| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346944
Identifier: 29346944
GI number: 29346944
Start: 1893713
End: 1894339
Strand: Reverse
Name: 29346944
Synonym: BT_1534
Alternate gene names: NA
Gene position: 1894339-1893713 (Counterclockwise)
Preceding gene: 29346945
Following gene: 29346943
Centisome position: 30.26
GC content: 41.15
Gene sequence:
>627_bases ATGACAAAGAATATTTTTATAACTGCTGTTGCGGTATTATTAAGTGTAGCCCTTTGCCCGCTTTGGGCACAAAATGTGAG TGAAGATTGTAAAGTAGGCGAATTTTCCGCTATCAATCTGCGGTCGGTAGGTAACATTATTTTCACTCAGTCCGATACTT ATTCCTGTCGGATGGAAGGTCCTTTTGAATATGTCGATAAAACAAAAGTAACGGTAAAAGGAGAAACATTGGTTATCGAA TATAAGCAGAAGAATGTAAAAAACGTTAAGAACCTGACGTTCTATATCACAGCCCCTGATTTGAAGAGTGTAAAGATCGA TGGTGTCGGCAACTTCAATGCTAAAGAAACCCTGAAACTGAAAAATGTAACTTTCAAACTCGATGGAGTGGGAAACTGTG AGGTGAAAAAGCTCCATTGTGATGAGTTGGAATTAATGGTAGACGGGGTAGGGAATATGAATGTCAATGTAAACTGCAAT ACTGTGAAAGCCAAAGTGGATGGAGTCGGAAATATCAAATTGTCCGGCAAGGCAGACAGAGCTTCTCTGAAGCGTGACGG AGTAGGCAGAATCAATCATAAAGGCCTGAAATGCCCGGATGTGAGCACGAAAGGCTGGGGATTCTGA
Upstream 100 bases:
>100_bases CGCATAATGAAGAACAGGCGAAACAGACTTCAAGAACTATCCGTTTCTTCGATGGCCGTCAGGTACAGTAATCCCCTTTT AAACTCTAAAAAAGCTAATC
Downstream 100 bases:
>100_bases TAAGTATGAAAATGAATGAGAAGATAATGAGATTACAATGATAAAACTCTATTTCAAACAAGCATTTCACCTGTTGAAGG AGAATAAGTTACTTTCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTKNIFITAVAVLLSVALCPLWAQNVSEDCKVGEFSAINLRSVGNIIFTQSDTYSCRMEGPFEYVDKTKVTVKGETLVIE YKQKNVKNVKNLTFYITAPDLKSVKIDGVGNFNAKETLKLKNVTFKLDGVGNCEVKKLHCDELELMVDGVGNMNVNVNCN TVKAKVDGVGNIKLSGKADRASLKRDGVGRINHKGLKCPDVSTKGWGF
Sequences:
>Translated_208_residues MTKNIFITAVAVLLSVALCPLWAQNVSEDCKVGEFSAINLRSVGNIIFTQSDTYSCRMEGPFEYVDKTKVTVKGETLVIE YKQKNVKNVKNLTFYITAPDLKSVKIDGVGNFNAKETLKLKNVTFKLDGVGNCEVKKLHCDELELMVDGVGNMNVNVNCN TVKAKVDGVGNIKLSGKADRASLKRDGVGRINHKGLKCPDVSTKGWGF >Mature_207_residues TKNIFITAVAVLLSVALCPLWAQNVSEDCKVGEFSAINLRSVGNIIFTQSDTYSCRMEGPFEYVDKTKVTVKGETLVIEY KQKNVKNVKNLTFYITAPDLKSVKIDGVGNFNAKETLKLKNVTFKLDGVGNCEVKKLHCDELELMVDGVGNMNVNVNCNT VKAKVDGVGNIKLSGKADRASLKRDGVGRINHKGLKCPDVSTKGWGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22782; Mature: 22650
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNIFITAVAVLLSVALCPLWAQNVSEDCKVGEFSAINLRSVGNIIFTQSDTYSCRMEG CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEEECC PFEYVDKTKVTVKGETLVIEYKQKNVKNVKNLTFYITAPDLKSVKIDGVGNFNAKETLKL CHHHCCCEEEEECCCEEEEEECCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCEEEE KNVTFKLDGVGNCEVKKLHCDELELMVDGVGNMNVNVNCNTVKAKVDGVGNIKLSGKADR EEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEEEEEEEEECCCEEEEECCCCCH ASLKRDGVGRINHKGLKCPDVSTKGWGF HHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKNIFITAVAVLLSVALCPLWAQNVSEDCKVGEFSAINLRSVGNIIFTQSDTYSCRMEG CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEEECC PFEYVDKTKVTVKGETLVIEYKQKNVKNVKNLTFYITAPDLKSVKIDGVGNFNAKETLKL CHHHCCCEEEEECCCEEEEEECCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCEEEE KNVTFKLDGVGNCEVKKLHCDELELMVDGVGNMNVNVNCNTVKAKVDGVGNIKLSGKADR EEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEEEEEEEEECCCEEEEECCCCCH ASLKRDGVGRINHKGLKCPDVSTKGWGF HHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA