| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is scrK [H]
Identifier: 29347167
GI number: 29347167
Start: 2170630
End: 2171517
Strand: Reverse
Name: scrK [H]
Synonym: BT_1757
Alternate gene names: 29347167
Gene position: 2171517-2170630 (Counterclockwise)
Preceding gene: 29347168
Following gene: 29347165
Centisome position: 34.69
GC content: 46.96
Gene sequence:
>888_bases ATGAATAATATAATTGTAGGAATGGGCGAAGCATTATGGGATGTATTGCCCGAAGGAAAGAAGATAGGCGGTGCTCCGGC TAATTTCGCTTATCATGTTTCACAGTTTGGTTTCGACAGCCGTGTAGTAAGTGCGGTGGGCAATGACGAACTGGGAGATG AAATCATGGAAGTATTCAAAGAAAAGCAACTCAAAAATCAGATTGAGCGGGTGGATTATCCTACCGGTACGGTGCAGGTG ACACTGGATGACGAAGGGGTGCCTTGCTACGAAATCAAAGAAGGAGTGGCATGGGATAACATTCCTTTCACGGACGAACT GAAGCGGCTGGCTTTGAATACGCGCGCCGTTTGTTTCGGTTCGTTGGCTCAACGCAATGAAGTGAGCCGTGCTACAATTA ACCGATTCCTCGATACAATGCCCGATATAGACGGACAGCTGAAGATATTCGACATCAACCTCCGTCAGGACTTCTACACG AAAGAAGTATTGCGCGAGTCTTTCAAACGCTGCAACATTCTGAAGATAAACGATGAAGAACTGGTGACAATCAGCCGTAT GTTCGGTTATCCGGGCATCGACTTACAGGATAAGTGCTGGATTCTGTTGGCCAAGTACAATCTGAAAATGTTGATTCTTA CTTGCGGTATCAATGGTAGTTATGTGTTTACTCCGGGAGTCGTTTCTTTTCAGGAAACGCCGAAGGTTCCGGTAGCCGAT ACGGTAGGAGCGGGGGATTCCTTTACTGCCGCTTTCTGTGCTTCCATTCTGAATGGCAAGTCTGTTCCCGAAGCTCATAA GCTGGCTGTCGAAGTTTCCGCTTATGTTTGTACGCAGAGCGGTGCAATGCCCGAACTTCCGGTTATTCTGAAAGACAGAT TGTTGTAG
Upstream 100 bases:
>100_bases GCGATTGCTGTGATGACAGTCGGTGTACTTTACTTGCTGTTCTATACCTTCCGTATCAAAAAATAATTTTATATTTGGAA AACAATTAAATCTGTAGATC
Downstream 100 bases:
>100_bases AATCTCTTTAAATTCAAAAAGAAGGTGAATTCTAAGTCCTCTCCAAACAATATCTATAAAATCTTACCCAAGTTTACGAA CATTAACGTATCCTTGGGTA
Product: fructokinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MNNIIVGMGEALWDVLPEGKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQLKNQIERVDYPTGTVQV TLDDEGVPCYEIKEGVAWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYT KEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVAD TVGAGDSFTAAFCASILNGKSVPEAHKLAVEVSAYVCTQSGAMPELPVILKDRLL
Sequences:
>Translated_295_residues MNNIIVGMGEALWDVLPEGKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQLKNQIERVDYPTGTVQV TLDDEGVPCYEIKEGVAWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYT KEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVAD TVGAGDSFTAAFCASILNGKSVPEAHKLAVEVSAYVCTQSGAMPELPVILKDRLL >Mature_295_residues MNNIIVGMGEALWDVLPEGKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQLKNQIERVDYPTGTVQV TLDDEGVPCYEIKEGVAWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYT KEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVAD TVGAGDSFTAAFCASILNGKSVPEAHKLAVEVSAYVCTQSGAMPELPVILKDRLL
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 32733; Mature: 32733
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIIVGMGEALWDVLPEGKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFK CCCEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHH EKQLKNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFTDELKRLALNTRAVCFG HHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHH SLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYTKEVLRESFKRCNILKINDEE HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEEECCCH LVTISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVAD HEEHHHHHCCCCCCCCCCEEEEEEECCEEEEEEEECCCCCEEECCCEEECCCCCCCCCCC TVGAGDSFTAAFCASILNGKSVPEAHKLAVEVSAYVCTQSGAMPELPVILKDRLL CCCCCCCHHHHHHHHHHCCCCCCHHHHHEEEEEEEEEECCCCCCCCCHHHHCCCC >Mature Secondary Structure MNNIIVGMGEALWDVLPEGKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFK CCCEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHH EKQLKNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFTDELKRLALNTRAVCFG HHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHH SLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYTKEVLRESFKRCNILKINDEE HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEEECCCH LVTISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVAD HEEHHHHHCCCCCCCCCCEEEEEEECCEEEEEEEECCCCCEEECCCEEECCCCCCCCCCC TVGAGDSFTAAFCASILNGKSVPEAHKLAVEVSAYVCTQSGAMPELPVILKDRLL CCCCCCCHHHHHHHHHHCCCCCCHHHHHEEEEEEEEEECCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1809835 [H]