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The map label for this gene is chbR [C]

Identifier: 29346405

GI number: 29346405

Start: 1230974

End: 1231819

Strand: Reverse

Name: chbR [C]

Synonym: BT_0995

Alternate gene names: 29346405

Gene position: 1231819-1230974 (Counterclockwise)

Preceding gene: 29346406

Following gene: 29346403

Centisome position: 19.68

GC content: 36.64

Gene sequence:

>846_bases
ATGGAAAGCGATATACCGAGGTACGATTTAACAGTTGATTATATAGTGGGAGAAGGATTTGGGATAAACTTACTGAATGG
GTATAAGAATTTTCATTGTAAAATAGAGGCAGGATTCTTCATACTTTGTGTGAAAGGGACAATACAGGCAACAATTAATG
GAGAACGATATAATATTGTCGAAAATGATTTAATCACTCTGCCACCTAATTATTTCATGGAAATTCATGAGTTTTCATCT
GATATTCATATTTATTATGCAGGCTTTTCATCTCAGTTCATAGAAAATATAAATCTGATGAAGTCCACCCAGCATCTGCT
TCCGATAATAGTAGAAAATCCGGTTATCAATTTGTCTCCATTGCAAGCCTGTAGCTATAAGATGTTTTATGAGTCATTGA
TTCTTGCGTATGCTTCTGCCAAGACATTGGCCAATAAAGAAATCGTAAAGGCTGTACTCACTATGTTTATTCAGGGGGCA
ACAGAGATTTATAAGCTACAGAGCAATCGGTATTTATCTACTCAATCAAGAAAGTATGAGATATATCAGGAGTTCCTGCA
ACTGGTCATGAAGAATTATACAGTTCATCATGGTGCCTCTTTTTATGCTGATCATTTGGGACTTAGTCTGCCTCATTTTT
GTTCAACAATTAAAAAGGCAGCGGGGAATACCCCGCTGGAAGTCATTGCTTCCGTCATTCTGATGGATGCTAAGTCTCGT
TTAAAGTCAAGTAATGAACCTGTGAAGAATATCGCTTTGTCTTTGGGATTCAATAATATCTCTTTCTTCAATAAATTCTT
TAAGCAGCATACCGGTGTCACTCCGCAGGAATACAGAGGACATTAA

Upstream 100 bases:

>100_bases
ATATATATGTTATTTTTTTATGATTCGATAGTCAGATTTTAATTATTTCGAGCGTAGATTTTAAATAATCTCTATATTTG
AAGTAAAAAACAAAATAACG

Downstream 100 bases:

>100_bases
TCTTCTGTCTGCCTTTCAAATGGAAGAGTAACGATAAACCGGCTGCCTTTTCCCATTTCAGACTCTACAGAGATGTCTCC
TTGCAGATGTTCTACGATTG

Product: AraC family transcription regulator

Products: NA

Alternate protein names: AraC-Type Transcription Regulator; AraC Family Transcriptional Regulator; Transcriptional Regulator AraC Family; Transcription Regulator; Transcription Regulator AraC-Type; AraC-Type Transcriptional Regulator

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MESDIPRYDLTVDYIVGEGFGINLLNGYKNFHCKIEAGFFILCVKGTIQATINGERYNIVENDLITLPPNYFMEIHEFSS
DIHIYYAGFSSQFIENINLMKSTQHLLPIIVENPVINLSPLQACSYKMFYESLILAYASAKTLANKEIVKAVLTMFIQGA
TEIYKLQSNRYLSTQSRKYEIYQEFLQLVMKNYTVHHGASFYADHLGLSLPHFCSTIKKAAGNTPLEVIASVILMDAKSR
LKSSNEPVKNIALSLGFNNISFFNKFFKQHTGVTPQEYRGH

Sequences:

>Translated_281_residues
MESDIPRYDLTVDYIVGEGFGINLLNGYKNFHCKIEAGFFILCVKGTIQATINGERYNIVENDLITLPPNYFMEIHEFSS
DIHIYYAGFSSQFIENINLMKSTQHLLPIIVENPVINLSPLQACSYKMFYESLILAYASAKTLANKEIVKAVLTMFIQGA
TEIYKLQSNRYLSTQSRKYEIYQEFLQLVMKNYTVHHGASFYADHLGLSLPHFCSTIKKAAGNTPLEVIASVILMDAKSR
LKSSNEPVKNIALSLGFNNISFFNKFFKQHTGVTPQEYRGH
>Mature_281_residues
MESDIPRYDLTVDYIVGEGFGINLLNGYKNFHCKIEAGFFILCVKGTIQATINGERYNIVENDLITLPPNYFMEIHEFSS
DIHIYYAGFSSQFIENINLMKSTQHLLPIIVENPVINLSPLQACSYKMFYESLILAYASAKTLANKEIVKAVLTMFIQGA
TEIYKLQSNRYLSTQSRKYEIYQEFLQLVMKNYTVHHGASFYADHLGLSLPHFCSTIKKAAGNTPLEVIASVILMDAKSR
LKSSNEPVKNIALSLGFNNISFFNKFFKQHTGVTPQEYRGH

Specific function: Repressor For The Chbbcarfg Operon (Probable). [C]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31945; Mature: 31945

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESDIPRYDLTVDYIVGEGFGINLLNGYKNFHCKIEAGFFILCVKGTIQATINGERYNIV
CCCCCCCCCEEEEEEECCCCCEEEECCCCCEEEEEECCEEEEEECCEEEEEECCCEEEEE
ENDLITLPPNYFMEIHEFSSDIHIYYAGFSSQFIENINLMKSTQHLLPIIVENPVINLSP
CCCEEECCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCEEEECCCEECCCH
LQACSYKMFYESLILAYASAKTLANKEIVKAVLTMFIQGATEIYKLQSNRYLSTQSRKYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEECCCHHHHH
IYQEFLQLVMKNYTVHHGASFYADHLGLSLPHFCSTIKKAAGNTPLEVIASVILMDAKSR
HHHHHHHHHHHHCCEECCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LKSSNEPVKNIALSLGFNNISFFNKFFKQHTGVTPQEYRGH
HCCCCCCHHHHEEECCCCHHHHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MESDIPRYDLTVDYIVGEGFGINLLNGYKNFHCKIEAGFFILCVKGTIQATINGERYNIV
CCCCCCCCCEEEEEEECCCCCEEEECCCCCEEEEEECCEEEEEECCEEEEEECCCEEEEE
ENDLITLPPNYFMEIHEFSSDIHIYYAGFSSQFIENINLMKSTQHLLPIIVENPVINLSP
CCCEEECCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCEEEECCCEECCCH
LQACSYKMFYESLILAYASAKTLANKEIVKAVLTMFIQGATEIYKLQSNRYLSTQSRKYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEECCCHHHHH
IYQEFLQLVMKNYTVHHGASFYADHLGLSLPHFCSTIKKAAGNTPLEVIASVILMDAKSR
HHHHHHHHHHHHCCEECCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LKSSNEPVKNIALSLGFNNISFFNKFFKQHTGVTPQEYRGH
HCCCCCCHHHHEEECCCCHHHHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA