| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346931
Identifier: 29346931
GI number: 29346931
Start: 1876252
End: 1877181
Strand: Reverse
Name: 29346931
Synonym: BT_1521
Alternate gene names: NA
Gene position: 1877181-1876252 (Counterclockwise)
Preceding gene: 29346932
Following gene: 29346923
Centisome position: 29.99
GC content: 46.02
Gene sequence:
>930_bases ATGATATTCACTTTCGATATGGATTATCAGGAACTTTGGGCAAATTTGAAAAGGGCAGGAGTATATTTGCCTTTGGTATT ATTGCTGTGGCTGTTCGTTTATCTGATTAATACTACATCGTGGTACATCATTATACGTAGCGGAGGGAAGCCGGGGTTTT CATTTGCCCGGCTTTATAAGTTTACCGTTACGGGTTTTGCCCTGAATTACGTAACTCCCGTCGGACTGATGGGCGGTGAG CCGTATCGCATCATGGAACTGAAACCGTATATAGGAGTGGAGAGAGCCACTTCTTCGGTGATTCTCTACGTGATGATGCA CATCTTTTCTCATTTCTGCTTTTGGCTGAGTTCTGTCTTGCTATACCTTTGCCTTTATCCGGTAGGGTGGGTGATGGGAA CCATTTTGGGTACGATCACCGTCTTCTGCCTGCTGGTAGCTATGTTGTTTGTAAAAGGCTATCAGCATGGGATGGCAGTT GCTTTCGTTCGTCTGGGCAGTCATCTTCCTTTTCTGAAAAAGAAAGTAATCCGTTTTGCCGACTCCCATCGGGAACAGTT GGAGAACATAGATAAACAGATAGCCTTGCTTCATCAACAGAAGAAGGGAGCTTTTTATGCGGCTTTATTCTTGGAATATA CGGCACGTGTGGTCAGTTGTCTGGAAATCTGGCTGATCCTCAATGTGCTGACAAGGAGTGTCAGTTTTGCAGATTGCTGC CTGATTGCTGCCTTCTCTTCTTTACTAGCCAATCTTTTGTTCTTCTTGCCTATGCAGTTGGGTGGCCGTGAGGGAGGATT TGCCCTTGCGGTAGGCGGGCTTTCCCTTTCCGGAGCTTATGGAGTCTATGCGGCATTGATCACTCGCGTGCGTGAGATGG TCTGGATTGTGATAGGGCTTGCTTTGATGAAGGTTGGAAATAAAAAGTAG
Upstream 100 bases:
>100_bases GATTCAGAAACTTCTTTGACCGATATTATCAGTATATTAAATAGTGAAGAACAAATACCGCAATATATTCCTGGCTTTTG GCATTGTCGCCGTCCTGATC
Downstream 100 bases:
>100_bases CCTTATTTTACTATAATTTCCCAGTATCCGTTTTTATTTGATCCAACTCGCTGAATCATACCTTTTTGCTTTAATGATGT GATCAGACGTTCGCTATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MIFTFDMDYQELWANLKRAGVYLPLVLLLWLFVYLINTTSWYIIIRSGGKPGFSFARLYKFTVTGFALNYVTPVGLMGGE PYRIMELKPYIGVERATSSVILYVMMHIFSHFCFWLSSVLLYLCLYPVGWVMGTILGTITVFCLLVAMLFVKGYQHGMAV AFVRLGSHLPFLKKKVIRFADSHREQLENIDKQIALLHQQKKGAFYAALFLEYTARVVSCLEIWLILNVLTRSVSFADCC LIAAFSSLLANLLFFLPMQLGGREGGFALAVGGLSLSGAYGVYAALITRVREMVWIVIGLALMKVGNKK
Sequences:
>Translated_309_residues MIFTFDMDYQELWANLKRAGVYLPLVLLLWLFVYLINTTSWYIIIRSGGKPGFSFARLYKFTVTGFALNYVTPVGLMGGE PYRIMELKPYIGVERATSSVILYVMMHIFSHFCFWLSSVLLYLCLYPVGWVMGTILGTITVFCLLVAMLFVKGYQHGMAV AFVRLGSHLPFLKKKVIRFADSHREQLENIDKQIALLHQQKKGAFYAALFLEYTARVVSCLEIWLILNVLTRSVSFADCC LIAAFSSLLANLLFFLPMQLGGREGGFALAVGGLSLSGAYGVYAALITRVREMVWIVIGLALMKVGNKK >Mature_309_residues MIFTFDMDYQELWANLKRAGVYLPLVLLLWLFVYLINTTSWYIIIRSGGKPGFSFARLYKFTVTGFALNYVTPVGLMGGE PYRIMELKPYIGVERATSSVILYVMMHIFSHFCFWLSSVLLYLCLYPVGWVMGTILGTITVFCLLVAMLFVKGYQHGMAV AFVRLGSHLPFLKKKVIRFADSHREQLENIDKQIALLHQQKKGAFYAALFLEYTARVVSCLEIWLILNVLTRSVSFADCC LIAAFSSLLANLLFFLPMQLGGREGGFALAVGGLSLSGAYGVYAALITRVREMVWIVIGLALMKVGNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34805; Mature: 34805
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFTFDMDYQELWANLKRAGVYLPLVLLLWLFVYLINTTSWYIIIRSGGKPGFSFARLYK CEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH FTVTGFALNYVTPVGLMGGEPYRIMELKPYIGVERATSSVILYVMMHIFSHFCFWLSSVL HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYLCLYPVGWVMGTILGTITVFCLLVAMLFVKGYQHGMAVAFVRLGSHLPFLKKKVIRFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH DSHREQLENIDKQIALLHQQKKGAFYAALFLEYTARVVSCLEIWLILNVLTRSVSFADCC HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH LIAAFSSLLANLLFFLPMQLGGREGGFALAVGGLSLSGAYGVYAALITRVREMVWIVIGL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALMKVGNKK HHHHHCCCC >Mature Secondary Structure MIFTFDMDYQELWANLKRAGVYLPLVLLLWLFVYLINTTSWYIIIRSGGKPGFSFARLYK CEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH FTVTGFALNYVTPVGLMGGEPYRIMELKPYIGVERATSSVILYVMMHIFSHFCFWLSSVL HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYLCLYPVGWVMGTILGTITVFCLLVAMLFVKGYQHGMAVAFVRLGSHLPFLKKKVIRFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH DSHREQLENIDKQIALLHQQKKGAFYAALFLEYTARVVSCLEIWLILNVLTRSVSFADCC HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH LIAAFSSLLANLLFFLPMQLGGREGGFALAVGGLSLSGAYGVYAALITRVREMVWIVIGL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALMKVGNKK HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA