Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346944

Identifier: 29346944

GI number: 29346944

Start: 1893713

End: 1894339

Strand: Reverse

Name: 29346944

Synonym: BT_1534

Alternate gene names: NA

Gene position: 1894339-1893713 (Counterclockwise)

Preceding gene: 29346945

Following gene: 29346943

Centisome position: 30.26

GC content: 41.15

Gene sequence:

>627_bases
ATGACAAAGAATATTTTTATAACTGCTGTTGCGGTATTATTAAGTGTAGCCCTTTGCCCGCTTTGGGCACAAAATGTGAG
TGAAGATTGTAAAGTAGGCGAATTTTCCGCTATCAATCTGCGGTCGGTAGGTAACATTATTTTCACTCAGTCCGATACTT
ATTCCTGTCGGATGGAAGGTCCTTTTGAATATGTCGATAAAACAAAAGTAACGGTAAAAGGAGAAACATTGGTTATCGAA
TATAAGCAGAAGAATGTAAAAAACGTTAAGAACCTGACGTTCTATATCACAGCCCCTGATTTGAAGAGTGTAAAGATCGA
TGGTGTCGGCAACTTCAATGCTAAAGAAACCCTGAAACTGAAAAATGTAACTTTCAAACTCGATGGAGTGGGAAACTGTG
AGGTGAAAAAGCTCCATTGTGATGAGTTGGAATTAATGGTAGACGGGGTAGGGAATATGAATGTCAATGTAAACTGCAAT
ACTGTGAAAGCCAAAGTGGATGGAGTCGGAAATATCAAATTGTCCGGCAAGGCAGACAGAGCTTCTCTGAAGCGTGACGG
AGTAGGCAGAATCAATCATAAAGGCCTGAAATGCCCGGATGTGAGCACGAAAGGCTGGGGATTCTGA

Upstream 100 bases:

>100_bases
CGCATAATGAAGAACAGGCGAAACAGACTTCAAGAACTATCCGTTTCTTCGATGGCCGTCAGGTACAGTAATCCCCTTTT
AAACTCTAAAAAAGCTAATC

Downstream 100 bases:

>100_bases
TAAGTATGAAAATGAATGAGAAGATAATGAGATTACAATGATAAAACTCTATTTCAAACAAGCATTTCACCTGTTGAAGG
AGAATAAGTTACTTTCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTKNIFITAVAVLLSVALCPLWAQNVSEDCKVGEFSAINLRSVGNIIFTQSDTYSCRMEGPFEYVDKTKVTVKGETLVIE
YKQKNVKNVKNLTFYITAPDLKSVKIDGVGNFNAKETLKLKNVTFKLDGVGNCEVKKLHCDELELMVDGVGNMNVNVNCN
TVKAKVDGVGNIKLSGKADRASLKRDGVGRINHKGLKCPDVSTKGWGF

Sequences:

>Translated_208_residues
MTKNIFITAVAVLLSVALCPLWAQNVSEDCKVGEFSAINLRSVGNIIFTQSDTYSCRMEGPFEYVDKTKVTVKGETLVIE
YKQKNVKNVKNLTFYITAPDLKSVKIDGVGNFNAKETLKLKNVTFKLDGVGNCEVKKLHCDELELMVDGVGNMNVNVNCN
TVKAKVDGVGNIKLSGKADRASLKRDGVGRINHKGLKCPDVSTKGWGF
>Mature_207_residues
TKNIFITAVAVLLSVALCPLWAQNVSEDCKVGEFSAINLRSVGNIIFTQSDTYSCRMEGPFEYVDKTKVTVKGETLVIEY
KQKNVKNVKNLTFYITAPDLKSVKIDGVGNFNAKETLKLKNVTFKLDGVGNCEVKKLHCDELELMVDGVGNMNVNVNCNT
VKAKVDGVGNIKLSGKADRASLKRDGVGRINHKGLKCPDVSTKGWGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22782; Mature: 22650

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNIFITAVAVLLSVALCPLWAQNVSEDCKVGEFSAINLRSVGNIIFTQSDTYSCRMEG
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEEECC
PFEYVDKTKVTVKGETLVIEYKQKNVKNVKNLTFYITAPDLKSVKIDGVGNFNAKETLKL
CHHHCCCEEEEECCCEEEEEECCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCEEEE
KNVTFKLDGVGNCEVKKLHCDELELMVDGVGNMNVNVNCNTVKAKVDGVGNIKLSGKADR
EEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEEEEEEEEECCCEEEEECCCCCH
ASLKRDGVGRINHKGLKCPDVSTKGWGF
HHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKNIFITAVAVLLSVALCPLWAQNVSEDCKVGEFSAINLRSVGNIIFTQSDTYSCRMEG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEEECC
PFEYVDKTKVTVKGETLVIEYKQKNVKNVKNLTFYITAPDLKSVKIDGVGNFNAKETLKL
CHHHCCCEEEEECCCEEEEEECCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCEEEE
KNVTFKLDGVGNCEVKKLHCDELELMVDGVGNMNVNVNCNTVKAKVDGVGNIKLSGKADR
EEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEEEEEEEEECCCEEEEECCCCCH
ASLKRDGVGRINHKGLKCPDVSTKGWGF
HHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA