| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is queF [H]
Identifier: 29346974
GI number: 29346974
Start: 1929521
End: 1929976
Strand: Reverse
Name: queF [H]
Synonym: BT_1564
Alternate gene names: 29346974
Gene position: 1929976-1929521 (Counterclockwise)
Preceding gene: 29346976
Following gene: 29346973
Centisome position: 30.83
GC content: 41.89
Gene sequence:
>456_bases ATGGCTGAATTAAAAGACCAACTTTCCTTATTAGGAAGAAAAACGGAGTATAAACAAGACTATGCTCCTGAAGTATTGGA GGCTTTCGATAATAAGCATCCGGAAAATGACTACTGGGTACGTTTCAACTGTCCCGAATTTACAAGCCTGTGCCCCATAA CCGGACAACCTGACTTTGCAGAAATACGTATCAGCTACATCCCCGACATTAAGATGGTGGAAAGCAAGAGTTTGAAACTT TATCTGTTCAGCTTCCGTAATCATGGTGCATTTCATGAAGACTGTGTGAACATCATCATGAAAGATTTGATAAAACTGAT GAATCCCAAATATATCGAGGTTACGGGTATCTTTACTCCACGTGGCGGTATTTCGATTTATCCGTATGCCAATTATGGCC GTCCGGGAACGAAGTTCGAACAGATGGCAGAGCACCGGTTGATGAATCGGGAATAA
Upstream 100 bases:
>100_bases TGAACCATCGATGGATAAGCCGTTTCAGAGAATATGGTGACAGGTGAAAGATGTTTTGCGTTTTTTTCTATATGAAGAGA GTTTAAAACTATATTAAACA
Downstream 100 bases:
>100_bases CCAGATATAAAAATAATAATACGAGCAGAATATGACTCATAATATACCTACTGAATTGCAGAGATACGTGCAGGAAAGGA TTATCCCGCAATATGCCGGC
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase [H]
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MAELKDQLSLLGRKTEYKQDYAPEVLEAFDNKHPENDYWVRFNCPEFTSLCPITGQPDFAEIRISYIPDIKMVESKSLKL YLFSFRNHGAFHEDCVNIIMKDLIKLMNPKYIEVTGIFTPRGGISIYPYANYGRPGTKFEQMAEHRLMNRE
Sequences:
>Translated_151_residues MAELKDQLSLLGRKTEYKQDYAPEVLEAFDNKHPENDYWVRFNCPEFTSLCPITGQPDFAEIRISYIPDIKMVESKSLKL YLFSFRNHGAFHEDCVNIIMKDLIKLMNPKYIEVTGIFTPRGGISIYPYANYGRPGTKFEQMAEHRLMNRE >Mature_150_residues AELKDQLSLLGRKTEYKQDYAPEVLEAFDNKHPENDYWVRFNCPEFTSLCPITGQPDFAEIRISYIPDIKMVESKSLKLY LFSFRNHGAFHEDCVNIIMKDLIKLMNPKYIEVTGIFTPRGGISIYPYANYGRPGTKFEQMAEHRLMNRE
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) [H]
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789158, Length=81, Percent_Identity=39.5061728395062, Blast_Score=68, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016856 - InterPro: IPR020602 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =1.7.1.13 [H]
Molecular weight: Translated: 17680; Mature: 17548
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELKDQLSLLGRKTEYKQDYAPEVLEAFDNKHPENDYWVRFNCPEFTSLCPITGQPDFA CCCHHHHHHHHCCCCHHCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHH EIRISYIPDIKMVESKSLKLYLFSFRNHGAFHEDCVNIIMKDLIKLMNPKYIEVTGIFTP EEEEEECCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECC RGGISIYPYANYGRPGTKFEQMAEHRLMNRE CCCEEEEECCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure AELKDQLSLLGRKTEYKQDYAPEVLEAFDNKHPENDYWVRFNCPEFTSLCPITGQPDFA CCHHHHHHHHCCCCHHCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHH EIRISYIPDIKMVESKSLKLYLFSFRNHGAFHEDCVNIIMKDLIKLMNPKYIEVTGIFTP EEEEEECCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECC RGGISIYPYANYGRPGTKFEQMAEHRLMNRE CCCEEEEECCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA