| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346718
Identifier: 29346718
GI number: 29346718
Start: 1632401
End: 1633600
Strand: Reverse
Name: 29346718
Synonym: BT_1308
Alternate gene names: NA
Gene position: 1633600-1632401 (Counterclockwise)
Preceding gene: 29346719
Following gene: 29346717
Centisome position: 26.09
GC content: 36.42
Gene sequence:
>1200_bases ATGATGAAAAAGATTAAAATATTATCCCTTTTGGTGTGTTTGATTGCTCTATTTACGGCTTGTCATGATGAAGAGGATAA AACTAATTATGGTTCGCGTACTGTGTTAGTTTATATTGCGGGTGACAACTCTCTTTCTCGTTTTGCCAGTGAAGATTTAA ATGAAATGATAGAAGGTATGCAGAGTGTGGATGATAATCACAACAATCTGCTGGTTTATATGGATAAAGGTTCGAATCCC AAGCTGATTCGTTTGAGAAAAGATAAAGACGTAGTAGTGCAAGATGTTATTGCCACTTATGATGCACAGAATTCTGTCGA TGTTGATGTTATGAAGAATGTTTTTACAACAGCTTTTTCTCATTATCCGGCGGACAGCTATGGTGTTGTCTTTTGGTCGC ATGGTGATGGTTGGCTTCCTTATAATAATCCTTCTACTCGTTGGTGGGGACAGGATACTGGTAATGGAGATAACAGAATG AATATCCCTGATTTAAATGAAGCATTATCTGTAGCTCCTCATTTTGATTTTATATTATTTGATGCTTGTTATATGCAATC TGTTGAGGTCGTTTATCAATTACGTAATCGAGCTGATTATTTTATTGGTTCTCCGACAGAAATACCAGGTCCCGGAGCCC CTTATGAGGTAGTGGTTCCTGCATTGTTTGCTGTGAATAGTCCGGCTGTTAGTATTGCAGAAAATTATTATTCTGTTTAT GCTAAAAAATATAATAGTACCGGTGCCGGCATTTCAAATGAAAATTGGACAGGAGGAGTTTCGATTTCTGTTATAAAAAG TAGTGAGTTATCGGCATTAGCTGCTGCTACGAGAGATGTTTTGCAAACAGCGGTCTCTATGCAGCAGTCGCATAATATCG ATATTTCTAGTATATTGTGCTATGATCCTTTACGTGAAAATAATTATCATGATTTGATGGGGCTGATGCAGTCAATACAA GGAAACTCACAAGCTTTTAATCATTACAAAGAAATGTATAAGAATGCTGTTATATGGAAAAATACTACAGATAATAATTA TTGTACATATTCATCGGGCTATGGTAAGATGGTTTCTATGGATGGATTTGAAGGAGTCTCTACTTATATATTGCGTGAAA ATAATTCTAGCCAGGAGAAATATTATCGTCAATTTGTGGAATGGTATTCTGCTGCCGATTGGGATTCTGTTGATTGGTAG
Upstream 100 bases:
>100_bases TATAAAACCGGAAGAGTAAGAGATTTATTGTTAATATGATAAGAGATGCAAGTTTGCATCTCTTATTTTTTTATCTTTGC GGTCATAACAAATGAAGAAT
Downstream 100 bases:
>100_bases TTCTAAGGTTGGTGATATTTGATTAATAACTTATATTTATTGTTCAGCTGAAATGAAAATTCTTTTAATGAGAAATTGTT TTCGGTTTATCATATTTCTT
Product: clostripain-related protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MMKKIKILSLLVCLIALFTACHDEEDKTNYGSRTVLVYIAGDNSLSRFASEDLNEMIEGMQSVDDNHNNLLVYMDKGSNP KLIRLRKDKDVVVQDVIATYDAQNSVDVDVMKNVFTTAFSHYPADSYGVVFWSHGDGWLPYNNPSTRWWGQDTGNGDNRM NIPDLNEALSVAPHFDFILFDACYMQSVEVVYQLRNRADYFIGSPTEIPGPGAPYEVVVPALFAVNSPAVSIAENYYSVY AKKYNSTGAGISNENWTGGVSISVIKSSELSALAAATRDVLQTAVSMQQSHNIDISSILCYDPLRENNYHDLMGLMQSIQ GNSQAFNHYKEMYKNAVIWKNTTDNNYCTYSSGYGKMVSMDGFEGVSTYILRENNSSQEKYYRQFVEWYSAADWDSVDW
Sequences:
>Translated_399_residues MMKKIKILSLLVCLIALFTACHDEEDKTNYGSRTVLVYIAGDNSLSRFASEDLNEMIEGMQSVDDNHNNLLVYMDKGSNP KLIRLRKDKDVVVQDVIATYDAQNSVDVDVMKNVFTTAFSHYPADSYGVVFWSHGDGWLPYNNPSTRWWGQDTGNGDNRM NIPDLNEALSVAPHFDFILFDACYMQSVEVVYQLRNRADYFIGSPTEIPGPGAPYEVVVPALFAVNSPAVSIAENYYSVY AKKYNSTGAGISNENWTGGVSISVIKSSELSALAAATRDVLQTAVSMQQSHNIDISSILCYDPLRENNYHDLMGLMQSIQ GNSQAFNHYKEMYKNAVIWKNTTDNNYCTYSSGYGKMVSMDGFEGVSTYILRENNSSQEKYYRQFVEWYSAADWDSVDW >Mature_399_residues MMKKIKILSLLVCLIALFTACHDEEDKTNYGSRTVLVYIAGDNSLSRFASEDLNEMIEGMQSVDDNHNNLLVYMDKGSNP KLIRLRKDKDVVVQDVIATYDAQNSVDVDVMKNVFTTAFSHYPADSYGVVFWSHGDGWLPYNNPSTRWWGQDTGNGDNRM NIPDLNEALSVAPHFDFILFDACYMQSVEVVYQLRNRADYFIGSPTEIPGPGAPYEVVVPALFAVNSPAVSIAENYYSVY AKKYNSTGAGISNENWTGGVSISVIKSSELSALAAATRDVLQTAVSMQQSHNIDISSILCYDPLRENNYHDLMGLMQSIQ GNSQAFNHYKEMYKNAVIWKNTTDNNYCTYSSGYGKMVSMDGFEGVSTYILRENNSSQEKYYRQFVEWYSAADWDSVDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44943; Mature: 44943
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKIKILSLLVCLIALFTACHDEEDKTNYGSRTVLVYIAGDNSLSRFASEDLNEMIEGM CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHH QSVDDNHNNLLVYMDKGSNPKLIRLRKDKDVVVQDVIATYDAQNSVDVDVMKNVFTTAFS HHCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH HYPADSYGVVFWSHGDGWLPYNNPSTRWWGQDTGNGDNRMNIPDLNEALSVAPHFDFILF CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHH DACYMQSVEVVYQLRNRADYFIGSPTEIPGPGAPYEVVVPALFAVNSPAVSIAENYYSVY HHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH AKKYNSTGAGISNENWTGGVSISVIKSSELSALAAATRDVLQTAVSMQQSHNIDISSILC HHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEE YDPLRENNYHDLMGLMQSIQGNSQAFNHYKEMYKNAVIWKNTTDNNYCTYSSGYGKMVSM ECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCEEEC DGFEGVSTYILRENNSSQEKYYRQFVEWYSAADWDSVDW CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MMKKIKILSLLVCLIALFTACHDEEDKTNYGSRTVLVYIAGDNSLSRFASEDLNEMIEGM CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHH QSVDDNHNNLLVYMDKGSNPKLIRLRKDKDVVVQDVIATYDAQNSVDVDVMKNVFTTAFS HHCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH HYPADSYGVVFWSHGDGWLPYNNPSTRWWGQDTGNGDNRMNIPDLNEALSVAPHFDFILF CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHH DACYMQSVEVVYQLRNRADYFIGSPTEIPGPGAPYEVVVPALFAVNSPAVSIAENYYSVY HHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH AKKYNSTGAGISNENWTGGVSISVIKSSELSALAAATRDVLQTAVSMQQSHNIDISSILC HHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEE YDPLRENNYHDLMGLMQSIQGNSQAFNHYKEMYKNAVIWKNTTDNNYCTYSSGYGKMVSM ECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCEEEC DGFEGVSTYILRENNSSQEKYYRQFVEWYSAADWDSVDW CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA