Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347052

Identifier: 29347052

GI number: 29347052

Start: 2032185

End: 2033750

Strand: Reverse

Name: 29347052

Synonym: BT_1642

Alternate gene names: NA

Gene position: 2033750-2032185 (Counterclockwise)

Preceding gene: 29347053

Following gene: 29347049

Centisome position: 32.49

GC content: 40.23

Gene sequence:

>1566_bases
ATGGAAGATTTGCAAAGGTTATATCCCATCGGAATACAGACATTTTCGGAAATTCGGGAGAGAAATTACCTCTATATAGA
TAAGACAGAATACGTTTACCGGATGACGCATTCCTCCTCTAAATATATGTTTTTGAGTCGTCCGCGTCGTTTCGGGAAAT
CACTGCTTACTTCTACGTTACATAGCTATTTTTCCGGTCGTGAAGATTTGTTCCGTGGGTTGGCGATGGAGAAACTGGAG
AAAGAATGGATACAGTATCCGGTTCTACACTTCGACATGAGTATGGCAAAGCATGTGGATAAGGATAGCTTGGTGAACCT
TTTAGGCTTCATGCTTGCAGAATACGAACGTACATTGGGAATTGACGCAGCAGGTACGGACCCTAATTTGCGTTTAACTA
ATTTGATAAAACGTTCTTATGAGCAGACTGGCAGAAAGGTCGTGGTCCTTATTGATGAATATGACGCTCCTTTGCTGGAT
GTGGTACACGAACGGGAGAACTTGGGTGTATTGCGTGACGTTATGCGTAACTTTTACAGTCCGTTGAAAGCTTGTGATCC
TTATTTGCGCTATATATTTCTTACAGGTATCACTAAATTCTCACAACTCAGTATTTTTAGTGAACTCAATAACATCAAAA
ATATCAGCATGGATGAGCCTTATGCTGCTATTTGTGGTATAACGGGGAATGAGATACTTACTCAGATGAAAAAGGATGTG
GATAGGCTGGCTGTCAAATTGAATATTACTGCGGAGGAAGTATTGTTTAAGTTGAAAGAGAATTATGACGGCTATCATTT
CACTTATCCGTCACCTGATATTTACAATCCGTTCAGTTTACTCAATGCTTTTGCGGATGGAAAATTTAATTCTTATTGGT
TTGGTAGCGGCACTCCTACCTATTTGATAAAGATGCTGGATAAATTTGATGTAGCACCTTCTGAAATTGGGGCGAAAACG
GCTACAGCAGAAGATTTTGATGCACCGACAGAAACGATGACAAATATCACTCCATTACTGTATCAGAGCGGATATATCAC
TATTAAAGGGTATGATGAGGAACTGAATCTTTATACGCTTGATATTCCCAATAAGGAAGTAAGAATAGGATTAATGAAAA
GCTTGTTGCCTCATTATGTATCTTCGCCTACAGAAAAAACGAATACCATGGTGGCTTATCTTTCCCGTGATATTCGGAAT
GGTGATATGGATGCGGCATTACGTCGCTTACAGGAATTCTTATCCACCATTCCCCAGTGTGATAATACGAAATACGAAGG
TCATTATCAGCAGATATTCTATATCATATTCAGCCTGTTGGGTTTCTATGTAGATGTTGAAGTACGTACTCCGCGTGGAC
GGGTGGATATGGTGCTTCGTACTAAAACTACGTTGTATACCTTTGAACTGAAACTGGATAAGAATGCGACTGTCGCCATG
GAGCAGATTAACCTGAAGAATTATCCCGAACGTTTTGCTCTGTGCGGATTGCCGATAGTGAAGGTAGCGGTCAACTTTGA
TAGTGAGAGTTGTACATTGGGAGATTGGAAGATTGAAAAAGTATAA

Upstream 100 bases:

>100_bases
GTTATGAAAGAAGAGATTGCATTATTATGATAGATGAAGAATTGTTAAGTAATAGGTCAATCTGATATTTTTTCGTAGTT
TTGTGAAAAAGATAATTGAT

Downstream 100 bases:

>100_bases
AAATGTAGAATGCAAAAAAACGCAGATGGTAAAATAATAAAAGATTTGTCCCGGCAGTTTGTGGTCGGGACAAATCATTG
AAGAGCTTGATAGTTGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MEDLQRLYPIGIQTFSEIRERNYLYIDKTEYVYRMTHSSSKYMFLSRPRRFGKSLLTSTLHSYFSGREDLFRGLAMEKLE
KEWIQYPVLHFDMSMAKHVDKDSLVNLLGFMLAEYERTLGIDAAGTDPNLRLTNLIKRSYEQTGRKVVVLIDEYDAPLLD
VVHERENLGVLRDVMRNFYSPLKACDPYLRYIFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITGNEILTQMKKDV
DRLAVKLNITAEEVLFKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPTYLIKMLDKFDVAPSEIGAKT
ATAEDFDAPTETMTNITPLLYQSGYITIKGYDEELNLYTLDIPNKEVRIGLMKSLLPHYVSSPTEKTNTMVAYLSRDIRN
GDMDAALRRLQEFLSTIPQCDNTKYEGHYQQIFYIIFSLLGFYVDVEVRTPRGRVDMVLRTKTTLYTFELKLDKNATVAM
EQINLKNYPERFALCGLPIVKVAVNFDSESCTLGDWKIEKV

Sequences:

>Translated_521_residues
MEDLQRLYPIGIQTFSEIRERNYLYIDKTEYVYRMTHSSSKYMFLSRPRRFGKSLLTSTLHSYFSGREDLFRGLAMEKLE
KEWIQYPVLHFDMSMAKHVDKDSLVNLLGFMLAEYERTLGIDAAGTDPNLRLTNLIKRSYEQTGRKVVVLIDEYDAPLLD
VVHERENLGVLRDVMRNFYSPLKACDPYLRYIFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITGNEILTQMKKDV
DRLAVKLNITAEEVLFKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPTYLIKMLDKFDVAPSEIGAKT
ATAEDFDAPTETMTNITPLLYQSGYITIKGYDEELNLYTLDIPNKEVRIGLMKSLLPHYVSSPTEKTNTMVAYLSRDIRN
GDMDAALRRLQEFLSTIPQCDNTKYEGHYQQIFYIIFSLLGFYVDVEVRTPRGRVDMVLRTKTTLYTFELKLDKNATVAM
EQINLKNYPERFALCGLPIVKVAVNFDSESCTLGDWKIEKV
>Mature_521_residues
MEDLQRLYPIGIQTFSEIRERNYLYIDKTEYVYRMTHSSSKYMFLSRPRRFGKSLLTSTLHSYFSGREDLFRGLAMEKLE
KEWIQYPVLHFDMSMAKHVDKDSLVNLLGFMLAEYERTLGIDAAGTDPNLRLTNLIKRSYEQTGRKVVVLIDEYDAPLLD
VVHERENLGVLRDVMRNFYSPLKACDPYLRYIFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITGNEILTQMKKDV
DRLAVKLNITAEEVLFKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPTYLIKMLDKFDVAPSEIGAKT
ATAEDFDAPTETMTNITPLLYQSGYITIKGYDEELNLYTLDIPNKEVRIGLMKSLLPHYVSSPTEKTNTMVAYLSRDIRN
GDMDAALRRLQEFLSTIPQCDNTKYEGHYQQIFYIIFSLLGFYVDVEVRTPRGRVDMVLRTKTTLYTFELKLDKNATVAM
EQINLKNYPERFALCGLPIVKVAVNFDSESCTLGDWKIEKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018631
- InterPro:   IPR012547 [H]

Pfam domain/function: PF09820 AAA-ATPase_like; PF08011 DUF1703 [H]

EC number: NA

Molecular weight: Translated: 60194; Mature: 60194

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDLQRLYPIGIQTFSEIRERNYLYIDKTEYVYRMTHSSSKYMFLSRPRRFGKSLLTSTL
CCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCEEEECCHHHHHHHHHHHHH
HSYFSGREDLFRGLAMEKLEKEWIQYPVLHFDMSMAKHVDKDSLVNLLGFMLAEYERTLG
HHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
IDAAGTDPNLRLTNLIKRSYEQTGRKVVVLIDEYDAPLLDVVHERENLGVLRDVMRNFYS
CCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHH
PLKACDPYLRYIFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITGNEILTQMKKDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHH
DRLAVKLNITAEEVLFKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPT
HHEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEECCCCHH
YLIKMLDKFDVAPSEIGAKTATAEDFDAPTETMTNITPLLYQSGYITIKGYDEELNLYTL
HHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHCCHHHEECCEEEEEEECCCCEEEEE
DIPNKEVRIGLMKSLLPHYVSSPTEKTNTMVAYLSRDIRNGDMDAALRRLQEFLSTIPQC
ECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
DNTKYEGHYQQIFYIIFSLLGFYVDVEVRTPRGRVDMVLRTKTTLYTFELKLDKNATVAM
CCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEEEEEEEEEEEEECCCCEEEE
EQINLKNYPERFALCGLPIVKVAVNFDSESCTLGDWKIEKV
ECCCCCCCCHHHHHCCCCEEEEEEECCCCCEEECCEEECCC
>Mature Secondary Structure
MEDLQRLYPIGIQTFSEIRERNYLYIDKTEYVYRMTHSSSKYMFLSRPRRFGKSLLTSTL
CCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCEEEECCHHHHHHHHHHHHH
HSYFSGREDLFRGLAMEKLEKEWIQYPVLHFDMSMAKHVDKDSLVNLLGFMLAEYERTLG
HHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
IDAAGTDPNLRLTNLIKRSYEQTGRKVVVLIDEYDAPLLDVVHERENLGVLRDVMRNFYS
CCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHH
PLKACDPYLRYIFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITGNEILTQMKKDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHH
DRLAVKLNITAEEVLFKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPT
HHEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEECCCCHH
YLIKMLDKFDVAPSEIGAKTATAEDFDAPTETMTNITPLLYQSGYITIKGYDEELNLYTL
HHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHCCHHHEECCEEEEEEECCCCEEEEE
DIPNKEVRIGLMKSLLPHYVSSPTEKTNTMVAYLSRDIRNGDMDAALRRLQEFLSTIPQC
ECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
DNTKYEGHYQQIFYIIFSLLGFYVDVEVRTPRGRVDMVLRTKTTLYTFELKLDKNATVAM
CCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEEEEEEEEEEEEECCCCEEEE
EQINLKNYPERFALCGLPIVKVAVNFDSESCTLGDWKIEKV
ECCCCCCCCHHHHHCCCCEEEEEEECCCCCEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2388847 [H]