| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346297
Identifier: 29346297
GI number: 29346297
Start: 1089593
End: 1090042
Strand: Reverse
Name: 29346297
Synonym: BT_0887
Alternate gene names: NA
Gene position: 1090042-1089593 (Counterclockwise)
Preceding gene: 29346303
Following gene: 29346291
Centisome position: 17.41
GC content: 40.67
Gene sequence:
>450_bases ATGTTATCGTTAAACCTACCAGTATTCGACACTAAAATAAACGTACGAAACGGAAAAAATGTAATTTTCGACGTGATTCG CAAACGATATGTCGCACTTACCCCGGAAGAATGGGTACGGCAACACTTTGTTCACTTTCTTATTGCACACAAAGGATATC CGAACGCACTCCTTGCCAACGAAGTAATGGTAAAGCTGAACGGCACAACTAAAAGATGTGATACGGTGCTTTACCGGAGA GACCTTTCAGCACGAATGATCGTAGAATACAAAGCTCCGCACATCGAAATCACACAAGCGGTATTCGATCAGATAACCCG CTATAATATGGTGTTGAAAGTTGATTATCTGATAGTAAGTAATGGAATGCAGCATTATTGTTGCCGGATGGATTATGCAC ATCAGAGCTATACCTTTCTTCAGGATATTCCCGATTATAATGCCCTATAA
Upstream 100 bases:
>100_bases GCAGCCAATTAGCTACGATTTCTTCTTTCGTTTTCATAATTATCTATTAAATTTGTGGTTCCAATAATGGAAACCGTTAT TTAACTTACAAAAATAATAA
Downstream 100 bases:
>100_bases AGATAGTGTCACTATAAGGTCAGGATACTTACACTATACCACACACATAGTGTAAGTATCCCAAGCACATAGTGACACCA TCTTTGTCTTGCCTCCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MLSLNLPVFDTKINVRNGKNVIFDVIRKRYVALTPEEWVRQHFVHFLIAHKGYPNALLANEVMVKLNGTTKRCDTVLYRR DLSARMIVEYKAPHIEITQAVFDQITRYNMVLKVDYLIVSNGMQHYCCRMDYAHQSYTFLQDIPDYNAL
Sequences:
>Translated_149_residues MLSLNLPVFDTKINVRNGKNVIFDVIRKRYVALTPEEWVRQHFVHFLIAHKGYPNALLANEVMVKLNGTTKRCDTVLYRR DLSARMIVEYKAPHIEITQAVFDQITRYNMVLKVDYLIVSNGMQHYCCRMDYAHQSYTFLQDIPDYNAL >Mature_149_residues MLSLNLPVFDTKINVRNGKNVIFDVIRKRYVALTPEEWVRQHFVHFLIAHKGYPNALLANEVMVKLNGTTKRCDTVLYRR DLSARMIVEYKAPHIEITQAVFDQITRYNMVLKVDYLIVSNGMQHYCCRMDYAHQSYTFLQDIPDYNAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17531; Mature: 17531
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLNLPVFDTKINVRNGKNVIFDVIRKRYVALTPEEWVRQHFVHFLIAHKGYPNALLAN CEECCCCEEEEEEEECCCCHHHHHHHHHHHEEECHHHHHHHHHHHHHHHCCCCCCCEECC EVMVKLNGTTKRCDTVLYRRDLSARMIVEYKAPHIEITQAVFDQITRYNMVLKVDYLIVS EEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHHHEEEEEEEEEEEC NGMQHYCCRMDYAHQSYTFLQDIPDYNAL CCHHHHHHHCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MLSLNLPVFDTKINVRNGKNVIFDVIRKRYVALTPEEWVRQHFVHFLIAHKGYPNALLAN CEECCCCEEEEEEEECCCCHHHHHHHHHHHEEECHHHHHHHHHHHHHHHCCCCCCCEECC EVMVKLNGTTKRCDTVLYRRDLSARMIVEYKAPHIEITQAVFDQITRYNMVLKVDYLIVS EEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHHHEEEEEEEEEEEC NGMQHYCCRMDYAHQSYTFLQDIPDYNAL CCHHHHHHHCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA