| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346965
Identifier: 29346965
GI number: 29346965
Start: 1922759
End: 1923694
Strand: Reverse
Name: 29346965
Synonym: BT_1555
Alternate gene names: NA
Gene position: 1923694-1922759 (Counterclockwise)
Preceding gene: 29346966
Following gene: 29346960
Centisome position: 30.73
GC content: 50.53
Gene sequence:
>936_bases ATGAACAGAATTACTTCTCTTTTCGGTATTCAGTATCCTATTATTCAAGGTGGCATGGTGTGGTGTAGCGGTTGGCGTCT CGCTTCCGCAGTAAGTAATGCGGGAGGATTGGGACTGCTTGGCGCAGGCTCTATGCATCCGGAGACTCTTCGTGAACATA TCCGGAAATGCCGTGCGGCTACAGACCGTCCCTTTGGAGTCAATATTCCCTTGATGTATCCTCAGATTGAAGAAATCATG GCGATTGTTGCCGAAGAGGGCGTCAAGATCGTTTTCACTTCTGCCGGAAATCCTAAAGCATGGACCGGATGGCTGCACGA ACGTGGTATTATCGTAGCTCATGTCGTTTCCTCTTCCCGTTTCGCGATGAAATGTGAAGAGGCGGGAGTAGATGCGGTAG TCGCTGAAGGTTTCGAAGCCGGCGGACATAACGGGCGTGAAGAAACTACCACTTTCTGCTTGATTCCTGCGGTACGTAGT GCGACCACTTTGCCTTTGATCGCTGCAGGAGGTATCGGTACGGGAGAAGGTATCTTTGCTGCCATGGTGCTGGGAGCAGA AGGGGTACAAATCGGTACTCGCTTTGCGTTGACGGATGAAAGTTCAGCCAGCCCGGTCTTCAAAGAATATTGTCTGGGTT TGGGAGAAGGAGATACTAAATTATTATTGAAGAAACTGGCTCCGACACGTTTAGTGCGGAATAATTTCCGGGATGCTGTG GAGAGGGCTGAGGATGGCGGTGCTTCTGCCGAAGAATTGCGGACTCTTCTTGGGAGAGGTCGTGCGAAGAAAGGTATCTT TGAAGGGGATCTGGAAGAAGGCGAACTGGAGATAGGGCAGGTGTCGGCTATTGTTTCCCGTCAGCAGTCAGTAGCGGAAG TCATGAATGAATTGGTGGAGGCTATGCAGCGGGCAGCGGAGAAGAAATATTGGTAA
Upstream 100 bases:
>100_bases CGCCCCATTGAACAGATTGCCCGCTGAAACTGTTTTATTAAATATGGACATGTCTCATGTTCCATGTTATCAGATTAGCA CATTGAAAAACGATTAATTT
Downstream 100 bases:
>100_bases AAAAACAAGTTCCGAAGTAGTGGGTTTGGAAAACCTGACTACTTCAGAACTTTACTACTTCAGAAAGTTGGCTGCTTAAT CAATTTATAGGTTTATATTT
Product: dioxygenase, related to 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MNRITSLFGIQYPIIQGGMVWCSGWRLASAVSNAGGLGLLGAGSMHPETLREHIRKCRAATDRPFGVNIPLMYPQIEEIM AIVAEEGVKIVFTSAGNPKAWTGWLHERGIIVAHVVSSSRFAMKCEEAGVDAVVAEGFEAGGHNGREETTTFCLIPAVRS ATTLPLIAAGGIGTGEGIFAAMVLGAEGVQIGTRFALTDESSASPVFKEYCLGLGEGDTKLLLKKLAPTRLVRNNFRDAV ERAEDGGASAEELRTLLGRGRAKKGIFEGDLEEGELEIGQVSAIVSRQQSVAEVMNELVEAMQRAAEKKYW
Sequences:
>Translated_311_residues MNRITSLFGIQYPIIQGGMVWCSGWRLASAVSNAGGLGLLGAGSMHPETLREHIRKCRAATDRPFGVNIPLMYPQIEEIM AIVAEEGVKIVFTSAGNPKAWTGWLHERGIIVAHVVSSSRFAMKCEEAGVDAVVAEGFEAGGHNGREETTTFCLIPAVRS ATTLPLIAAGGIGTGEGIFAAMVLGAEGVQIGTRFALTDESSASPVFKEYCLGLGEGDTKLLLKKLAPTRLVRNNFRDAV ERAEDGGASAEELRTLLGRGRAKKGIFEGDLEEGELEIGQVSAIVSRQQSVAEVMNELVEAMQRAAEKKYW >Mature_311_residues MNRITSLFGIQYPIIQGGMVWCSGWRLASAVSNAGGLGLLGAGSMHPETLREHIRKCRAATDRPFGVNIPLMYPQIEEIM AIVAEEGVKIVFTSAGNPKAWTGWLHERGIIVAHVVSSSRFAMKCEEAGVDAVVAEGFEAGGHNGREETTTFCLIPAVRS ATTLPLIAAGGIGTGEGIFAAMVLGAEGVQIGTRFALTDESSASPVFKEYCLGLGEGDTKLLLKKLAPTRLVRNNFRDAV ERAEDGGASAEELRTLLGRGRAKKGIFEGDLEEGELEIGQVSAIVSRQQSVAEVMNELVEAMQRAAEKKYW
Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 33293; Mature: 33293
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRITSLFGIQYPIIQGGMVWCSGWRLASAVSNAGGLGLLGAGSMHPETLREHIRKCRAA CCCHHHHHCCCCHHHCCCEEEECCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHC TDRPFGVNIPLMYPQIEEIMAIVAEEGVKIVFTSAGNPKAWTGWLHERGIIVAHVVSSSR CCCCCCCCCCEECCCHHHHHHHHHHCCCEEEEECCCCCCCEEHHHHHCCEEEEEEECCCC FAMKCEEAGVDAVVAEGFEAGGHNGREETTTFCLIPAVRSATTLPLIAAGGIGTGEGIFA CEEEHHHCCCCHHHHHCHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHH AMVLGAEGVQIGTRFALTDESSASPVFKEYCLGLGEGDTKLLLKKLAPTRLVRNNFRDAV HHHHCCCCCEECEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ERAEDGGASAEELRTLLGRGRAKKGIFEGDLEEGELEIGQVSAIVSRQQSVAEVMNELVE HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AMQRAAEKKYW HHHHHHHCCCC >Mature Secondary Structure MNRITSLFGIQYPIIQGGMVWCSGWRLASAVSNAGGLGLLGAGSMHPETLREHIRKCRAA CCCHHHHHCCCCHHHCCCEEEECCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHC TDRPFGVNIPLMYPQIEEIMAIVAEEGVKIVFTSAGNPKAWTGWLHERGIIVAHVVSSSR CCCCCCCCCCEECCCHHHHHHHHHHCCCEEEEECCCCCCCEEHHHHHCCEEEEEEECCCC FAMKCEEAGVDAVVAEGFEAGGHNGREETTTFCLIPAVRSATTLPLIAAGGIGTGEGIFA CEEEHHHCCCCHHHHHCHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHH AMVLGAEGVQIGTRFALTDESSASPVFKEYCLGLGEGDTKLLLKKLAPTRLVRNNFRDAV HHHHCCCCCEECEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ERAEDGGASAEELRTLLGRGRAKKGIFEGDLEEGELEIGQVSAIVSRQQSVAEVMNELVE HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AMQRAAEKKYW HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]