| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29345902
Identifier: 29345902
GI number: 29345902
Start: 607405
End: 608022
Strand: Reverse
Name: 29345902
Synonym: BT_0492
Alternate gene names: NA
Gene position: 608022-607405 (Counterclockwise)
Preceding gene: 29345903
Following gene: 29345901
Centisome position: 9.71
GC content: 46.28
Gene sequence:
>618_bases ATGAACTTTATATCAGATATTTTATACTGGATTTCAACAGGCTTGCTCGTTCCTGTCATCGTTTTATTAATCATCCTCTT TTGCCGCGCGATTTTACTTGCCGGTAGTTTCTATGGTCAATATCTGTCCATTCGTAAAACGGAAACCCTGCTCCGCAACG AGCTGAGCAAGCTGACTCCGGACACAGTAGAAGAACTGAGTTCCAAACTTCCGGAAAATTCTAGATCACTTGTCATTACC TATATGCGTCAGGTATTGGACGCCCGTGATACTCCGGCACAGGTACAACGTTTATTGGCTAATTTTGAAATCGCAGCGGA CAAAGACTTAGCCATCTCCAAGACCCTGACCAAACTGGGACCGATCTTAGGTCTGATGGGAACATTAATTCCAATGGGAC CCGCCCTCGCAGGACTGGCCAGCGGAGATATTGCTTCCATGGCTTACAATATGCAGATCGCTTTCGCCACCACTGTAGTC GGACTGGTAGCCGGTGCCGTAGGCTTCCTTACACAGCAAGTGAAACAACGCTGGTACCTGCAGGATATGACCAACCTTGA ATTCATATCCGAATTGCTCAATGACAAACGTTCCATCCATAAAACCTCAGAGAAATGA
Upstream 100 bases:
>100_bases CGGAATTCTCGGACTTCTCTGGTGGAACATCCGAAACAGAAACAAAGAAAAAAGTGTGAAACAATAATAGAATAAATAAC TCTTCAAATTATCAATAACA
Downstream 100 bases:
>100_bases AACATAACCTATTGCGAAAAGAGGAAGACTCCGACCCGATCAGCGTAGTATCCAATCTGTTCGACATTGCGATGGTTTTT GCCGTTGCATTGATGGTAGC
Product: integral membrane protein
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel Family Protein; MotA/lQ/ExbB Proton Channel Family Domain Protein; Integral Membrane Protein; Transport-Related Membrane Protein
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MNFISDILYWISTGLLVPVIVLLIILFCRAILLAGSFYGQYLSIRKTETLLRNELSKLTPDTVEELSSKLPENSRSLVIT YMRQVLDARDTPAQVQRLLANFEIAADKDLAISKTLTKLGPILGLMGTLIPMGPALAGLASGDIASMAYNMQIAFATTVV GLVAGAVGFLTQQVKQRWYLQDMTNLEFISELLNDKRSIHKTSEK
Sequences:
>Translated_205_residues MNFISDILYWISTGLLVPVIVLLIILFCRAILLAGSFYGQYLSIRKTETLLRNELSKLTPDTVEELSSKLPENSRSLVIT YMRQVLDARDTPAQVQRLLANFEIAADKDLAISKTLTKLGPILGLMGTLIPMGPALAGLASGDIASMAYNMQIAFATTVV GLVAGAVGFLTQQVKQRWYLQDMTNLEFISELLNDKRSIHKTSEK >Mature_205_residues MNFISDILYWISTGLLVPVIVLLIILFCRAILLAGSFYGQYLSIRKTETLLRNELSKLTPDTVEELSSKLPENSRSLVIT YMRQVLDARDTPAQVQRLLANFEIAADKDLAISKTLTKLGPILGLMGTLIPMGPALAGLASGDIASMAYNMQIAFATTVV GLVAGAVGFLTQQVKQRWYLQDMTNLEFISELLNDKRSIHKTSEK
Specific function: Unknown
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22639; Mature: 22639
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFISDILYWISTGLLVPVIVLLIILFCRAILLAGSFYGQYLSIRKTETLLRNELSKLTP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DTVEELSSKLPENSRSLVITYMRQVLDARDTPAQVQRLLANFEIAADKDLAISKTLTKLG HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH PILGLMGTLIPMGPALAGLASGDIASMAYNMQIAFATTVVGLVAGAVGFLTQQVKQRWYL HHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDMTNLEFISELLNDKRSIHKTSEK HHCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNFISDILYWISTGLLVPVIVLLIILFCRAILLAGSFYGQYLSIRKTETLLRNELSKLTP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DTVEELSSKLPENSRSLVITYMRQVLDARDTPAQVQRLLANFEIAADKDLAISKTLTKLG HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH PILGLMGTLIPMGPALAGLASGDIASMAYNMQIAFATTVVGLVAGAVGFLTQQVKQRWYL HHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDMTNLEFISELLNDKRSIHKTSEK HHCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA