| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346263
Identifier: 29346263
GI number: 29346263
Start: 1041653
End: 1042408
Strand: Reverse
Name: 29346263
Synonym: BT_0853
Alternate gene names: NA
Gene position: 1042408-1041653 (Counterclockwise)
Preceding gene: 29346265
Following gene: 29346258
Centisome position: 16.65
GC content: 40.21
Gene sequence:
>756_bases ATGAACCTCATTGAAGTTATGAAAGAAAATAAATATGACGACGACCGCTTCTTCAGCCAATATGCTCAAATGTCACGCTC TGTAGAGGGATTACAAGGTGCCGGAGAATGGCATATATTACAGAAAATGCTACCGGACTTTACAGACAAGAGAGTACTGG ACTTAGGCTGCGGATTTGGCTGGCACTGTATCTATGCCATCGAACATGGAGCAAAGTGTGTTACAGGAATTGATATTTCC GGGAAGATGCTGGAAGAAGCTCAAAAAAGAAATTCTTCACCACTCATCGAATATAAATGTATGGCAATCGAGGATTTCGA CTTTCAACCGGATACTTATGATATCGTAATCAGTTCCTTGACCTTTCATTATCTGGAATCTTTTATTAATATATGCCGTA AAGTCAACAGCTGCCTCACAGCAGGAGGTTCTTTTGTTTTTTCAGTAGAGCATCCGATATTCACAGCCTATGGTAATCAG GATTGGTATTACGACCAAGATGGAAAACGTGCTCACTGGCCTGTAGACCGCTACTTCAGTGAAGGCAAACGTACTGCTAT TTTTTTAGGAGAAGAAGTCGTGAAGTATCATAAGACTTTAACTACATATATTAATAGTCTTCTTCAGACCGGATTTGAAA TTTGTGAATTGATAGAGCCCCAACCGAGTGAAATGATGCTGGATACTATTCCGGAAATGCAAGACGAACTTCGGCGTCCA ATGATGCTTCTTATTTCTGCCAAGAAAAAAAGTTGA
Upstream 100 bases:
>100_bases TGAAAACAGAAAACAGCAAAAGATGGTTCATCCTATCTGATTTTATTTTCAGTTAATTCGTCCCAATAATCGCATAAATG CATATATTTGCCCATCTAAT
Downstream 100 bases:
>100_bases CTTGCAAACAGATGAATTTCAGTCGATTGTAATTTAATCAATAAAAAACATTCATTTAGTTATTGATAATTAAAAAATAC TCCCTATCTTTGCACCGCTT
Product: putative methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNLIEVMKENKYDDDRFFSQYAQMSRSVEGLQGAGEWHILQKMLPDFTDKRVLDLGCGFGWHCIYAIEHGAKCVTGIDIS GKMLEEAQKRNSSPLIEYKCMAIEDFDFQPDTYDIVISSLTFHYLESFINICRKVNSCLTAGGSFVFSVEHPIFTAYGNQ DWYYDQDGKRAHWPVDRYFSEGKRTAIFLGEEVVKYHKTLTTYINSLLQTGFEICELIEPQPSEMMLDTIPEMQDELRRP MMLLISAKKKS
Sequences:
>Translated_251_residues MNLIEVMKENKYDDDRFFSQYAQMSRSVEGLQGAGEWHILQKMLPDFTDKRVLDLGCGFGWHCIYAIEHGAKCVTGIDIS GKMLEEAQKRNSSPLIEYKCMAIEDFDFQPDTYDIVISSLTFHYLESFINICRKVNSCLTAGGSFVFSVEHPIFTAYGNQ DWYYDQDGKRAHWPVDRYFSEGKRTAIFLGEEVVKYHKTLTTYINSLLQTGFEICELIEPQPSEMMLDTIPEMQDELRRP MMLLISAKKKS >Mature_251_residues MNLIEVMKENKYDDDRFFSQYAQMSRSVEGLQGAGEWHILQKMLPDFTDKRVLDLGCGFGWHCIYAIEHGAKCVTGIDIS GKMLEEAQKRNSSPLIEYKCMAIEDFDFQPDTYDIVISSLTFHYLESFINICRKVNSCLTAGGSFVFSVEHPIFTAYGNQ DWYYDQDGKRAHWPVDRYFSEGKRTAIFLGEEVVKYHKTLTTYINSLLQTGFEICELIEPQPSEMMLDTIPEMQDELRRP MMLLISAKKKS
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 29033; Mature: 29033
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIEVMKENKYDDDRFFSQYAQMSRSVEGLQGAGEWHILQKMLPDFTDKRVLDLGCGFG CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHCCCCC WHCIYAIEHGAKCVTGIDISGKMLEEAQKRNSSPLIEYKCMAIEDFDFQPDTYDIVISSL HHEEEEECCCCEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHH TFHYLESFINICRKVNSCLTAGGSFVFSVEHPIFTAYGNQDWYYDQDGKRAHWPVDRYFS HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCEECCCCCCCCCCHHHHHH EGKRTAIFLGEEVVKYHKTLTTYINSLLQTGFEICELIEPQPSEMMLDTIPEMQDELRRP CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCH MMLLISAKKKS HEEEHCCCCCC >Mature Secondary Structure MNLIEVMKENKYDDDRFFSQYAQMSRSVEGLQGAGEWHILQKMLPDFTDKRVLDLGCGFG CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHCCCCC WHCIYAIEHGAKCVTGIDISGKMLEEAQKRNSSPLIEYKCMAIEDFDFQPDTYDIVISSL HHEEEEECCCCEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHH TFHYLESFINICRKVNSCLTAGGSFVFSVEHPIFTAYGNQDWYYDQDGKRAHWPVDRYFS HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCEECCCCCCCCCCHHHHHH EGKRTAIFLGEEVVKYHKTLTTYINSLLQTGFEICELIEPQPSEMMLDTIPEMQDELRRP CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCH MMLLISAKKKS HEEEHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]