| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346069
Identifier: 29346069
GI number: 29346069
Start: 811729
End: 812766
Strand: Reverse
Name: 29346069
Synonym: BT_0659
Alternate gene names: NA
Gene position: 812766-811729 (Counterclockwise)
Preceding gene: 29346070
Following gene: 29346066
Centisome position: 12.98
GC content: 39.88
Gene sequence:
>1038_bases ATGAAATCTAAAAACATCATTCTATTGTTTACTTTGGCATTGCCATTGTTCAGTTGTAGTGAATCACAAAAAAGAGTATC CTTTAGCGAAAGCACAACTGCTAAATCTACCGCTTTGAAGGAAACCTTTATCTCCATTCCAATGGATATAAAAAAGAAAG GAGATATCTTATATGCCGGTGATTTTAAAGGAGACAGCCTTTTATACTGCTATAGTCTTAGTGAACAACGCTTTGTAAAT CAAATGCTGCCACAAGGACAAGGACCTGATGAATTTTTAAGCCCTGTCGAATTCTTTCTGTCTGATTCGTCTGCCTTCAT ACACAATCGATGGCACTTCACAGCGCAAAACTATATATTCAACACGAAAGACTTTTCCATCCAGCGACAAGGAGAGTTGA TACACCTGCCCATGAGCATTGACAGAGTCTATCCGATAAGCGAATCACGCTTTATAGCGTCCGGTGTTTTTGAAGATTGC AGATTCCTTATTTTAGATAATGACGGCAATGTTATATCCAAATGCGGCGACTTCCCGAACTATCAAAGTGGAGAAGAAAA CATACCCAATACGGCTAAAGGTATGTTTCATCAATCACAATTCGGTTACAACACCGACCGGAAACGTCTGGCATGTGCTA CCAATAATGTACTTGAGCTATGGGACTATAAGCCGGAAACATTAACGCTCCATAAAAGACTATTGTTAGCACCCTATCAT TATCAGTTCAATTCAAGCCCAGACGGTGTGTATGCGGAAAGTGATAATCCTGATGCCGAACTGGGAGCACGAGGCATTGC CGTTTCCAATAACTATGTTTATGTACTGTATAACCCAAACACCAATCGGATGCACGAAGAACAAAAAGAAACTCTAAACA GCGAGATTTGGGTTTTCGACTGGGAAGGAAAACCGATACGTAAAATTTTGCCAGATACTCATATAGAATGCTTCTGTGTA GATGAAACCGATACTTCATTTTATTGTGTAATGACTGCACCGGACTATTGTATTGGGATAGTGTCACCATCCCATTAA
Upstream 100 bases:
>100_bases CTCACTATAAATATTTTAGCCCTATTTCTCTTCAATATCCTTGTTTTTCAAAACACATACGTTATCTTTGTAGTTATAGT ACAAAATAAAGCAAAACAAA
Downstream 100 bases:
>100_bases CATAGTGACAGTATGTGCCAAGGATAGTGTCACTATCCCGAGCACATACTGTCACTATAACAAATCGAATATTTTGAGCT ATTCTTGTCCTAGTCCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKSKNIILLFTLALPLFSCSESQKRVSFSESTTAKSTALKETFISIPMDIKKKGDILYAGDFKGDSLLYCYSLSEQRFVN QMLPQGQGPDEFLSPVEFFLSDSSAFIHNRWHFTAQNYIFNTKDFSIQRQGELIHLPMSIDRVYPISESRFIASGVFEDC RFLILDNDGNVISKCGDFPNYQSGEENIPNTAKGMFHQSQFGYNTDRKRLACATNNVLELWDYKPETLTLHKRLLLAPYH YQFNSSPDGVYAESDNPDAELGARGIAVSNNYVYVLYNPNTNRMHEEQKETLNSEIWVFDWEGKPIRKILPDTHIECFCV DETDTSFYCVMTAPDYCIGIVSPSH
Sequences:
>Translated_345_residues MKSKNIILLFTLALPLFSCSESQKRVSFSESTTAKSTALKETFISIPMDIKKKGDILYAGDFKGDSLLYCYSLSEQRFVN QMLPQGQGPDEFLSPVEFFLSDSSAFIHNRWHFTAQNYIFNTKDFSIQRQGELIHLPMSIDRVYPISESRFIASGVFEDC RFLILDNDGNVISKCGDFPNYQSGEENIPNTAKGMFHQSQFGYNTDRKRLACATNNVLELWDYKPETLTLHKRLLLAPYH YQFNSSPDGVYAESDNPDAELGARGIAVSNNYVYVLYNPNTNRMHEEQKETLNSEIWVFDWEGKPIRKILPDTHIECFCV DETDTSFYCVMTAPDYCIGIVSPSH >Mature_345_residues MKSKNIILLFTLALPLFSCSESQKRVSFSESTTAKSTALKETFISIPMDIKKKGDILYAGDFKGDSLLYCYSLSEQRFVN QMLPQGQGPDEFLSPVEFFLSDSSAFIHNRWHFTAQNYIFNTKDFSIQRQGELIHLPMSIDRVYPISESRFIASGVFEDC RFLILDNDGNVISKCGDFPNYQSGEENIPNTAKGMFHQSQFGYNTDRKRLACATNNVLELWDYKPETLTLHKRLLLAPYH YQFNSSPDGVYAESDNPDAELGARGIAVSNNYVYVLYNPNTNRMHEEQKETLNSEIWVFDWEGKPIRKILPDTHIECFCV DETDTSFYCVMTAPDYCIGIVSPSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39445; Mature: 39445
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKNIILLFTLALPLFSCSESQKRVSFSESTTAKSTALKETFISIPMDIKKKGDILYAG CCCCCEEEEEEHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE DFKGDSLLYCYSLSEQRFVNQMLPQGQGPDEFLSPVEFFLSDSSAFIHNRWHFTAQNYIF CCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEE NTKDFSIQRQGELIHLPMSIDRVYPISESRFIASGVFEDCRFLILDNDGNVISKCGDFPN ECCCCEEEECCCEEEECCCCCEEECCCCCCEEHHCCCCCCEEEEEECCCCHHHHCCCCCC YQSGEENIPNTAKGMFHQSQFGYNTDRKRLACATNNVLELWDYKPETLTLHKRLLLAPYH CCCCCCCCCCHHHHCEEHHHCCCCCCCCEEEEECCCEEEEECCCCCEEEEEHHEEEEEEE YQFNSSPDGVYAESDNPDAELGARGIAVSNNYVYVLYNPNTNRMHEEQKETLNSEIWVFD EEECCCCCCEEECCCCCCHHHCCCEEEEECCEEEEEECCCCCCHHHHHHHHCCCEEEEEE WEGKPIRKILPDTHIECFCVDETDTSFYCVMTAPDYCIGIVSPSH CCCCCHHHHCCCCCEEEEEEECCCCEEEEEEECCCEEEEEECCCC >Mature Secondary Structure MKSKNIILLFTLALPLFSCSESQKRVSFSESTTAKSTALKETFISIPMDIKKKGDILYAG CCCCCEEEEEEHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE DFKGDSLLYCYSLSEQRFVNQMLPQGQGPDEFLSPVEFFLSDSSAFIHNRWHFTAQNYIF CCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEE NTKDFSIQRQGELIHLPMSIDRVYPISESRFIASGVFEDCRFLILDNDGNVISKCGDFPN ECCCCEEEECCCEEEECCCCCEEECCCCCCEEHHCCCCCCEEEEEECCCCHHHHCCCCCC YQSGEENIPNTAKGMFHQSQFGYNTDRKRLACATNNVLELWDYKPETLTLHKRLLLAPYH CCCCCCCCCCHHHHCEEHHHCCCCCCCCEEEEECCCEEEEECCCCCEEEEEHHEEEEEEE YQFNSSPDGVYAESDNPDAELGARGIAVSNNYVYVLYNPNTNRMHEEQKETLNSEIWVFD EEECCCCCCEEECCCCCCHHHCCCEEEEECCEEEEEECCCCCCHHHHHHHHCCCEEEEEE WEGKPIRKILPDTHIECFCVDETDTSFYCVMTAPDYCIGIVSPSH CCCCCHHHHCCCCCEEEEEEECCCCEEEEEEECCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA