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The map label for this gene is ybaZ [H]

Identifier: 29347163

GI number: 29347163

Start: 2164399

End: 2164731

Strand: Reverse

Name: ybaZ [H]

Synonym: BT_1753

Alternate gene names: 29347163

Gene position: 2164731-2164399 (Counterclockwise)

Preceding gene: 29347164

Following gene: 29347161

Centisome position: 34.58

GC content: 45.35

Gene sequence:

>333_bases
ATGAAAGATTATAAAGTAGATAAAGAGAGCTTTTCCGAATCCTTTCGGAAGGAAGTGTACGAAGTCGTATCCCAGATACC
TGTGGGAAAAGTATCTACTTATGGAGGTATTGCTTTGCTGTTGGGGGCACCCCAATGCTCGCGGATGGTGGGACGTGCAT
TGAAAGAAGTGCCGGATGAATTATCCATTCCCTGCCATAGAGTTGTAAATTCCACCGGAAGGCTGGTGCCCGGTTGGGTG
GAACAAAAACAACTCTTGCTGGCAGAAGAAGTTTCTTTCAAAGCTAACGGATGCGTTAATCTGAAAGAACATTTGTGGCA
CGTGGATGAATGA

Upstream 100 bases:

>100_bases
TTCTTATTTCGCCAAGTGCTATAAAGAGCAGTTTGGAGAGAGCCCGACAGATTTCCTGAAAAGGAAAGGATGATTTCATT
GATATCGTAAAGAGGGATAT

Downstream 100 bases:

>100_bases
AGGATGCAAGGAAGGTAAGCCATATCATCCGTATCCATACAATAAAGAAAACCCATACATGAAGCCATAAGGTCCTGGTA
ATGAAATCTCTGATGGGTAC

Product: putative methylated-DNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MKDYKVDKESFSESFRKEVYEVVSQIPVGKVSTYGGIALLLGAPQCSRMVGRALKEVPDELSIPCHRVVNSTGRLVPGWV
EQKQLLLAEEVSFKANGCVNLKEHLWHVDE

Sequences:

>Translated_110_residues
MKDYKVDKESFSESFRKEVYEVVSQIPVGKVSTYGGIALLLGAPQCSRMVGRALKEVPDELSIPCHRVVNSTGRLVPGWV
EQKQLLLAEEVSFKANGCVNLKEHLWHVDE
>Mature_110_residues
MKDYKVDKESFSESFRKEVYEVVSQIPVGKVSTYGGIALLLGAPQCSRMVGRALKEVPDELSIPCHRVVNSTGRLVPGWV
EQKQLLLAEEVSFKANGCVNLKEHLWHVDE

Specific function: Unknown

COG id: COG3695

COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MGMT family [H]

Homologues:

Organism=Escherichia coli, GI1786659, Length=109, Percent_Identity=38.5321100917431, Blast_Score=80, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014048
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01035 DNA_binding_1 [H]

EC number: NA

Molecular weight: Translated: 12329; Mature: 12329

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS00374 MGMT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDYKVDKESFSESFRKEVYEVVSQIPVGKVSTYGGIALLLGAPQCSRMVGRALKEVPDE
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCHH
LSIPCHRVVNSTGRLVPGWVEQKQLLLAEEVSFKANGCVNLKEHLWHVDE
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MKDYKVDKESFSESFRKEVYEVVSQIPVGKVSTYGGIALLLGAPQCSRMVGRALKEVPDE
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCHH
LSIPCHRVVNSTGRLVPGWVEQKQLLLAEEVSFKANGCVNLKEHLWHVDE
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]