCGGGAAGATAGCGATGACTAATCTGATTTTCCCTACAGAGCCATACAATCGTATGTGTTTTTACAGTAAGGGCGGTA CATTCGCAGTCGATTCATTTAGTGTGTATAGATTAGGTTTATAA
Upstream 100 bases:
>100_bases TCTTTGAAACAAAGTTTATAGACGAAGGTGAAGATACCCCCTATCTTTGCCTCCGTCAATTTTTGATTAACACTAGTATA ACTCTGAATATCCTGTTACC
Downstream 100 bases:
>100_bases AAGGATGGATTTATTTTTCAATAGGTATTTATCAAGGATATAATCAATTGTTTATCACTTGTATAATCAGTATTTCATAG ATTGGATTTATGAGTTAGTT
Product: 2,6-beta-D-fructofuranosidase
Products: NA
Alternate protein names: Beta-D-fructofuranosidase; Exo-beta-D-fructosidase; Exo-levanase [H]
Number of amino acids: Translated: 627; Mature: 627
Protein sequence:
>627_residues MKTTPWIKLCKGAVLALTVSFGLTYCQSTKSTFTLEQKGDSLTIVHITHPTNYILLPIEEEEADESQVRLDTGNAADTDM DIRLAQTKVDYFVPFALPADTKVATLRIQKKSKDALCWEEIKLSDTFDTTNTDKFRPVYHHTPLYGWMNDANGLVYKDGE YHLYYQYNPYGSKWGNMHWGHSVSKDLMHWEHLAPAIARDTLGHIFSGSSIVDQENVAGYGAGSILAYYTSASDKNGQIQ CLAYSKDNGRTFTKYEKNPVLRPSDGLKDFRDPKVFWYAPESKWVMIVSADKEMRFYDSHNLKDWNYLSSFGEGYGVQPC QFECPDMVELPVDGDINYKKWALIVNVNPGCYFGGSATQYFIGDFDGTKFICDNQPNVTKWLDWGKDHYATVCFSNTGDR VVAVPWMSNWQYCNIVPTRQFRSANALPRELGLYTQDNDIYLSAAPVAETKNLRKESKDVPSFTVDKDYHIESLLTDNEG AYELSLNIEAGKAEIMGFSLFNDKGEKVDIYFNLPEKKLVMDRTKSGIVDFGKNSSPHEIEAHDRRKTTSINYIDDFALA TWAPIQKENEYKLDVFVDKCSVEIFLDGGKIAMTNLIFPTEPYNRMCFYSKGGTFAVDSFSVYRLGL
Sequences:
>Translated_627_residues MKTTPWIKLCKGAVLALTVSFGLTYCQSTKSTFTLEQKGDSLTIVHITHPTNYILLPIEEEEADESQVRLDTGNAADTDM DIRLAQTKVDYFVPFALPADTKVATLRIQKKSKDALCWEEIKLSDTFDTTNTDKFRPVYHHTPLYGWMNDANGLVYKDGE YHLYYQYNPYGSKWGNMHWGHSVSKDLMHWEHLAPAIARDTLGHIFSGSSIVDQENVAGYGAGSILAYYTSASDKNGQIQ CLAYSKDNGRTFTKYEKNPVLRPSDGLKDFRDPKVFWYAPESKWVMIVSADKEMRFYDSHNLKDWNYLSSFGEGYGVQPC QFECPDMVELPVDGDINYKKWALIVNVNPGCYFGGSATQYFIGDFDGTKFICDNQPNVTKWLDWGKDHYATVCFSNTGDR VVAVPWMSNWQYCNIVPTRQFRSANALPRELGLYTQDNDIYLSAAPVAETKNLRKESKDVPSFTVDKDYHIESLLTDNEG AYELSLNIEAGKAEIMGFSLFNDKGEKVDIYFNLPEKKLVMDRTKSGIVDFGKNSSPHEIEAHDRRKTTSINYIDDFALA TWAPIQKENEYKLDVFVDKCSVEIFLDGGKIAMTNLIFPTEPYNRMCFYSKGGTFAVDSFSVYRLGL >Mature_627_residues MKTTPWIKLCKGAVLALTVSFGLTYCQSTKSTFTLEQKGDSLTIVHITHPTNYILLPIEEEEADESQVRLDTGNAADTDM DIRLAQTKVDYFVPFALPADTKVATLRIQKKSKDALCWEEIKLSDTFDTTNTDKFRPVYHHTPLYGWMNDANGLVYKDGE YHLYYQYNPYGSKWGNMHWGHSVSKDLMHWEHLAPAIARDTLGHIFSGSSIVDQENVAGYGAGSILAYYTSASDKNGQIQ CLAYSKDNGRTFTKYEKNPVLRPSDGLKDFRDPKVFWYAPESKWVMIVSADKEMRFYDSHNLKDWNYLSSFGEGYGVQPC QFECPDMVELPVDGDINYKKWALIVNVNPGCYFGGSATQYFIGDFDGTKFICDNQPNVTKWLDWGKDHYATVCFSNTGDR VVAVPWMSNWQYCNIVPTRQFRSANALPRELGLYTQDNDIYLSAAPVAETKNLRKESKDVPSFTVDKDYHIESLLTDNEG AYELSLNIEAGKAEIMGFSLFNDKGEKVDIYFNLPEKKLVMDRTKSGIVDFGKNSSPHEIEAHDRRKTTSINYIDDFALA TWAPIQKENEYKLDVFVDKCSVEIFLDGGKIAMTNLIFPTEPYNRMCFYSKGGTFAVDSFSVYRLGL
Specific function: Exo-fructosidase that can hydrolyze both levan and inulin, leading to the production of free fructose. Is also able to hydrolyze sucrose and to a small extent raffinose, but not melezitose, stachylose, cellobiose, maltose, and lactose [H]
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 32 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322029, Length=507, Percent_Identity=34.5167652859961, Blast_Score=249, Evalue=9e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR010496 - InterPro: IPR001362 - InterPro: IPR018053 - InterPro: IPR013189 - InterPro: IPR013148 - InterPro: IPR011040 [H]
Pfam domain/function: PF06439 DUF1080; PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]
EC number: =3.2.1.80 [H]
Molecular weight: Translated: 71276; Mature: 71276
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTPWIKLCKGAVLALTVSFGLTYCQSTKSTFTLEQKGDSLTIVHITHPTNYILLPIEE CCCCCHHHHHCCEEEEEEEEHHHEEECCCCCEEEEEECCCEEEEEEEECCCCEEEEEECC EEADESQVRLDTGNAADTDMDIRLAQTKVDYFVPFALPADTKVATLRIQKKSKDALCWEE CCCCCCEEEEECCCCCCCCEEEEEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCEE IKLSDTFDTTNTDKFRPVYHHTPLYGWMNDANGLVYKDGEYHLYYQYNPYGSKWGNMHWG EEECCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEECCCEEEEEEECCCCCCCCCCCCC HSVSKDLMHWEHLAPAIARDTLGHIFSGSSIVDQENVAGYGAGSILAYYTSASDKNGQIQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCEEE CLAYSKDNGRTFTKYEKNPVLRPSDGLKDFRDPKVFWYAPESKWVMIVSADKEMRFYDSH EEEEECCCCCEEEEECCCCCCCCCCCCHHCCCCEEEEECCCCCEEEEEECCCCEEEECCC NLKDWNYLSSFGEGYGVQPCQFECPDMVELPVDGDINYKKWALIVNVNPGCYFGGSATQY CCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCEEECCCCCEE FIGDFDGTKFICDNQPNVTKWLDWGKDHYATVCFSNTGDRVVAVPWMSNWQYCNIVPTRQ EEECCCCCEEEECCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEECHH FRSANALPRELGLYTQDNDIYLSAAPVAETKNLRKESKDVPSFTVDKDYHIESLLTDNEG CCCCCCCHHHHCCEECCCCEEEEECCCHHHHHHHHHHCCCCCEECCCCCEEEEEEECCCC AYELSLNIEAGKAEIMGFSLFNDKGEKVDIYFNLPEKKLVMDRTKSGIVDFGKNSSPHEI CEEEEEEEECCCEEEEEEEEECCCCCEEEEEEECCCHHEEHHCCCCCCEECCCCCCCCCC EAHDRRKTTSINYIDDFALATWAPIQKENEYKLDVFVDKCSVEIFLDGGKIAMTNLIFPT CCCCCCCCCCCCEECCCHHHEECCCCCCCCEEEEEEEEEEEEEEEEECCEEEEEEEEECC EPYNRMCFYSKGGTFAVDSFSVYRLGL CCCCCEEEEECCCCEEEECEEEEEECC >Mature Secondary Structure MKTTPWIKLCKGAVLALTVSFGLTYCQSTKSTFTLEQKGDSLTIVHITHPTNYILLPIEE CCCCCHHHHHCCEEEEEEEEHHHEEECCCCCEEEEEECCCEEEEEEEECCCCEEEEEECC EEADESQVRLDTGNAADTDMDIRLAQTKVDYFVPFALPADTKVATLRIQKKSKDALCWEE CCCCCCEEEEECCCCCCCCEEEEEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCEE IKLSDTFDTTNTDKFRPVYHHTPLYGWMNDANGLVYKDGEYHLYYQYNPYGSKWGNMHWG EEECCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEECCCEEEEEEECCCCCCCCCCCCC HSVSKDLMHWEHLAPAIARDTLGHIFSGSSIVDQENVAGYGAGSILAYYTSASDKNGQIQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCEEE CLAYSKDNGRTFTKYEKNPVLRPSDGLKDFRDPKVFWYAPESKWVMIVSADKEMRFYDSH EEEEECCCCCEEEEECCCCCCCCCCCCHHCCCCEEEEECCCCCEEEEEECCCCEEEECCC NLKDWNYLSSFGEGYGVQPCQFECPDMVELPVDGDINYKKWALIVNVNPGCYFGGSATQY CCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCEEECCCCCEE FIGDFDGTKFICDNQPNVTKWLDWGKDHYATVCFSNTGDRVVAVPWMSNWQYCNIVPTRQ EEECCCCCEEEECCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEECHH FRSANALPRELGLYTQDNDIYLSAAPVAETKNLRKESKDVPSFTVDKDYHIESLLTDNEG CCCCCCCHHHHCCEECCCCEEEEECCCHHHHHHHHHHCCCCCEECCCCCEEEEEEECCCC AYELSLNIEAGKAEIMGFSLFNDKGEKVDIYFNLPEKKLVMDRTKSGIVDFGKNSSPHEI CEEEEEEEECCCEEEEEEEEECCCCCEEEEEEECCCHHEEHHCCCCCCEECCCCCCCCCC EAHDRRKTTSINYIDDFALATWAPIQKENEYKLDVFVDKCSVEIFLDGGKIAMTNLIFPT CCCCCCCCCCCCEECCCHHHEECCCCCCCCEEEEEEEEEEEEEEEEECCEEEEEEEEECC EPYNRMCFYSKGGTFAVDSFSVYRLGL CCCCCEEEEECCCCEEEECEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3112519; 3120151; 9141695; 9384377; 2117666 [H]