| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is yahN [C]
Identifier: 29347142
GI number: 29347142
Start: 2130601
End: 2131254
Strand: Reverse
Name: yahN [C]
Synonym: BT_1732
Alternate gene names: 29347142
Gene position: 2131254-2130601 (Counterclockwise)
Preceding gene: 29347147
Following gene: 29347141
Centisome position: 34.04
GC content: 44.65
Gene sequence:
>654_bases ATGATTCAGATTGAAACAATATTCGATATAATAGTGAAAGGCTTTATTATAGGCGTTGTTGTGTCCGCACCTCTCGGACC GGTGGGGGTTCTCTGCATTCAGAGGACGCTGAATAAAGGGCGCTGGTATGGATTTGTGACAGGGCTTGGAGCCTCATTAA GCGACATAGCTTATGCTCTGTTGACAGGTTATGGTATGAGCTTTGTGTTCGATTATATTAATAAGAATATTTTTTATCTG CAGTTGTTGGGCAGCATCATGCTGCTACTTTTCGGAATCTATACCTTTCGCAGCAATCCGGTACAATCCATCCGTCCGGC ATCGTCCAATAAAGGTTCTTACTTTCACAATTTCATTACCGCATTCTTTGTCACGCTCTCCAATCCTCTGATTATATTCC TGTTTATCGGACTATTTGCCCGTTTTGCCTTTGTGCAGCCCGGTGTCGTGGTGTTCGAAGAAATTACGGGGTATCTTGCC ATTGCTTCGGGGGCGCTGGTGTGGTGGCTCGGAATCACTTATTTTGTGAATAAAGTGCGCACTAAGTTTAACTTACGGGG CATCTGGATACTGAATCGTGTGATTGGCAGCATTGTGATGCTGGTGTCGGTGGCGGGATTAATCTATACGTTGCTGGGAG AGTCACTTTATTAA
Upstream 100 bases:
>100_bases TGGCGCAAAGATAAGCAATTTTGGTGTATATAGTGACTCTTGTGTGGAAAAAACGTTAATATCCTATCCTCTTCTCATAA AAAAGTGCGATATTTGCGGC
Downstream 100 bases:
>100_bases GAAGAAAACTTATGAATCAGATAGCCAGACAGCTTAAAGAGAAAAACATTGCCGAGTACCTTATATATATGTGGCAAGAA GAAGACCTGATCCGCGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Lysine Exporter Protein; Amino Acid Exporter; Translocator Protein LysE Family; LysE Family Translocator Protein; Amino Acid Transporter LysE Family; Transporter Protein; Aminoacid Exporter; LysE-Like Exporter; Translocator Protein LysE Family Protein; Threonine Efflux Protein
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MIQIETIFDIIVKGFIIGVVVSAPLGPVGVLCIQRTLNKGRWYGFVTGLGASLSDIAYALLTGYGMSFVFDYINKNIFYL QLLGSIMLLLFGIYTFRSNPVQSIRPASSNKGSYFHNFITAFFVTLSNPLIIFLFIGLFARFAFVQPGVVVFEEITGYLA IASGALVWWLGITYFVNKVRTKFNLRGIWILNRVIGSIVMLVSVAGLIYTLLGESLY
Sequences:
>Translated_217_residues MIQIETIFDIIVKGFIIGVVVSAPLGPVGVLCIQRTLNKGRWYGFVTGLGASLSDIAYALLTGYGMSFVFDYINKNIFYL QLLGSIMLLLFGIYTFRSNPVQSIRPASSNKGSYFHNFITAFFVTLSNPLIIFLFIGLFARFAFVQPGVVVFEEITGYLA IASGALVWWLGITYFVNKVRTKFNLRGIWILNRVIGSIVMLVSVAGLIYTLLGESLY >Mature_217_residues MIQIETIFDIIVKGFIIGVVVSAPLGPVGVLCIQRTLNKGRWYGFVTGLGASLSDIAYALLTGYGMSFVFDYINKNIFYL QLLGSIMLLLFGIYTFRSNPVQSIRPASSNKGSYFHNFITAFFVTLSNPLIIFLFIGLFARFAFVQPGVVVFEEITGYLA IASGALVWWLGITYFVNKVRTKFNLRGIWILNRVIGSIVMLVSVAGLIYTLLGESLY
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24117; Mature: 24117
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQIETIFDIIVKGFIIGVVVSAPLGPVGVLCIQRTLNKGRWYGFVTGLGASLSDIAYAL CEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHH LTGYGMSFVFDYINKNIFYLQLLGSIMLLLFGIYTFRSNPVQSIRPASSNKGSYFHNFIT HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHH AFFVTLSNPLIIFLFIGLFARFAFVQPGVVVFEEITGYLAIASGALVWWLGITYFVNKVR HHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKFNLRGIWILNRVIGSIVMLVSVAGLIYTLLGESLY HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIQIETIFDIIVKGFIIGVVVSAPLGPVGVLCIQRTLNKGRWYGFVTGLGASLSDIAYAL CEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHH LTGYGMSFVFDYINKNIFYLQLLGSIMLLLFGIYTFRSNPVQSIRPASSNKGSYFHNFIT HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHH AFFVTLSNPLIIFLFIGLFARFAFVQPGVVVFEEITGYLAIASGALVWWLGITYFVNKVR HHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKFNLRGIWILNRVIGSIVMLVSVAGLIYTLLGESLY HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA