| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347052
Identifier: 29347052
GI number: 29347052
Start: 2032185
End: 2033750
Strand: Reverse
Name: 29347052
Synonym: BT_1642
Alternate gene names: NA
Gene position: 2033750-2032185 (Counterclockwise)
Preceding gene: 29347053
Following gene: 29347049
Centisome position: 32.49
GC content: 40.23
Gene sequence:
>1566_bases ATGGAAGATTTGCAAAGGTTATATCCCATCGGAATACAGACATTTTCGGAAATTCGGGAGAGAAATTACCTCTATATAGA TAAGACAGAATACGTTTACCGGATGACGCATTCCTCCTCTAAATATATGTTTTTGAGTCGTCCGCGTCGTTTCGGGAAAT CACTGCTTACTTCTACGTTACATAGCTATTTTTCCGGTCGTGAAGATTTGTTCCGTGGGTTGGCGATGGAGAAACTGGAG AAAGAATGGATACAGTATCCGGTTCTACACTTCGACATGAGTATGGCAAAGCATGTGGATAAGGATAGCTTGGTGAACCT TTTAGGCTTCATGCTTGCAGAATACGAACGTACATTGGGAATTGACGCAGCAGGTACGGACCCTAATTTGCGTTTAACTA ATTTGATAAAACGTTCTTATGAGCAGACTGGCAGAAAGGTCGTGGTCCTTATTGATGAATATGACGCTCCTTTGCTGGAT GTGGTACACGAACGGGAGAACTTGGGTGTATTGCGTGACGTTATGCGTAACTTTTACAGTCCGTTGAAAGCTTGTGATCC TTATTTGCGCTATATATTTCTTACAGGTATCACTAAATTCTCACAACTCAGTATTTTTAGTGAACTCAATAACATCAAAA ATATCAGCATGGATGAGCCTTATGCTGCTATTTGTGGTATAACGGGGAATGAGATACTTACTCAGATGAAAAAGGATGTG GATAGGCTGGCTGTCAAATTGAATATTACTGCGGAGGAAGTATTGTTTAAGTTGAAAGAGAATTATGACGGCTATCATTT CACTTATCCGTCACCTGATATTTACAATCCGTTCAGTTTACTCAATGCTTTTGCGGATGGAAAATTTAATTCTTATTGGT TTGGTAGCGGCACTCCTACCTATTTGATAAAGATGCTGGATAAATTTGATGTAGCACCTTCTGAAATTGGGGCGAAAACG GCTACAGCAGAAGATTTTGATGCACCGACAGAAACGATGACAAATATCACTCCATTACTGTATCAGAGCGGATATATCAC TATTAAAGGGTATGATGAGGAACTGAATCTTTATACGCTTGATATTCCCAATAAGGAAGTAAGAATAGGATTAATGAAAA GCTTGTTGCCTCATTATGTATCTTCGCCTACAGAAAAAACGAATACCATGGTGGCTTATCTTTCCCGTGATATTCGGAAT GGTGATATGGATGCGGCATTACGTCGCTTACAGGAATTCTTATCCACCATTCCCCAGTGTGATAATACGAAATACGAAGG TCATTATCAGCAGATATTCTATATCATATTCAGCCTGTTGGGTTTCTATGTAGATGTTGAAGTACGTACTCCGCGTGGAC GGGTGGATATGGTGCTTCGTACTAAAACTACGTTGTATACCTTTGAACTGAAACTGGATAAGAATGCGACTGTCGCCATG GAGCAGATTAACCTGAAGAATTATCCCGAACGTTTTGCTCTGTGCGGATTGCCGATAGTGAAGGTAGCGGTCAACTTTGA TAGTGAGAGTTGTACATTGGGAGATTGGAAGATTGAAAAAGTATAA
Upstream 100 bases:
>100_bases GTTATGAAAGAAGAGATTGCATTATTATGATAGATGAAGAATTGTTAAGTAATAGGTCAATCTGATATTTTTTCGTAGTT TTGTGAAAAAGATAATTGAT
Downstream 100 bases:
>100_bases AAATGTAGAATGCAAAAAAACGCAGATGGTAAAATAATAAAAGATTTGTCCCGGCAGTTTGTGGTCGGGACAAATCATTG AAGAGCTTGATAGTTGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 521; Mature: 521
Protein sequence:
>521_residues MEDLQRLYPIGIQTFSEIRERNYLYIDKTEYVYRMTHSSSKYMFLSRPRRFGKSLLTSTLHSYFSGREDLFRGLAMEKLE KEWIQYPVLHFDMSMAKHVDKDSLVNLLGFMLAEYERTLGIDAAGTDPNLRLTNLIKRSYEQTGRKVVVLIDEYDAPLLD VVHERENLGVLRDVMRNFYSPLKACDPYLRYIFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITGNEILTQMKKDV DRLAVKLNITAEEVLFKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPTYLIKMLDKFDVAPSEIGAKT ATAEDFDAPTETMTNITPLLYQSGYITIKGYDEELNLYTLDIPNKEVRIGLMKSLLPHYVSSPTEKTNTMVAYLSRDIRN GDMDAALRRLQEFLSTIPQCDNTKYEGHYQQIFYIIFSLLGFYVDVEVRTPRGRVDMVLRTKTTLYTFELKLDKNATVAM EQINLKNYPERFALCGLPIVKVAVNFDSESCTLGDWKIEKV
Sequences:
>Translated_521_residues MEDLQRLYPIGIQTFSEIRERNYLYIDKTEYVYRMTHSSSKYMFLSRPRRFGKSLLTSTLHSYFSGREDLFRGLAMEKLE KEWIQYPVLHFDMSMAKHVDKDSLVNLLGFMLAEYERTLGIDAAGTDPNLRLTNLIKRSYEQTGRKVVVLIDEYDAPLLD VVHERENLGVLRDVMRNFYSPLKACDPYLRYIFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITGNEILTQMKKDV DRLAVKLNITAEEVLFKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPTYLIKMLDKFDVAPSEIGAKT ATAEDFDAPTETMTNITPLLYQSGYITIKGYDEELNLYTLDIPNKEVRIGLMKSLLPHYVSSPTEKTNTMVAYLSRDIRN GDMDAALRRLQEFLSTIPQCDNTKYEGHYQQIFYIIFSLLGFYVDVEVRTPRGRVDMVLRTKTTLYTFELKLDKNATVAM EQINLKNYPERFALCGLPIVKVAVNFDSESCTLGDWKIEKV >Mature_521_residues MEDLQRLYPIGIQTFSEIRERNYLYIDKTEYVYRMTHSSSKYMFLSRPRRFGKSLLTSTLHSYFSGREDLFRGLAMEKLE KEWIQYPVLHFDMSMAKHVDKDSLVNLLGFMLAEYERTLGIDAAGTDPNLRLTNLIKRSYEQTGRKVVVLIDEYDAPLLD VVHERENLGVLRDVMRNFYSPLKACDPYLRYIFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITGNEILTQMKKDV DRLAVKLNITAEEVLFKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPTYLIKMLDKFDVAPSEIGAKT ATAEDFDAPTETMTNITPLLYQSGYITIKGYDEELNLYTLDIPNKEVRIGLMKSLLPHYVSSPTEKTNTMVAYLSRDIRN GDMDAALRRLQEFLSTIPQCDNTKYEGHYQQIFYIIFSLLGFYVDVEVRTPRGRVDMVLRTKTTLYTFELKLDKNATVAM EQINLKNYPERFALCGLPIVKVAVNFDSESCTLGDWKIEKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018631 - InterPro: IPR012547 [H]
Pfam domain/function: PF09820 AAA-ATPase_like; PF08011 DUF1703 [H]
EC number: NA
Molecular weight: Translated: 60194; Mature: 60194
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDLQRLYPIGIQTFSEIRERNYLYIDKTEYVYRMTHSSSKYMFLSRPRRFGKSLLTSTL CCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCEEEECCHHHHHHHHHHHHH HSYFSGREDLFRGLAMEKLEKEWIQYPVLHFDMSMAKHVDKDSLVNLLGFMLAEYERTLG HHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC IDAAGTDPNLRLTNLIKRSYEQTGRKVVVLIDEYDAPLLDVVHERENLGVLRDVMRNFYS CCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHH PLKACDPYLRYIFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITGNEILTQMKKDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHH DRLAVKLNITAEEVLFKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPT HHEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEECCCCHH YLIKMLDKFDVAPSEIGAKTATAEDFDAPTETMTNITPLLYQSGYITIKGYDEELNLYTL HHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHCCHHHEECCEEEEEEECCCCEEEEE DIPNKEVRIGLMKSLLPHYVSSPTEKTNTMVAYLSRDIRNGDMDAALRRLQEFLSTIPQC ECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC DNTKYEGHYQQIFYIIFSLLGFYVDVEVRTPRGRVDMVLRTKTTLYTFELKLDKNATVAM CCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEEEEEEEEEEEEECCCCEEEE EQINLKNYPERFALCGLPIVKVAVNFDSESCTLGDWKIEKV ECCCCCCCCHHHHHCCCCEEEEEEECCCCCEEECCEEECCC >Mature Secondary Structure MEDLQRLYPIGIQTFSEIRERNYLYIDKTEYVYRMTHSSSKYMFLSRPRRFGKSLLTSTL CCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCEEEECCHHHHHHHHHHHHH HSYFSGREDLFRGLAMEKLEKEWIQYPVLHFDMSMAKHVDKDSLVNLLGFMLAEYERTLG HHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC IDAAGTDPNLRLTNLIKRSYEQTGRKVVVLIDEYDAPLLDVVHERENLGVLRDVMRNFYS CCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHH PLKACDPYLRYIFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITGNEILTQMKKDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHH DRLAVKLNITAEEVLFKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPT HHEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEECCCCHH YLIKMLDKFDVAPSEIGAKTATAEDFDAPTETMTNITPLLYQSGYITIKGYDEELNLYTL HHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHCCHHHEECCEEEEEEECCCCEEEEE DIPNKEVRIGLMKSLLPHYVSSPTEKTNTMVAYLSRDIRNGDMDAALRRLQEFLSTIPQC ECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC DNTKYEGHYQQIFYIIFSLLGFYVDVEVRTPRGRVDMVLRTKTTLYTFELKLDKNATVAM CCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEEEEEEEEEEEEECCCCEEEE EQINLKNYPERFALCGLPIVKVAVNFDSESCTLGDWKIEKV ECCCCCCCCHHHHHCCCCEEEEEEECCCCCEEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2388847 [H]