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The map label for this gene is 29345842

Identifier: 29345842

GI number: 29345842

Start: 519272

End: 520150

Strand: Reverse

Name: 29345842

Synonym: BT_0432

Alternate gene names: NA

Gene position: 520150-519272 (Counterclockwise)

Preceding gene: 29345843

Following gene: 29345841

Centisome position: 8.31

GC content: 44.94

Gene sequence:

>879_bases
ATGAAACGAGGTAAGAGCAGGAGATTATTTAAGAAAAAGAAGTCACATTCCAATCAAAGATTAGGGTGTATCATCGCTAT
CATCGTACTTATTCCCATTTGTTACGGGCTTTATCTGTATTATCAGCAATACAGTGTCCAGCACAGTAGCAAACCGCAGA
TAGAGACTTCCGTTTCCCTCCCCACTCCATCCGGCAAAGATTTAGAGATTCCCATTTCATTGATTCCCCGTCAGGAGCAG
ATCATTCGTCATAAAGGTTATACGGTTTCCTACAATAAAGATCTGAAGATTCCGAATTGGGTTTCTTACGAGCTGACCCG
TCAAGAAACCAAAGGAAAAGAAAAGAGAGGTGACAACTTCATCGCCGATCCTTTAGTAAAAGGCGCCATTGCGACCAATG
CGGATTATGCACGTTCAGGATATGACAAAGGACATATGGCACCAGCCGCCGACATGAAATGGAGTCCGGATGTCATGAAA
GAATCCTTCTATTTCAGCAATATGTGTCCGCAGCATCCTCAACTGAACAGAAGAGGCTGGAAAAATCTGGAAGAAAAAAT
AAGAGACTGGGCGGTAGCCGATAGTGCCATCATCATCATATGCGGTCCTATCATCGACAAGCCGTCCAAGACCATCGGAA
AAAATAAGGTGGCAGTGCCCGAACGATTCTTCAAAGTAATCCTCTCTCCTTTTGTCAAACCGGCTCGTGGCATCGGGTTC
TTATTCAACAACAGACAGGCGGTAGAGCCCCTTTCCACCTATGCGGTATCAATTGACAGCATCGAGAAACTTACCCATAT
GGACTTCTTCTCTCCCCTGCCCGATGAATTAGAAAATGCAGTAGAAGCCAATGCCGATTATTACCAGTGGCCACGCTAA

Upstream 100 bases:

>100_bases
GCGTAGGTCGCCAGTTCAAGTCTGGCTAGCGGCTCTTGACAATAAAGCGCTAACTACAGAATAGTTAGCGCTTTTCTTAT
TAACCCCCAAAGCAAATCGC

Downstream 100 bases:

>100_bases
TAGTTGACAAAATCAGCCGAATTTCAACTATTCACCGTTGAAAGGAATCGCTCCTATCCAAAATCTTCCTATCTTTGACG
CAATTTTTAAAGTTACGTCA

Product: putative endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKRGKSRRLFKKKKSHSNQRLGCIIAIIVLIPICYGLYLYYQQYSVQHSSKPQIETSVSLPTPSGKDLEIPISLIPRQEQ
IIRHKGYTVSYNKDLKIPNWVSYELTRQETKGKEKRGDNFIADPLVKGAIATNADYARSGYDKGHMAPAADMKWSPDVMK
ESFYFSNMCPQHPQLNRRGWKNLEEKIRDWAVADSAIIIICGPIIDKPSKTIGKNKVAVPERFFKVILSPFVKPARGIGF
LFNNRQAVEPLSTYAVSIDSIEKLTHMDFFSPLPDELENAVEANADYYQWPR

Sequences:

>Translated_292_residues
MKRGKSRRLFKKKKSHSNQRLGCIIAIIVLIPICYGLYLYYQQYSVQHSSKPQIETSVSLPTPSGKDLEIPISLIPRQEQ
IIRHKGYTVSYNKDLKIPNWVSYELTRQETKGKEKRGDNFIADPLVKGAIATNADYARSGYDKGHMAPAADMKWSPDVMK
ESFYFSNMCPQHPQLNRRGWKNLEEKIRDWAVADSAIIIICGPIIDKPSKTIGKNKVAVPERFFKVILSPFVKPARGIGF
LFNNRQAVEPLSTYAVSIDSIEKLTHMDFFSPLPDELENAVEANADYYQWPR
>Mature_292_residues
MKRGKSRRLFKKKKSHSNQRLGCIIAIIVLIPICYGLYLYYQQYSVQHSSKPQIETSVSLPTPSGKDLEIPISLIPRQEQ
IIRHKGYTVSYNKDLKIPNWVSYELTRQETKGKEKRGDNFIADPLVKGAIATNADYARSGYDKGHMAPAADMKWSPDVMK
ESFYFSNMCPQHPQLNRRGWKNLEEKIRDWAVADSAIIIICGPIIDKPSKTIGKNKVAVPERFFKVILSPFVKPARGIGF
LFNNRQAVEPLSTYAVSIDSIEKLTHMDFFSPLPDELENAVEANADYYQWPR

Specific function: Unknown

COG id: COG1864

COG function: function code F; DNA/RNA endonuclease G, NUC1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA/RNA non-specific endonuclease family [H]

Homologues:

Organism=Homo sapiens, GI53759134, Length=213, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI224451073, Length=216, Percent_Identity=29.6296296296296, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI224451075, Length=193, Percent_Identity=31.6062176165803, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17505967, Length=222, Percent_Identity=28.3783783783784, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322253, Length=224, Percent_Identity=30.8035714285714, Blast_Score=91, Evalue=2e-19,
Organism=Drosophila melanogaster, GI20129899, Length=238, Percent_Identity=30.672268907563, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24581065, Length=224, Percent_Identity=26.7857142857143, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018524
- InterPro:   IPR001604
- InterPro:   IPR020821 [H]

Pfam domain/function: PF01223 Endonuclease_NS [H]

EC number: NA

Molecular weight: Translated: 33370; Mature: 33370

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGKSRRLFKKKKSHSNQRLGCIIAIIVLIPICYGLYLYYQQYSVQHSSKPQIETSVSL
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
PTPSGKDLEIPISLIPRQEQIIRHKGYTVSYNKDLKIPNWVSYELTRQETKGKEKRGDNF
CCCCCCCEEECCEECCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCHHHCCCCC
IADPLVKGAIATNADYARSGYDKGHMAPAADMKWSPDVMKESFYFSNMCPQHPQLNRRGW
HHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH
KNLEEKIRDWAVADSAIIIICGPIIDKPSKTIGKNKVAVPERFFKVILSPFVKPARGIGF
HHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCHHCCCEE
LFNNRQAVEPLSTYAVSIDSIEKLTHMDFFSPLPDELENAVEANADYYQWPR
EECCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKRGKSRRLFKKKKSHSNQRLGCIIAIIVLIPICYGLYLYYQQYSVQHSSKPQIETSVSL
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
PTPSGKDLEIPISLIPRQEQIIRHKGYTVSYNKDLKIPNWVSYELTRQETKGKEKRGDNF
CCCCCCCEEECCEECCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCHHHCCCCC
IADPLVKGAIATNADYARSGYDKGHMAPAADMKWSPDVMKESFYFSNMCPQHPQLNRRGW
HHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH
KNLEEKIRDWAVADSAIIIICGPIIDKPSKTIGKNKVAVPERFFKVILSPFVKPARGIGF
HHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCHHCCCEE
LFNNRQAVEPLSTYAVSIDSIEKLTHMDFFSPLPDELENAVEANADYYQWPR
EECCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]