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The map label for this gene is pipD [H]

Identifier: 29346959

GI number: 29346959

Start: 1910601

End: 1912238

Strand: Reverse

Name: pipD [H]

Synonym: BT_1549

Alternate gene names: 29346959

Gene position: 1912238-1910601 (Counterclockwise)

Preceding gene: 29346960

Following gene: 29346958

Centisome position: 30.55

GC content: 46.09

Gene sequence:

>1638_bases
ATGAAGAAAAGAATCATTCTATCTGCTGTCCTGTTTTTGGCGGCTTTGGCGAATTCTTTCGCTTGTACGAACCTGATTGT
CGGCAAAAATGCTTCGACTGACGGTTCGACTATTGTTTCCTATTCGGCCGACTCGTATGGCCTGTTTGGTGAGCTTTATC
ATTATCCGGCTGCTACATATCCCAAAGGGACGATGTTGAAAGTCTATGAATGGGATACGGGTAAGTATTTGGGCGAAATC
GAACAGGCACGCCAGACTTATAATGTGACTGGCAATATGAATGAATTTCAAGTGACTATCGGTGAAACCACCTTCGGCGG
ACGTCCGGAACTGGCAGATTCTACCGGAATCATCGACTACGGAAGTCTGATTTATATCGGATTGCAACGTTCACGTTCTG
CTCGCGAGGCGATCCGTATCATGACTGATTTGGTACAGCAATATGGCTATTATAGTGGAGGGGAATCGTTTACGATTGCC
GATCCGAATGAAATCTGGATTATGGAAATGATCGGTAAGGGGCCGGGGGTACGTGGTGCCGTCTGGGTGGCTGTACGTGT
ACCGGATGACTGTATTTCGGCTCATGCCAATCAATCCCGTATTCATCAGTTTGACATGAACGACAAAGAAAACTGTATCA
CTTCTCCGGATGTGATTTCCTTCGCTCGCGAGAAAGGTTACTTCAATGGAGTGAACAAGGATTTCAGCTTTGCTGAGGCT
TATGCGCCCCTTGATTTCGGTGCCCGTCGCTTCTGCGAAGCCCGTGTGTGGAGCTATTTCAATAAATATACTGACCATGG
AAATGACTATCTTCCTTATATCGAAGGAAAGACAGATACTCCGATGCCTCTTTTCGTAAAGCCGAACCGTAAACTTTCCG
TACAGGACGTGAAAGATATGATGCGTGACCACTACGAAGGAACACCGCTTGATATTTCCAATGATTTCGGTGCCGGTCCT
TATAAAACCCCGTACCGCCTTTCTCCACTGAATTTCAAGGTAGGTGATAAGGAGTATTTTAACGAACGTCCGATTTCGAC
TCAACAAAGTGGCTTCGTATTTGTTGCACAAATGCGTGCCAACAAGCCGGACCCCATAGGCGGAGTTCTTTGGTTTGGAG
TGGACGATGCGAATATGGCCGTATTTACTCCTGTTTATTGCTGTACGACGAAAGCTCCGTTATGCTATACACGTGTAGAT
GGCGCAGATTACATCACTTTCTCCTGGAATTCCGCTTTCTGGATTTTCAACTGGGTGTCTAATATGGTCTATCCACGTTA
TGATCTGATGATCGGTGACGTGCGTGCAACTCAGAAAGAGATGGAAACGACCTTTAATAATGCGCAGGAAGGTATTGAAG
AAATGGCTGCCAAATTGCTGGCAAAAGATAAGAATGCCGCAATCGCTTTCCTGACTAACTATACTAATATGACCGCCCAG
AGTACTTTTGATACTTGGAAGCAACTGGGCACTTTCCTGATTGTGAAGTACAACGACGGAGTAGTGAAGCGCGTGAAGGA
CGGACAATTTGAACGGAATTCTATCGGACAGCCTGCCGGTGTCATTCGTCCGGGATATCCGAAGGAGTTTCTGGAGGAAT
ATGTGAAGCAGACAGGAGAGAGATATTTGGTGAAATAG

Upstream 100 bases:

>100_bases
GCGGCAAGCATACCGTAGAAATGACTGTCACGGATGCTTGTGGAAATCAGACCGTTTCGAAGGAAACCTTTGTTTGGTAA
ACTATTAAAATGTATTATAT

Downstream 100 bases:

>100_bases
TTGTCAATTATTCATTAAATAACTAGGATTTATAAACTTATTCTTTTACATTTGTGTGCTCAAGACTTGGCATATATTCA
AGGATTGACAGAGAATAGAG

Product: putative secreted peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MKKRIILSAVLFLAALANSFACTNLIVGKNASTDGSTIVSYSADSYGLFGELYHYPAATYPKGTMLKVYEWDTGKYLGEI
EQARQTYNVTGNMNEFQVTIGETTFGGRPELADSTGIIDYGSLIYIGLQRSRSAREAIRIMTDLVQQYGYYSGGESFTIA
DPNEIWIMEMIGKGPGVRGAVWVAVRVPDDCISAHANQSRIHQFDMNDKENCITSPDVISFAREKGYFNGVNKDFSFAEA
YAPLDFGARRFCEARVWSYFNKYTDHGNDYLPYIEGKTDTPMPLFVKPNRKLSVQDVKDMMRDHYEGTPLDISNDFGAGP
YKTPYRLSPLNFKVGDKEYFNERPISTQQSGFVFVAQMRANKPDPIGGVLWFGVDDANMAVFTPVYCCTTKAPLCYTRVD
GADYITFSWNSAFWIFNWVSNMVYPRYDLMIGDVRATQKEMETTFNNAQEGIEEMAAKLLAKDKNAAIAFLTNYTNMTAQ
STFDTWKQLGTFLIVKYNDGVVKRVKDGQFERNSIGQPAGVIRPGYPKEFLEEYVKQTGERYLVK

Sequences:

>Translated_545_residues
MKKRIILSAVLFLAALANSFACTNLIVGKNASTDGSTIVSYSADSYGLFGELYHYPAATYPKGTMLKVYEWDTGKYLGEI
EQARQTYNVTGNMNEFQVTIGETTFGGRPELADSTGIIDYGSLIYIGLQRSRSAREAIRIMTDLVQQYGYYSGGESFTIA
DPNEIWIMEMIGKGPGVRGAVWVAVRVPDDCISAHANQSRIHQFDMNDKENCITSPDVISFAREKGYFNGVNKDFSFAEA
YAPLDFGARRFCEARVWSYFNKYTDHGNDYLPYIEGKTDTPMPLFVKPNRKLSVQDVKDMMRDHYEGTPLDISNDFGAGP
YKTPYRLSPLNFKVGDKEYFNERPISTQQSGFVFVAQMRANKPDPIGGVLWFGVDDANMAVFTPVYCCTTKAPLCYTRVD
GADYITFSWNSAFWIFNWVSNMVYPRYDLMIGDVRATQKEMETTFNNAQEGIEEMAAKLLAKDKNAAIAFLTNYTNMTAQ
STFDTWKQLGTFLIVKYNDGVVKRVKDGQFERNSIGQPAGVIRPGYPKEFLEEYVKQTGERYLVK
>Mature_545_residues
MKKRIILSAVLFLAALANSFACTNLIVGKNASTDGSTIVSYSADSYGLFGELYHYPAATYPKGTMLKVYEWDTGKYLGEI
EQARQTYNVTGNMNEFQVTIGETTFGGRPELADSTGIIDYGSLIYIGLQRSRSAREAIRIMTDLVQQYGYYSGGESFTIA
DPNEIWIMEMIGKGPGVRGAVWVAVRVPDDCISAHANQSRIHQFDMNDKENCITSPDVISFAREKGYFNGVNKDFSFAEA
YAPLDFGARRFCEARVWSYFNKYTDHGNDYLPYIEGKTDTPMPLFVKPNRKLSVQDVKDMMRDHYEGTPLDISNDFGAGP
YKTPYRLSPLNFKVGDKEYFNERPISTQQSGFVFVAQMRANKPDPIGGVLWFGVDDANMAVFTPVYCCTTKAPLCYTRVD
GADYITFSWNSAFWIFNWVSNMVYPRYDLMIGDVRATQKEMETTFNNAQEGIEEMAAKLLAKDKNAAIAFLTNYTNMTAQ
STFDTWKQLGTFLIVKYNDGVVKRVKDGQFERNSIGQPAGVIRPGYPKEFLEEYVKQTGERYLVK

Specific function: Unknown

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C69 family [H]

Homologues:

Organism=Homo sapiens, GI38504671, Length=272, Percent_Identity=28.3088235294118, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI302058287, Length=245, Percent_Identity=28.9795918367347, Blast_Score=78, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005322 [H]

Pfam domain/function: PF03577 Peptidase_C69 [H]

EC number: NA

Molecular weight: Translated: 61502; Mature: 61502

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRIILSAVLFLAALANSFACTNLIVGKNASTDGSTIVSYSADSYGLFGELYHYPAATY
CCCHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCC
PKGTMLKVYEWDTGKYLGEIEQARQTYNVTGNMNEFQVTIGETTFGGRPELADSTGIIDY
CCCCEEEEEECCCCHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEC
GSLIYIGLQRSRSAREAIRIMTDLVQQYGYYSGGESFTIADPNEIWIMEMIGKGPGVRGA
CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEE
VWVAVRVPDDCISAHANQSRIHQFDMNDKENCITSPDVISFAREKGYFNGVNKDFSFAEA
EEEEEECCHHHHHCCCCHHHEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHH
YAPLDFGARRFCEARVWSYFNKYTDHGNDYLPYIEGKTDTPMPLFVKPNRKLSVQDVKDM
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEECCCCCCCHHHHHHH
MRDHYEGTPLDISNDFGAGPYKTPYRLSPLNFKVGDKEYFNERPISTQQSGFVFVAQMRA
HHHCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCHHHHCCCCCCCCCCCEEEEEEECC
NKPDPIGGVLWFGVDDANMAVFTPVYCCTTKAPLCYTRVDGADYITFSWNSAFWIFNWVS
CCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCEEEEECCCEEEHEEHHH
NMVYPRYDLMIGDVRATQKEMETTFNNAQEGIEEMAAKLLAKDKNAAIAFLTNYTNMTAQ
HCCCCCHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH
STFDTWKQLGTFLIVKYNDGVVKRVKDGQFERNSIGQPAGVIRPGYPKEFLEEYVKQTGE
HHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
RYLVK
EECCC
>Mature Secondary Structure
MKKRIILSAVLFLAALANSFACTNLIVGKNASTDGSTIVSYSADSYGLFGELYHYPAATY
CCCHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCC
PKGTMLKVYEWDTGKYLGEIEQARQTYNVTGNMNEFQVTIGETTFGGRPELADSTGIIDY
CCCCEEEEEECCCCHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEC
GSLIYIGLQRSRSAREAIRIMTDLVQQYGYYSGGESFTIADPNEIWIMEMIGKGPGVRGA
CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEE
VWVAVRVPDDCISAHANQSRIHQFDMNDKENCITSPDVISFAREKGYFNGVNKDFSFAEA
EEEEEECCHHHHHCCCCHHHEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHH
YAPLDFGARRFCEARVWSYFNKYTDHGNDYLPYIEGKTDTPMPLFVKPNRKLSVQDVKDM
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEECCCCCCCHHHHHHH
MRDHYEGTPLDISNDFGAGPYKTPYRLSPLNFKVGDKEYFNERPISTQQSGFVFVAQMRA
HHHCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCHHHHCCCCCCCCCCCEEEEEEECC
NKPDPIGGVLWFGVDDANMAVFTPVYCCTTKAPLCYTRVDGADYITFSWNSAFWIFNWVS
CCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCEEEEECCCEEEHEEHHH
NMVYPRYDLMIGDVRATQKEMETTFNNAQEGIEEMAAKLLAKDKNAAIAFLTNYTNMTAQ
HCCCCCHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH
STFDTWKQLGTFLIVKYNDGVVKRVKDGQFERNSIGQPAGVIRPGYPKEFLEEYVKQTGE
HHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
RYLVK
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9723926 [H]