| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is pgcA [H]
Identifier: 29346958
GI number: 29346958
Start: 1908723
End: 1910468
Strand: Reverse
Name: pgcA [H]
Synonym: BT_1548
Alternate gene names: 29346958
Gene position: 1910468-1908723 (Counterclockwise)
Preceding gene: 29346959
Following gene: 29346948
Centisome position: 30.52
GC content: 44.73
Gene sequence:
>1746_bases ATGGAAAATCAGGAACTTATCAAGCAGGTCACTGAGAAAGCCGAAAAATGGCTGACCCCGGCTTATGATGCCGAAACTCA GGCTGAAGTGAAACGCATGTTGGAGAACGAAGATAAAACCGAATTGATCGAAGCATTCTACAAAGATCTTGAATTTGGAA CGGGTGGTTTGCGTGGTATCATGGGAGTAGGTAGCAACCGCATGAATATCTATACGGTAGGTGCTGCTACACAGGGCCTT TCCAACTATCTGAAGAAGAACTTCAAAGATCTGCCTCAGATTTCTGTAGTGGTTGGTCACGACTGTCGTAACAACAGCCG TCTGTTCGCTGAAACTTCAGCCAACATTTTCTCAGCTAATGGCATCAAAGTATATCTGTTTGATGATATGCGTCCGACTC CGGAGATGTCTTTCGCAATCCGTCACCTCGGTTGCCAGAGCGGTATTATCCTGACTGCTTCTCACAATCCGAAAGAATAC AACGGTTACAAAGCATACTGGGATGATGGTGCGCAAGTACTGGCTCCGCACGATGCTGGTATCATTGATGAAGTGAATAA TATCGCTTCCGCTGCTGATATCAAGTTCAAGGGGAACCCGGATCTGATTCAGATCATCGGTGAAGATATTGACAAGATTT ACCTCGATATGGTGAAGACAGTTTCTATTGATCCGGAAGCTATCGCCCGTCATAAGGATATGAAGATCGTTTATACTCCG ATTCACGGTACAGGTATGATGTTGATTCCGCGCGCTTTGAAGATGTGGGGATTCGAAAATGTATTTACTGTTCCCGAACA GATGATCAAAGACGGTAACTTCCCGACAGTAATATCTCCGAATCCGGAAAATGCCGAAGCGCTTTCTATGGCTGTCAATC TGGCTAAAGAAATTGATGCCGATCTTGTGATGGCTTCCGATCCGGATGCCGACCGTGTAGGTATCGCCTGCAAGGACGAC AAGGGAGAATGGGTACTGATCAACGGTAACCAGACTTGTATGATGTATCTTTACTATATTCTGACTCAGTACAAACAATT GGGTAAGATCAAGGGTAATGAGTTCTGTGTGAAGACTATCGTTACTACCGAACTTATCAAGAAGATTGCTGATAAGAATA ACATCGAAATGCTCGACTGCTACACCGGATTCAAGTGGATCGCACGTGAAATCCGTCTGCGTGAAGGCAAAAAGAAATAT ATCGGTGGTGGTGAAGAGAGTTACGGCTTCCTTGCCGAAGACTTCGTACGTGATAAAGATGCCGTATCAGCTTGCTGTCT GATTGCAGAAGTAGCTGCATGGGCAAAAGATAACGGTAAGTCATTGTACCAGTTGTTGCTGGATATCTACGTAGAATATG GATTCTCCAAAGAATTCACAGTGAACGTAGTGAAACCGGGCAAGAGCGGTGCTGAAGAAATCAAAGCTATGATGGAAAAC TTCCGTGCTAATCCTCCGAAAGAACTGGGTGGCTCCAAGGTGATTTTGAGCAAAGACTATAAGACGCTGAAACAGACAGA TGCAGAAGGCAAGGTGACTGACCTTGATATGCCGGAAACATCTAATGTGCTCCAATACTTCACTGAAGATGGAAGCAAAG TTTCAGTTCGCCCGTCGGGAACAGAACCGAAGATCAAATTCTATATGGAAGTACAAGGAGAAATGGGTTGTCGCAACTGT TTCGCTTCTGCTGATGCTGCTGCAATGGAAAAGATTGAAGCAGTGAAGAAGTCATTAGGTATTTGA
Upstream 100 bases:
>100_bases TAAACTTATTCTTTTACATTTGTGTGCTCAAGACTTGGCATATATTCAAGGATTGACAGAGAATAGAGAAATAATCATTA ACCAATAAACAATAATCGAA
Downstream 100 bases:
>100_bases TTCCGTTCTTCTTCTGATATTTCAGAATAGAGAAATAATAAATAACGCCTCCATAGTCTCGAAGATTATGGAGGCGTTTC TTTTATGTAACCGCCTTTTC
Product: phosphoglucomutase phosphomannomutase
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues MENQELIKQVTEKAEKWLTPAYDAETQAEVKRMLENEDKTELIEAFYKDLEFGTGGLRGIMGVGSNRMNIYTVGAATQGL SNYLKKNFKDLPQISVVVGHDCRNNSRLFAETSANIFSANGIKVYLFDDMRPTPEMSFAIRHLGCQSGIILTASHNPKEY NGYKAYWDDGAQVLAPHDAGIIDEVNNIASAADIKFKGNPDLIQIIGEDIDKIYLDMVKTVSIDPEAIARHKDMKIVYTP IHGTGMMLIPRALKMWGFENVFTVPEQMIKDGNFPTVISPNPENAEALSMAVNLAKEIDADLVMASDPDADRVGIACKDD KGEWVLINGNQTCMMYLYYILTQYKQLGKIKGNEFCVKTIVTTELIKKIADKNNIEMLDCYTGFKWIAREIRLREGKKKY IGGGEESYGFLAEDFVRDKDAVSACCLIAEVAAWAKDNGKSLYQLLLDIYVEYGFSKEFTVNVVKPGKSGAEEIKAMMEN FRANPPKELGGSKVILSKDYKTLKQTDAEGKVTDLDMPETSNVLQYFTEDGSKVSVRPSGTEPKIKFYMEVQGEMGCRNC FASADAAAMEKIEAVKKSLGI
Sequences:
>Translated_581_residues MENQELIKQVTEKAEKWLTPAYDAETQAEVKRMLENEDKTELIEAFYKDLEFGTGGLRGIMGVGSNRMNIYTVGAATQGL SNYLKKNFKDLPQISVVVGHDCRNNSRLFAETSANIFSANGIKVYLFDDMRPTPEMSFAIRHLGCQSGIILTASHNPKEY NGYKAYWDDGAQVLAPHDAGIIDEVNNIASAADIKFKGNPDLIQIIGEDIDKIYLDMVKTVSIDPEAIARHKDMKIVYTP IHGTGMMLIPRALKMWGFENVFTVPEQMIKDGNFPTVISPNPENAEALSMAVNLAKEIDADLVMASDPDADRVGIACKDD KGEWVLINGNQTCMMYLYYILTQYKQLGKIKGNEFCVKTIVTTELIKKIADKNNIEMLDCYTGFKWIAREIRLREGKKKY IGGGEESYGFLAEDFVRDKDAVSACCLIAEVAAWAKDNGKSLYQLLLDIYVEYGFSKEFTVNVVKPGKSGAEEIKAMMEN FRANPPKELGGSKVILSKDYKTLKQTDAEGKVTDLDMPETSNVLQYFTEDGSKVSVRPSGTEPKIKFYMEVQGEMGCRNC FASADAAAMEKIEAVKKSLGI >Mature_581_residues MENQELIKQVTEKAEKWLTPAYDAETQAEVKRMLENEDKTELIEAFYKDLEFGTGGLRGIMGVGSNRMNIYTVGAATQGL SNYLKKNFKDLPQISVVVGHDCRNNSRLFAETSANIFSANGIKVYLFDDMRPTPEMSFAIRHLGCQSGIILTASHNPKEY NGYKAYWDDGAQVLAPHDAGIIDEVNNIASAADIKFKGNPDLIQIIGEDIDKIYLDMVKTVSIDPEAIARHKDMKIVYTP IHGTGMMLIPRALKMWGFENVFTVPEQMIKDGNFPTVISPNPENAEALSMAVNLAKEIDADLVMASDPDADRVGIACKDD KGEWVLINGNQTCMMYLYYILTQYKQLGKIKGNEFCVKTIVTTELIKKIADKNNIEMLDCYTGFKWIAREIRLREGKKKY IGGGEESYGFLAEDFVRDKDAVSACCLIAEVAAWAKDNGKSLYQLLLDIYVEYGFSKEFTVNVVKPGKSGAEEIKAMMEN FRANPPKELGGSKVILSKDYKTLKQTDAEGKVTDLDMPETSNVLQYFTEDGSKVSVRPSGTEPKIKFYMEVQGEMGCRNC FASADAAAMEKIEAVKKSLGI
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=571, Percent_Identity=34.5008756567426, Blast_Score=322, Evalue=5e-88, Organism=Homo sapiens, GI31377548, Length=553, Percent_Identity=32.0072332730561, Blast_Score=281, Evalue=2e-75, Organism=Escherichia coli, GI1786904, Length=526, Percent_Identity=24.5247148288973, Blast_Score=76, Evalue=6e-15, Organism=Caenorhabditis elegans, GI71993870, Length=565, Percent_Identity=32.3893805309734, Blast_Score=269, Evalue=3e-72, Organism=Caenorhabditis elegans, GI71993878, Length=327, Percent_Identity=34.8623853211009, Blast_Score=184, Evalue=9e-47, Organism=Saccharomyces cerevisiae, GI6323934, Length=584, Percent_Identity=32.1917808219178, Blast_Score=271, Evalue=3e-73, Organism=Drosophila melanogaster, GI20129809, Length=560, Percent_Identity=30.8928571428571, Blast_Score=254, Evalue=2e-67, Organism=Drosophila melanogaster, GI24651977, Length=464, Percent_Identity=32.1120689655172, Blast_Score=233, Evalue=4e-61, Organism=Drosophila melanogaster, GI24653722, Length=581, Percent_Identity=29.0877796901893, Blast_Score=229, Evalue=4e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 64717; Mature: 64717
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENQELIKQVTEKAEKWLTPAYDAETQAEVKRMLENEDKTELIEAFYKDLEFGTGGLRGI CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHH MGVGSNRMNIYTVGAATQGLSNYLKKNFKDLPQISVVVGHDCRNNSRLFAETSANIFSAN HCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCEEECC GIKVYLFDDMRPTPEMSFAIRHLGCQSGIILTASHNPKEYNGYKAYWDDGAQVLAPHDAG CEEEEEECCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCEEECCCCCC IIDEVNNIASAADIKFKGNPDLIQIIGEDIDKIYLDMVKTVSIDPEAIARHKDMKIVYTP HHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEE IHGTGMMLIPRALKMWGFENVFTVPEQMIKDGNFPTVISPNPENAEALSMAVNLAKEIDA CCCCCHHHHHHHHHHCCCCCHHHCHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHCCC DLVMASDPDADRVGIACKDDKGEWVLINGNQTCMMYLYYILTQYKQLGKIKGNEFCVKTI CEEEECCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH VTTELIKKIADKNNIEMLDCYTGFKWIAREIRLREGKKKYIGGGEESYGFLAEDFVRDKD HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHCCHH AVSACCLIAEVAAWAKDNGKSLYQLLLDIYVEYGFSKEFTVNVVKPGKSGAEEIKAMMEN HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHH FRANPPKELGGSKVILSKDYKTLKQTDAEGKVTDLDMPETSNVLQYFTEDGSKVSVRPSG HCCCCCHHCCCCEEEEECCHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEECCC TEPKIKFYMEVQGEMGCRNCFASADAAAMEKIEAVKKSLGI CCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MENQELIKQVTEKAEKWLTPAYDAETQAEVKRMLENEDKTELIEAFYKDLEFGTGGLRGI CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHH MGVGSNRMNIYTVGAATQGLSNYLKKNFKDLPQISVVVGHDCRNNSRLFAETSANIFSAN HCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCEEECC GIKVYLFDDMRPTPEMSFAIRHLGCQSGIILTASHNPKEYNGYKAYWDDGAQVLAPHDAG CEEEEEECCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCEEECCCCCC IIDEVNNIASAADIKFKGNPDLIQIIGEDIDKIYLDMVKTVSIDPEAIARHKDMKIVYTP HHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEE IHGTGMMLIPRALKMWGFENVFTVPEQMIKDGNFPTVISPNPENAEALSMAVNLAKEIDA CCCCCHHHHHHHHHHCCCCCHHHCHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHCCC DLVMASDPDADRVGIACKDDKGEWVLINGNQTCMMYLYYILTQYKQLGKIKGNEFCVKTI CEEEECCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH VTTELIKKIADKNNIEMLDCYTGFKWIAREIRLREGKKKYIGGGEESYGFLAEDFVRDKD HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHCCHH AVSACCLIAEVAAWAKDNGKSLYQLLLDIYVEYGFSKEFTVNVVKPGKSGAEEIKAMMEN HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHH FRANPPKELGGSKVILSKDYKTLKQTDAEGKVTDLDMPETSNVLQYFTEDGSKVSVRPSG HCCCCCHHCCCCEEEEECCHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEECCC TEPKIKFYMEVQGEMGCRNCFASADAAAMEKIEAVKKSLGI CCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]