| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is zraS [H]
Identifier: 29346265
GI number: 29346265
Start: 1043365
End: 1044642
Strand: Reverse
Name: zraS [H]
Synonym: BT_0855
Alternate gene names: 29346265
Gene position: 1044642-1043365 (Counterclockwise)
Preceding gene: 29346266
Following gene: 29346263
Centisome position: 16.69
GC content: 39.67
Gene sequence:
>1278_bases ATGAAACGATTTGCATTCAGAGTAATTTTACATATTTTACTGATAGTATTGTTTTCTATCGGCAGCTACCTGCTATTTCA AAAGCAGTTATGGTTCAGTACTACCATCTGCCTTATATTACTGATAACCATTGGAATACATCTTTACCGTATGCAGTTCA AACAAATTGCTCTGTTGCGACGATTGACAGACGGCCTCCGCTATAATGACATGATGCAAACTTTCCATCCACCTTTCAAT AACAAAATAATGAATGAATGGGCGGAAGAACTTTCGGATACTTTAAAAGATTTTCGGGGAAGATTGCTGGCAGAAGAGAT CAAGCACCAATACTACGAGAACTTATTGAACAAAGTTGATACGGCAGTGCTTGTTGCCGATAAAGCCGGACATATAGAAT GGATGAATCAGGCGGCCGTTACCCACTTAGGACAAATATCACAATTGCCGGAAACATTGCTGAAAGCTTCTGTTGCCCAT GACACCCCCGTCATCCGTATCGAACAAAATAGCACTGTGCTGGAAATGGCCATATCACGCACTACATTTGCCACTCAAGG TAGAGAACAGCAGTTAATCAGTTTAAAAAACATTCATTCTGTATTGGAACGCAATGAAATGGAAGCCTGGCAAAAGCTGA TACGCGTGCTGACTCATGAAATCATGAACTCTATCACACCAATCATTTCTCTTTCGGAAACATTAAGCGAGAGAGGAATC CCCAGTCAACTGGGAGAAAAAGAATATTCTGTTATGCTGCAAGCCATGCAGACCATTCACAGAAGAAGCAAAGGATTACT GGAATTTGTAGAGAACTATCGTCGGCTCACACGAATCCCTGCTCCTATTCGTACACAAATTTCTATTGCGGAATTATTCA CGGATTTAAAGAAATTATTTCCGGAAGAAGAGTTTCAGTTTGAGGTTCCCTCACCCGAACTGAAATTAAATGTGGACCGA ACACAAATAGAACAGATTCTTATTAATCTGCTGAAAAATGCCCGTGAAGCATGCAGTCGAAAATCAGATAAGAAGATTCA GGTAAAAGCAAGAAAACTTTCTGCCGGAAATACGACATTAACGATATCTGATAATGGAGAAGGTATTCTGCCCGATGTGC TGGATAAAATATTTGTTCCTTTCTTTACCACCAAAACATCCGGTTCGGGTATCGGATTAAGTTTATGCAAGCAAATCATG ACTTTGCATGAAGGAAGTATTAATGTTAAGTCGGAAGTGGGTAAAGGAAGCAGTTTTATCCTTACTTTTCCTAAATAA
Upstream 100 bases:
>100_bases AAAAAGCAATGAAACTTAGTGAAGGGAATATCTCACGTGCTGCTGACTATTTAGGTATTACCCGCTTTGCCTTATATCGC AAACTTGAAAAACTAGGCTT
Downstream 100 bases:
>100_bases GAGCCTTTGATATTTGCATCTTGATGTGCTATTCTTAAGATTACGTCGAAAAATTATTGTACCAAAAGCAACAAACCAGA AAATAAACTGCATAAATAAA
Product: two-component system sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MKRFAFRVILHILLIVLFSIGSYLLFQKQLWFSTTICLILLITIGIHLYRMQFKQIALLRRLTDGLRYNDMMQTFHPPFN NKIMNEWAEELSDTLKDFRGRLLAEEIKHQYYENLLNKVDTAVLVADKAGHIEWMNQAAVTHLGQISQLPETLLKASVAH DTPVIRIEQNSTVLEMAISRTTFATQGREQQLISLKNIHSVLERNEMEAWQKLIRVLTHEIMNSITPIISLSETLSERGI PSQLGEKEYSVMLQAMQTIHRRSKGLLEFVENYRRLTRIPAPIRTQISIAELFTDLKKLFPEEEFQFEVPSPELKLNVDR TQIEQILINLLKNAREACSRKSDKKIQVKARKLSAGNTTLTISDNGEGILPDVLDKIFVPFFTTKTSGSGIGLSLCKQIM TLHEGSINVKSEVGKGSSFILTFPK
Sequences:
>Translated_425_residues MKRFAFRVILHILLIVLFSIGSYLLFQKQLWFSTTICLILLITIGIHLYRMQFKQIALLRRLTDGLRYNDMMQTFHPPFN NKIMNEWAEELSDTLKDFRGRLLAEEIKHQYYENLLNKVDTAVLVADKAGHIEWMNQAAVTHLGQISQLPETLLKASVAH DTPVIRIEQNSTVLEMAISRTTFATQGREQQLISLKNIHSVLERNEMEAWQKLIRVLTHEIMNSITPIISLSETLSERGI PSQLGEKEYSVMLQAMQTIHRRSKGLLEFVENYRRLTRIPAPIRTQISIAELFTDLKKLFPEEEFQFEVPSPELKLNVDR TQIEQILINLLKNAREACSRKSDKKIQVKARKLSAGNTTLTISDNGEGILPDVLDKIFVPFFTTKTSGSGIGLSLCKQIM TLHEGSINVKSEVGKGSSFILTFPK >Mature_425_residues MKRFAFRVILHILLIVLFSIGSYLLFQKQLWFSTTICLILLITIGIHLYRMQFKQIALLRRLTDGLRYNDMMQTFHPPFN NKIMNEWAEELSDTLKDFRGRLLAEEIKHQYYENLLNKVDTAVLVADKAGHIEWMNQAAVTHLGQISQLPETLLKASVAH DTPVIRIEQNSTVLEMAISRTTFATQGREQQLISLKNIHSVLERNEMEAWQKLIRVLTHEIMNSITPIISLSETLSERGI PSQLGEKEYSVMLQAMQTIHRRSKGLLEFVENYRRLTRIPAPIRTQISIAELFTDLKKLFPEEEFQFEVPSPELKLNVDR TQIEQILINLLKNAREACSRKSDKKIQVKARKLSAGNTTLTISDNGEGILPDVLDKIFVPFFTTKTSGSGIGLSLCKQIM TLHEGSINVKSEVGKGSSFILTFPK
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: COG5000
COG function: function code T; Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=230, Percent_Identity=30.8695652173913, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1788549, Length=220, Percent_Identity=33.1818181818182, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1786600, Length=220, Percent_Identity=24.5454545454545, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI48994928, Length=111, Percent_Identity=36.036036036036, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 48636; Mature: 48636
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFAFRVILHILLIVLFSIGSYLLFQKQLWFSTTICLILLITIGIHLYRMQFKQIALLR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTDGLRYNDMMQTFHPPFNNKIMNEWAEELSDTLKDFRGRLLAEEIKHQYYENLLNKVD HHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAVLVADKAGHIEWMNQAAVTHLGQISQLPETLLKASVAHDTPVIRIEQNSTVLEMAISR HHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH TTFATQGREQQLISLKNIHSVLERNEMEAWQKLIRVLTHEIMNSITPIISLSETLSERGI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSQLGEKEYSVMLQAMQTIHRRSKGLLEFVENYRRLTRIPAPIRTQISIAELFTDLKKLF CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC PEEEFQFEVPSPELKLNVDRTQIEQILINLLKNAREACSRKSDKKIQVKARKLSAGNTTL CCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEE TISDNGEGILPDVLDKIFVPFFTTKTSGSGIGLSLCKQIMTLHEGSINVKSEVGKGSSFI EECCCCCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCEE LTFPK EECCC >Mature Secondary Structure MKRFAFRVILHILLIVLFSIGSYLLFQKQLWFSTTICLILLITIGIHLYRMQFKQIALLR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTDGLRYNDMMQTFHPPFNNKIMNEWAEELSDTLKDFRGRLLAEEIKHQYYENLLNKVD HHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAVLVADKAGHIEWMNQAAVTHLGQISQLPETLLKASVAHDTPVIRIEQNSTVLEMAISR HHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH TTFATQGREQQLISLKNIHSVLERNEMEAWQKLIRVLTHEIMNSITPIISLSETLSERGI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSQLGEKEYSVMLQAMQTIHRRSKGLLEFVENYRRLTRIPAPIRTQISIAELFTDLKKLF CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC PEEEFQFEVPSPELKLNVDRTQIEQILINLLKNAREACSRKSDKKIQVKARKLSAGNTTL CCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEE TISDNGEGILPDVLDKIFVPFFTTKTSGSGIGLSLCKQIMTLHEGSINVKSEVGKGSSFI EECCCCCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCEE LTFPK EECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]