| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is cutF [C]
Identifier: 29346227
GI number: 29346227
Start: 1009071
End: 1009505
Strand: Reverse
Name: cutF [C]
Synonym: BT_0817
Alternate gene names: 29346227
Gene position: 1009505-1009071 (Counterclockwise)
Preceding gene: 29346228
Following gene: 29346226
Centisome position: 16.13
GC content: 39.08
Gene sequence:
>435_bases ATGAAAAAAGTTATCATTCTGGCATGTTCCTGCTTTCTTCTGGCAGCATGCGGAAACAGTGCGAAAACAAACAATAGTAC AAGTGCGGACAGTACAGCAACCCAAGTGGCTGATATACATAATGCCGAAACATCGCTTGATTATGAAGGGACCTATAAAG GTGTCTTTCCTGCTGCCGACTGTCCGGGCATTGAAACAACTCTGACATTAAATCCTGACAAGACGTTTACTCTTCACTCT GTATACATCGACCGGGACAGTTCATTTGATGAAAAAGGAACTTATACACTGGAAGGTAATATCCTGACTTTAAAAGAAGA AGGTGGAGAAATATCTTATTATAAAGTAGAAGAAAACAAAGTTCGTCTGTTAAACGATGACAAACAAGAAATAACGGGAG CACTTGCCGAACATTATATTCTAAACAAAGAATAG
Upstream 100 bases:
>100_bases AATTAAGTTGTTCGGTTCTTTTTATTGCCCGGATTCAACTTATTATTTATACCTTTACGAACTATAAACTTAATTAGATA AACTATTAAAAGTAACGATC
Downstream 100 bases:
>100_bases ACAAGAAAATCCTGTCCTTATCAAAAGATACCGGAAACAAAGCGGCTGATCAGTCATTTTATTTCCGGTATCTTTTTTTG TTTCTATGTTTTATCGTTTT
Product: lipoprotein, function unknown
Products: NA
Alternate protein names: Copper Resistance Lipoprotein NlpE; Lipoprotein NlpE Involved In Copper Resistance
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKKVIILACSCFLLAACGNSAKTNNSTSADSTATQVADIHNAETSLDYEGTYKGVFPAADCPGIETTLTLNPDKTFTLHS VYIDRDSSFDEKGTYTLEGNILTLKEEGGEISYYKVEENKVRLLNDDKQEITGALAEHYILNKE
Sequences:
>Translated_144_residues MKKVIILACSCFLLAACGNSAKTNNSTSADSTATQVADIHNAETSLDYEGTYKGVFPAADCPGIETTLTLNPDKTFTLHS VYIDRDSSFDEKGTYTLEGNILTLKEEGGEISYYKVEENKVRLLNDDKQEITGALAEHYILNKE >Mature_144_residues MKKVIILACSCFLLAACGNSAKTNNSTSADSTATQVADIHNAETSLDYEGTYKGVFPAADCPGIETTLTLNPDKTFTLHS VYIDRDSSFDEKGTYTLEGNILTLKEEGGEISYYKVEENKVRLLNDDKQEITGALAEHYILNKE
Specific function: Involved In Copper Homeostasis. Could Be Involved In Both Copper Efflux And The Delivery Of Copper To Copper-Dependent Enzymes. [C]
COG id: COG3015
COG function: function code MP; Uncharacterized lipoprotein NlpE involved in copper resistance
Gene ontology:
Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786390, Length=137, Percent_Identity=31.3868613138686, Blast_Score=66, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15782; Mature: 15782
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVIILACSCFLLAACGNSAKTNNSTSADSTATQVADIHNAETSLDYEGTYKGVFPAAD CCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC CPGIETTLTLNPDKTFTLHSVYIDRDSSFDEKGTYTLEGNILTLKEEGGEISYYKVEENK CCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCEEECCCEEEEECCCCEEEEEEECCCE VRLLNDDKQEITGALAEHYILNKE EEEECCCHHHHHHHHHHHEEECCC >Mature Secondary Structure MKKVIILACSCFLLAACGNSAKTNNSTSADSTATQVADIHNAETSLDYEGTYKGVFPAAD CCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC CPGIETTLTLNPDKTFTLHSVYIDRDSSFDEKGTYTLEGNILTLKEEGGEISYYKVEENK CCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCEEECCCEEEEECCCCEEEEEEECCCE VRLLNDDKQEITGALAEHYILNKE EEEECCCHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA