| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346968
Identifier: 29346968
GI number: 29346968
Start: 1925199
End: 1926251
Strand: Reverse
Name: 29346968
Synonym: BT_1558
Alternate gene names: NA
Gene position: 1926251-1925199 (Counterclockwise)
Preceding gene: 29346969
Following gene: 29346967
Centisome position: 30.77
GC content: 49.76
Gene sequence:
>1053_bases ATGAAGAAAGAAAATGATGAAATAACCGATCTGTTTCGCACTCGTCTCGCTGATGCCGGGATGACTGTTCGGGATGGCTT TTGGGAAGAGCTTTCGCAGGATATCCCTGTGGCTTGTCAGCATCGCCGTCGGTTGATATTCTTCCGTGTGGCAGCGGCAG CATCTGTGTTGCTGGTATTGGCTGCATCCTCAGCTACTTTCTGGTATCTCTCTCCGAAAGAAGAGATGGAGGAGGCGTTT ACCAAAATCGTGGTGGCGAACAGCGGAAGAATGGATGGAGATGGTGTACGCGCTAATCAGTTGCCGACGGCAATGGAACC TGTATTGCCGAAACCGGCACCTAAATCATTCGGATTATTATCGCAGTATCCGGAAGAGGGAGACTCGGTTTCCATTTCCT TCTCCATGTCTTTCTCTTTCTCGGCAACTACCACCACGGGAAATGGCAACCGATACGGCAACCAAGGTCGCAACGGTTAT TGGCAGGCGAATAATGGTAACACAGAACCATCCGCCGCACAAGAAGAAAAATATACTACCGGTACACCTGCTCCGGTGGA AAACGTAAAAAAACATCGCTGGGCTTTGAAAGCGCAGATGGGGACGGCACTTCCGGCAGAGGACGGTGCCTACAAGATGC CGATCTCCGCAGGAGTCACTGTAGAGCGGAAACTGAATGACTATCTCGGAATAGAGACCGGACTGCTTTATTCGAATCTG CGCTCGGAAGGACAGCACCTGCATTATCTGGGCATCCCGCTGAAAGCGAATATTACCTTGATGGATACAAAGAAAATCGA CCTCTACGCTACGGTAGGCGGAGTGGCGGACAAATGTATAGCCGGTGCGCCGGACAACAGTTTTAAAGAAGAACCTATCC AACTGGCAGTTACTGCCGGTATCGGAATCACTTACAAAATTAATGACCGATTGGCGGTTTTTGCCGAGCCGGGTGTTTCC CATCATTTCAAGACGGATTCGAAACTGGCTACGGTACGCACGAAACGGCCGACTAATTTTAATTTACTTTGCGGACTTCG CATGACGTATTAA
Upstream 100 bases:
>100_bases GAGATAGCCGGGATGCTTCACATTAAAGAACATTCGTCTACTTCGCAGTTACACAGAGCCAAGTATTTGTTAGCAAAAAG AATAAAAGAATATAGAAATC
Downstream 100 bases:
>100_bases TCCTTATAAAAATGAAAAAAACACTTATGATGCTGTGGATGGCTGTTAGCCTGATGGTATCCCTGGTGGGATGCAGCAGC GAAGAAATGGACTATGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MKKENDEITDLFRTRLADAGMTVRDGFWEELSQDIPVACQHRRRLIFFRVAAAASVLLVLAASSATFWYLSPKEEMEEAF TKIVVANSGRMDGDGVRANQLPTAMEPVLPKPAPKSFGLLSQYPEEGDSVSISFSMSFSFSATTTTGNGNRYGNQGRNGY WQANNGNTEPSAAQEEKYTTGTPAPVENVKKHRWALKAQMGTALPAEDGAYKMPISAGVTVERKLNDYLGIETGLLYSNL RSEGQHLHYLGIPLKANITLMDTKKIDLYATVGGVADKCIAGAPDNSFKEEPIQLAVTAGIGITYKINDRLAVFAEPGVS HHFKTDSKLATVRTKRPTNFNLLCGLRMTY
Sequences:
>Translated_350_residues MKKENDEITDLFRTRLADAGMTVRDGFWEELSQDIPVACQHRRRLIFFRVAAAASVLLVLAASSATFWYLSPKEEMEEAF TKIVVANSGRMDGDGVRANQLPTAMEPVLPKPAPKSFGLLSQYPEEGDSVSISFSMSFSFSATTTTGNGNRYGNQGRNGY WQANNGNTEPSAAQEEKYTTGTPAPVENVKKHRWALKAQMGTALPAEDGAYKMPISAGVTVERKLNDYLGIETGLLYSNL RSEGQHLHYLGIPLKANITLMDTKKIDLYATVGGVADKCIAGAPDNSFKEEPIQLAVTAGIGITYKINDRLAVFAEPGVS HHFKTDSKLATVRTKRPTNFNLLCGLRMTY >Mature_350_residues MKKENDEITDLFRTRLADAGMTVRDGFWEELSQDIPVACQHRRRLIFFRVAAAASVLLVLAASSATFWYLSPKEEMEEAF TKIVVANSGRMDGDGVRANQLPTAMEPVLPKPAPKSFGLLSQYPEEGDSVSISFSMSFSFSATTTTGNGNRYGNQGRNGY WQANNGNTEPSAAQEEKYTTGTPAPVENVKKHRWALKAQMGTALPAEDGAYKMPISAGVTVERKLNDYLGIETGLLYSNL RSEGQHLHYLGIPLKANITLMDTKKIDLYATVGGVADKCIAGAPDNSFKEEPIQLAVTAGIGITYKINDRLAVFAEPGVS HHFKTDSKLATVRTKRPTNFNLLCGLRMTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38371; Mature: 38371
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKENDEITDLFRTRLADAGMTVRDGFWEELSQDIPVACQHRRRLIFFRVAAAASVLLVL CCCCCHHHHHHHHHHHHHCCCCHHCCHHHHHCCCCCHHHHCCCEEEEEEHHHHHHHHHHE AASSATFWYLSPKEEMEEAFTKIVVANSGRMDGDGVRANQLPTAMEPVLPKPAPKSFGLL EECCCEEEEECCHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHH SQYPEEGDSVSISFSMSFSFSATTTTGNGNRYGNQGRNGYWQANNGNTEPSAAQEEKYTT HHCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC GTPAPVENVKKHRWALKAQMGTALPAEDGAYKMPISAGVTVERKLNDYLGIETGLLYSNL CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEHHHHHHCCHHHHHHHHH RSEGQHLHYLGIPLKANITLMDTKKIDLYATVGGVADKCIAGAPDNSFKEEPIQLAVTAG HCCCCEEEEEECEEEECEEEEECCEEEEEEEECCHHHHHHCCCCCCCCCCCCEEEEEEEC IGITYKINDRLAVFAEPGVSHHFKTDSKLATVRTKRPTNFNLLCGLRMTY CEEEEEECCEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECC >Mature Secondary Structure MKKENDEITDLFRTRLADAGMTVRDGFWEELSQDIPVACQHRRRLIFFRVAAAASVLLVL CCCCCHHHHHHHHHHHHHCCCCHHCCHHHHHCCCCCHHHHCCCEEEEEEHHHHHHHHHHE AASSATFWYLSPKEEMEEAFTKIVVANSGRMDGDGVRANQLPTAMEPVLPKPAPKSFGLL EECCCEEEEECCHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHH SQYPEEGDSVSISFSMSFSFSATTTTGNGNRYGNQGRNGYWQANNGNTEPSAAQEEKYTT HHCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC GTPAPVENVKKHRWALKAQMGTALPAEDGAYKMPISAGVTVERKLNDYLGIETGLLYSNL CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEHHHHHHCCHHHHHHHHH RSEGQHLHYLGIPLKANITLMDTKKIDLYATVGGVADKCIAGAPDNSFKEEPIQLAVTAG HCCCCEEEEEECEEEECEEEEECCEEEEEEEECCHHHHHHCCCCCCCCCCCCEEEEEEEC IGITYKINDRLAVFAEPGVSHHFKTDSKLATVRTKRPTNFNLLCGLRMTY CEEEEEECCEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA