| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346191
Identifier: 29346191
GI number: 29346191
Start: 971723
End: 972445
Strand: Reverse
Name: 29346191
Synonym: BT_0781
Alternate gene names: NA
Gene position: 972445-971723 (Counterclockwise)
Preceding gene: 29346193
Following gene: 29346190
Centisome position: 15.53
GC content: 42.88
Gene sequence:
>723_bases ATGGAAATAAAAAAATTCATCGAAAACTATCGGGAAGCTTTTGGCGAATATGCTGAATTGCCTATCGTATTCTGGTACTC GGACATTCTTGAAAATGAAACCGGGAAAGTGAACGGATGCTTCTTTAAAAGCATGAGTAAAGTCAGGGGAGGTAATACCA TCAGTCTGAATGCGGAAACAATTGGTTGCGGCGGTGGTAAGTTTTATACCGGATTCACCGATATGCCCGAGCACGTGCCG ACGTTCGTATCTCTAAAGGAACGATATAAGCAGACGCCGGAAATGGTAAAAAGCTTTATTGAGCAACTAGGAGTACCAAG GGCAGAAAAGGAATATCTGCATTTTGCCCGTATAGATAAAGTGGAAACGTTCGATCATTTGGAAGGAATCCTTTTTTTGG CCAATCCCGATATATTATCCGGACTGACCACCTGGGCTTTCTTCGATAATAATAAGGAGGATACAGTGATTTCCACTTTC GGGTCGGGATGCAGTTCTGTGGTCACACAGACGATTCTGGAGAATCGTAAAGGCGGATACAGAACATTCATCGGCTTCTT TGATCCATCTGTACGCCCTTATTTTGAGGCTGATATACTGAGTTATACCATTCCGATGTCGAGATTTAAGGTGATGTATG AGACTATGCGCAGCAGTTGCCTGTTTGACACACACGCATGGGGAAAGATTCGGGAAAGAAACCATAATAGCTACAAAGAA TAA
Upstream 100 bases:
>100_bases AGTGCTCCATCGCTCCGTATACCAAACGTATATTTTCGGACTTTATTCTTTGCTCCTTACTTTTTTATTTTAACTTTGTA CGTAGATAAAATACCTAATT
Downstream 100 bases:
>100_bases GAATATGGATTTTATACTTCGTCCATGGAAAGTATCTGATGCCAAAGCCTTAGCAAGGCATCTGAATAATAAGAAGATAT GGGATAACTGTCGTGACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MEIKKFIENYREAFGEYAELPIVFWYSDILENETGKVNGCFFKSMSKVRGGNTISLNAETIGCGGGKFYTGFTDMPEHVP TFVSLKERYKQTPEMVKSFIEQLGVPRAEKEYLHFARIDKVETFDHLEGILFLANPDILSGLTTWAFFDNNKEDTVISTF GSGCSSVVTQTILENRKGGYRTFIGFFDPSVRPYFEADILSYTIPMSRFKVMYETMRSSCLFDTHAWGKIRERNHNSYKE
Sequences:
>Translated_240_residues MEIKKFIENYREAFGEYAELPIVFWYSDILENETGKVNGCFFKSMSKVRGGNTISLNAETIGCGGGKFYTGFTDMPEHVP TFVSLKERYKQTPEMVKSFIEQLGVPRAEKEYLHFARIDKVETFDHLEGILFLANPDILSGLTTWAFFDNNKEDTVISTF GSGCSSVVTQTILENRKGGYRTFIGFFDPSVRPYFEADILSYTIPMSRFKVMYETMRSSCLFDTHAWGKIRERNHNSYKE >Mature_240_residues MEIKKFIENYREAFGEYAELPIVFWYSDILENETGKVNGCFFKSMSKVRGGNTISLNAETIGCGGGKFYTGFTDMPEHVP TFVSLKERYKQTPEMVKSFIEQLGVPRAEKEYLHFARIDKVETFDHLEGILFLANPDILSGLTTWAFFDNNKEDTVISTF GSGCSSVVTQTILENRKGGYRTFIGFFDPSVRPYFEADILSYTIPMSRFKVMYETMRSSCLFDTHAWGKIRERNHNSYKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27617; Mature: 27617
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKKFIENYREAFGEYAELPIVFWYSDILENETGKVNGCFFKSMSKVRGGNTISLNAET CCHHHHHHHHHHHHHHHHCCCHHEEEHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCE IGCGGGKFYTGFTDMPEHVPTFVSLKERYKQTPEMVKSFIEQLGVPRAEKEYLHFARIDK EECCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH VETFDHLEGILFLANPDILSGLTTWAFFDNNKEDTVISTFGSGCSSVVTQTILENRKGGY HHHHHHHCCEEEEECCHHHHHHHHHEEECCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCC RTFIGFFDPSVRPYFEADILSYTIPMSRFKVMYETMRSSCLFDTHAWGKIRERNHNSYKE EEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure MEIKKFIENYREAFGEYAELPIVFWYSDILENETGKVNGCFFKSMSKVRGGNTISLNAET CCHHHHHHHHHHHHHHHHCCCHHEEEHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCE IGCGGGKFYTGFTDMPEHVPTFVSLKERYKQTPEMVKSFIEQLGVPRAEKEYLHFARIDK EECCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH VETFDHLEGILFLANPDILSGLTTWAFFDNNKEDTVISTFGSGCSSVVTQTILENRKGGY HHHHHHHCCEEEEECCHHHHHHHHHEEECCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCC RTFIGFFDPSVRPYFEADILSYTIPMSRFKVMYETMRSSCLFDTHAWGKIRERNHNSYKE EEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA