Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347078

Identifier: 29347078

GI number: 29347078

Start: 2060051

End: 2061103

Strand: Reverse

Name: 29347078

Synonym: BT_1668

Alternate gene names: NA

Gene position: 2061103-2060051 (Counterclockwise)

Preceding gene: 29347086

Following gene: 29347077

Centisome position: 32.92

GC content: 44.82

Gene sequence:

>1053_bases
ATGAAAAAGATTGTTATTTCTCTTCTGCTATTGACTTTATCGTTTCGCCTGTCAGCTCAGATCGACTATCTGGAGCCGGT
GAAGCCTTTTACTACCTATACGGGTGAGTTGGGTGAGTATTATCGAAATGTCTTTTCTTTGCTTAATACAGGTTTTCAAC
AGCGTCCTTACGCGCGTTTTGTAGCCATTCCTTCTTTTTCACCGGAATATGCAATGTCGGTAGAGAAGAAGAACGGACGT
TGTCTGTTGATTGCGAATACTTTGTCGCGTACCTATTGGCAGGCAGAGAAAGGAACGGTGAAAGTGGAAACTAAATCAGT
GGAGATCAGTCAGTCCTTATACCAGTCTTTGGGAGCTATCGCCCGTCTGGTAACCAGCCAGATACAGGATTTGGACGGTT
CGACAGCCGGACTGGATGGAGTTGTTTATTACTTCTCATCGACAGATGCGAAAGGAAAAGAGATGATGGGACGGAAGTGG
TCACCCATGAAAGGTACTTTGATGGAGCGGCTTGTGTTGGTTTGTCAGTCGACTTACATGTTTTCTCAGGGAGAAAATAT
TTCGGAACAAGCATTGGCGGAGGAAGCAACCGCTTTATTGAAAGAGCTGGAGCACCGTACCAAAGAACAGCCGGACGCTC
ACAAAAAGCCGATGTATGTGGGGATTTATTCTGTTGGTCCGAAGCTCAAAACGCATTCGGGAAAGCAAATTGAAGAATTA
CCCTGCTTGGCTGATGTTTGTGTACGGGAATATGTAGCCGGACAAATGATTTATCCTGCGGAATTGCTTAAAGACAATGT
CTCGGGATATGCTTTGTGTGAGTTTACTATAGATAAGGAGGGAGTGATTCTTCGTCCTCATATATTAAAATCGACTCATC
CGGAGTTTGCAGAAGAAGCTCTTCGCATTGTGAAGGAAATGCCAAATTGGACACCGGCACTGGTGGGAGGCAAGGCGGTT
GAAAGTGATTATACCCTTTATGTCCCTTTCCGTCCCCAGTTGTATAAAGAACAGTTGCAGATACGCGAACGCGAGTTGTC
CAAAAAACATTAA

Upstream 100 bases:

>100_bases
AGTTTCTTAGTAAAAACCGTGCAAAGATATAATTTTATCACGAACCATCGAAATAATTTGTATCTTTGTTGCCGAATGTA
CCGAAAATCGGGGAACACTT

Downstream 100 bases:

>100_bases
CGCCCGGAACTTTTCTCTTTTTATATTGTATTATCATTGTAACCAATAAAAAAAGAGAAGATATGGATGATATGATTAAC
AGACACGATTCGATTGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NB-Dependent Receptor; NB Protein

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKKIVISLLLLTLSFRLSAQIDYLEPVKPFTTYTGELGEYYRNVFSLLNTGFQQRPYARFVAIPSFSPEYAMSVEKKNGR
CLLIANTLSRTYWQAEKGTVKVETKSVEISQSLYQSLGAIARLVTSQIQDLDGSTAGLDGVVYYFSSTDAKGKEMMGRKW
SPMKGTLMERLVLVCQSTYMFSQGENISEQALAEEATALLKELEHRTKEQPDAHKKPMYVGIYSVGPKLKTHSGKQIEEL
PCLADVCVREYVAGQMIYPAELLKDNVSGYALCEFTIDKEGVILRPHILKSTHPEFAEEALRIVKEMPNWTPALVGGKAV
ESDYTLYVPFRPQLYKEQLQIRERELSKKH

Sequences:

>Translated_350_residues
MKKIVISLLLLTLSFRLSAQIDYLEPVKPFTTYTGELGEYYRNVFSLLNTGFQQRPYARFVAIPSFSPEYAMSVEKKNGR
CLLIANTLSRTYWQAEKGTVKVETKSVEISQSLYQSLGAIARLVTSQIQDLDGSTAGLDGVVYYFSSTDAKGKEMMGRKW
SPMKGTLMERLVLVCQSTYMFSQGENISEQALAEEATALLKELEHRTKEQPDAHKKPMYVGIYSVGPKLKTHSGKQIEEL
PCLADVCVREYVAGQMIYPAELLKDNVSGYALCEFTIDKEGVILRPHILKSTHPEFAEEALRIVKEMPNWTPALVGGKAV
ESDYTLYVPFRPQLYKEQLQIRERELSKKH
>Mature_350_residues
MKKIVISLLLLTLSFRLSAQIDYLEPVKPFTTYTGELGEYYRNVFSLLNTGFQQRPYARFVAIPSFSPEYAMSVEKKNGR
CLLIANTLSRTYWQAEKGTVKVETKSVEISQSLYQSLGAIARLVTSQIQDLDGSTAGLDGVVYYFSSTDAKGKEMMGRKW
SPMKGTLMERLVLVCQSTYMFSQGENISEQALAEEATALLKELEHRTKEQPDAHKKPMYVGIYSVGPKLKTHSGKQIEEL
PCLADVCVREYVAGQMIYPAELLKDNVSGYALCEFTIDKEGVILRPHILKSTHPEFAEEALRIVKEMPNWTPALVGGKAV
ESDYTLYVPFRPQLYKEQLQIRERELSKKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39624; Mature: 39624

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVISLLLLTLSFRLSAQIDYLEPVKPFTTYTGELGEYYRNVFSLLNTGFQQRPYARF
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEE
VAIPSFSPEYAMSVEKKNGRCLLIANTLSRTYWQAEKGTVKVETKSVEISQSLYQSLGAI
EECCCCCCHHHEEEECCCCCEEEEEHHHHHHHEECCCCEEEEEECHHHHHHHHHHHHHHH
ARLVTSQIQDLDGSTAGLDGVVYYFSSTDAKGKEMMGRKWSPMKGTLMERLVLVCQSTYM
HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH
FSQGENISEQALAEEATALLKELEHRTKEQPDAHKKPMYVGIYSVGPKLKTHSGKQIEEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHH
PCLADVCVREYVAGQMIYPAELLKDNVSGYALCEFTIDKEGVILRPHILKSTHPEFAEEA
HHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEEECCCCEEECCHHHCCCCHHHHHHH
LRIVKEMPNWTPALVGGKAVESDYTLYVPFRPQLYKEQLQIRERELSKKH
HHHHHHCCCCCCHHHCCEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIVISLLLLTLSFRLSAQIDYLEPVKPFTTYTGELGEYYRNVFSLLNTGFQQRPYARF
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEE
VAIPSFSPEYAMSVEKKNGRCLLIANTLSRTYWQAEKGTVKVETKSVEISQSLYQSLGAI
EECCCCCCHHHEEEECCCCCEEEEEHHHHHHHEECCCCEEEEEECHHHHHHHHHHHHHHH
ARLVTSQIQDLDGSTAGLDGVVYYFSSTDAKGKEMMGRKWSPMKGTLMERLVLVCQSTYM
HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH
FSQGENISEQALAEEATALLKELEHRTKEQPDAHKKPMYVGIYSVGPKLKTHSGKQIEEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHH
PCLADVCVREYVAGQMIYPAELLKDNVSGYALCEFTIDKEGVILRPHILKSTHPEFAEEA
HHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEEECCCCEEECCHHHCCCCHHHHHHH
LRIVKEMPNWTPALVGGKAVESDYTLYVPFRPQLYKEQLQIRERELSKKH
HHHHHHCCCCCCHHHCCEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA