| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is phnXW [H]
Identifier: 29347128
GI number: 29347128
Start: 2115309
End: 2116430
Strand: Reverse
Name: phnXW [H]
Synonym: BT_1718
Alternate gene names: 29347128
Gene position: 2116430-2115309 (Counterclockwise)
Preceding gene: 29347129
Following gene: 29347127
Centisome position: 33.81
GC content: 36.9
Gene sequence:
>1122_bases ATGAAAATAGAAAGAAAAATATTATTAAATCCTGGGCCTGCCACTACTACTGACAGTGTAAAAATGGCACAAGTTGTTCC GGATATTTGTCCTCGCGAGAAAGAATTCGCAGGTATGATGAAACAACTTCGGGACGATTTGGTCAGAGTTGCTCATGGGA ATTTGGAAAAACATACCGCTGTATTATTTTGTGGCTCAGGAACCATCAATATTGATATATGTCTAAATTCTCTTCTTCCT GAAGACAAAAGGGTGCTTATAGTGAATAATGGGGCATATAGTACCCGTGCTGTAGAAGTGTGTCAATATTATGGTTTGCC TCATATTAATTTGGAATTTTCCGTTTACGAACGTCCTGATTTATCGGTGGTGGAAAATGTGTTGCAAGAAAATCCTGATA TAGCTATGGTTTATACTACTCATCACGAGACGGGTACAGGAATTCTGAACCCTATTCGCGAGATGGGCGCTATAGCTCAT AAATATCAGGCTAAATTTGTCGTCGATACTACTTCTTCTTTGGGCATGATTCCTTTTGATATAGAGAAAGATAATGTGGA TTTTTGTATGGCATCTGCTCAAAAAGGACTTCAAGCGATGACAGGTCTTTCTTTTATTATAGGCAATGAGGAACAGATTA AGTTTTCAAAAAAATATCCCAAGCGTTCTTACTATTGTAATCTTTATTTGCAGTATGAGAATTTTGAGAGAACAGGTGAA ATGCATTTTACTCCACCGGTACAAACTATTTACGCCACTCGTCAGGCATTAAATGAATATTTTGAAGTGGGTGAAGAAGC TAAGTTTGCCCGTCACAAAAGAGTTTTTGAGGCTATTCATTCAGGTATAAATGAAATTGGTCTTAAAAGTGTAATAAAGC GTGAATGGCAGTCAGGACTGGTTGTCTCAGTTCAATACCCAGAAGATCCCAACTGGGATTTTGAGAAAATACATGATTAT TGTTATGAGCGTGGATTTACGATTTATCCAGGTAAGATATCAACTGAGGATACTTTTAGAATCTGTGCTTTAGGAGAGAT AGAAGTAGATGATATTGAGAACTTCTTTAAAGTACTAAAAGCTGCATTAAATCATTATAACGTCACATTACCGATGTCAT GA
Upstream 100 bases:
>100_bases AAAGGTTAAAATAGATTCTCGGGAGAATTTGGGACGTCCCACGACTACTCCTATAGAGAATAAGGAGCATTTTATGGATT TTTTAAAATAAATATATTCG
Downstream 100 bases:
>100_bases TTGCAGAAATATTATTGAAGATTCGTCATTTTTATTTTTCCCTTCGTGGTATACACTTCCATCCGGAAAGTGTTATTTCT GGAGTGCCTATTCGTAGCTT
Product: putative 2-aminoethylphosphonate pyruvate aminotransferase
Products: NA
Alternate protein names: Phosphonoacetaldehyde hydrolase; Phosphonatase; Phosphonoacetaldehyde phosphonohydrolase; 2-aminoethylphosphonate--pyruvate transaminase; 2-aminoethylphosphonate aminotransferase; AEP transaminase; AEPT [H]
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MKIERKILLNPGPATTTDSVKMAQVVPDICPREKEFAGMMKQLRDDLVRVAHGNLEKHTAVLFCGSGTINIDICLNSLLP EDKRVLIVNNGAYSTRAVEVCQYYGLPHINLEFSVYERPDLSVVENVLQENPDIAMVYTTHHETGTGILNPIREMGAIAH KYQAKFVVDTTSSLGMIPFDIEKDNVDFCMASAQKGLQAMTGLSFIIGNEEQIKFSKKYPKRSYYCNLYLQYENFERTGE MHFTPPVQTIYATRQALNEYFEVGEEAKFARHKRVFEAIHSGINEIGLKSVIKREWQSGLVVSVQYPEDPNWDFEKIHDY CYERGFTIYPGKISTEDTFRICALGEIEVDDIENFFKVLKAALNHYNVTLPMS
Sequences:
>Translated_373_residues MKIERKILLNPGPATTTDSVKMAQVVPDICPREKEFAGMMKQLRDDLVRVAHGNLEKHTAVLFCGSGTINIDICLNSLLP EDKRVLIVNNGAYSTRAVEVCQYYGLPHINLEFSVYERPDLSVVENVLQENPDIAMVYTTHHETGTGILNPIREMGAIAH KYQAKFVVDTTSSLGMIPFDIEKDNVDFCMASAQKGLQAMTGLSFIIGNEEQIKFSKKYPKRSYYCNLYLQYENFERTGE MHFTPPVQTIYATRQALNEYFEVGEEAKFARHKRVFEAIHSGINEIGLKSVIKREWQSGLVVSVQYPEDPNWDFEKIHDY CYERGFTIYPGKISTEDTFRICALGEIEVDDIENFFKVLKAALNHYNVTLPMS >Mature_373_residues MKIERKILLNPGPATTTDSVKMAQVVPDICPREKEFAGMMKQLRDDLVRVAHGNLEKHTAVLFCGSGTINIDICLNSLLP EDKRVLIVNNGAYSTRAVEVCQYYGLPHINLEFSVYERPDLSVVENVLQENPDIAMVYTTHHETGTGILNPIREMGAIAH KYQAKFVVDTTSSLGMIPFDIEKDNVDFCMASAQKGLQAMTGLSFIIGNEEQIKFSKKYPKRSYYCNLYLQYENFERTGE MHFTPPVQTIYATRQALNEYFEVGEEAKFARHKRVFEAIHSGINEIGLKSVIKREWQSGLVVSVQYPEDPNWDFEKIHDY CYERGFTIYPGKISTEDTFRICALGEIEVDDIENFFKVLKAALNHYNVTLPMS
Specific function: Involved in phosphonate degradation [H]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=378, Percent_Identity=24.6031746031746, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17536281, Length=320, Percent_Identity=24.6875, Blast_Score=93, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6321079, Length=300, Percent_Identity=26.3333333333333, Blast_Score=90, Evalue=6e-19, Organism=Drosophila melanogaster, GI17530823, Length=373, Percent_Identity=24.9329758713137, Blast_Score=92, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017688 - InterPro: IPR000192 - InterPro: IPR005834 - InterPro: IPR000418 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR012703 - InterPro: IPR006323 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5; PF00702 Hydrolase [H]
EC number: =3.11.1.1; =2.6.1.37 [H]
Molecular weight: Translated: 42512; Mature: 42512
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIERKILLNPGPATTTDSVKMAQVVPDICPREKEFAGMMKQLRDDLVRVAHGNLEKHTA CCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE VLFCGSGTINIDICLNSLLPEDKRVLIVNNGAYSTRAVEVCQYYGLPHINLEFSVYERPD EEEECCCEEEEEEEEHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCC LSVVENVLQENPDIAMVYTTHHETGTGILNPIREMGAIAHKYQAKFVVDTTSSLGMIPFD HHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEE IEKDNVDFCMASAQKGLQAMTGLSFIIGNEEQIKFSKKYPKRSYYCNLYLQYENFERTGE CCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHEEEHHCCCCCCEEEEEEEEEECCCCCCC MHFTPPVQTIYATRQALNEYFEVGEEAKFARHKRVFEAIHSGINEIGLKSVIKREWQSGL EEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCE VVSVQYPEDPNWDFEKIHDYCYERGFTIYPGKISTEDTFRICALGEIEVDDIENFFKVLK EEEEECCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHH AALNHYNVTLPMS HHHHHCEEEEECC >Mature Secondary Structure MKIERKILLNPGPATTTDSVKMAQVVPDICPREKEFAGMMKQLRDDLVRVAHGNLEKHTA CCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE VLFCGSGTINIDICLNSLLPEDKRVLIVNNGAYSTRAVEVCQYYGLPHINLEFSVYERPD EEEECCCEEEEEEEEHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCC LSVVENVLQENPDIAMVYTTHHETGTGILNPIREMGAIAHKYQAKFVVDTTSSLGMIPFD HHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEE IEKDNVDFCMASAQKGLQAMTGLSFIIGNEEQIKFSKKYPKRSYYCNLYLQYENFERTGE CCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHEEEHHCCCCCCEEEEEEEEEECCCCCCC MHFTPPVQTIYATRQALNEYFEVGEEAKFARHKRVFEAIHSGINEIGLKSVIKREWQSGL EEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCE VVSVQYPEDPNWDFEKIHDYCYERGFTIYPGKISTEDTFRICALGEIEVDDIENFFKVLK EEEEECCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHH AALNHYNVTLPMS HHHHHCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA