| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is vorB [H]
Identifier: 29345741
GI number: 29345741
Start: 396996
End: 397883
Strand: Reverse
Name: vorB [H]
Synonym: BT_0331
Alternate gene names: 29345741
Gene position: 397883-396996 (Counterclockwise)
Preceding gene: 29345742
Following gene: 29345740
Centisome position: 6.36
GC content: 48.31
Gene sequence:
>888_bases ATGGTATATGGAGGCGCAGGTAGTGGAAAGATGGTATTGACCTCTTCCTCAAGTCCCGGCGTGAGTCTGAAACAGGAAGG TATCTCCTACATCGCAGGTGCCGAACTTCCTTGTCTGATTGTAAACGTAATGCGCGGCGGTCCCGGATTGGGAACCATCC AGCCGAGTCAGGCGGACTACTTCCAGACAGTGAAAGGAGGCGGTCACGGTGACTACAGACTGATTGCCCTTGCTCCGGCA TCCGTACAGGAAATGGCGGATTTCGTTGCACTCGGATTCGAACTTGCTTTCAAATACCGTAATCCGGCTATTATCCTTGC CGACGGTGTAATCGGACAGATGATGGAAAAAGTAGTTCTTCCTGCACAGAAGCCACGCCGCACCGATGCAGAAGTTATCG AACAATGTCCGTGGGCTGCTACCGGAAAAGCGAAAGGTCGTAAACCGAATATTATTACTTCACTCGAACTGAAGCCGGAA GCAATGGAAATCAACAACATCCGTTTCCAGGCTAAATACAAACAGATTGAGGAAAACGAAGTACGCTTCGAAGAAATCAA CTGCGAAGATGCAGAATATCTGATCGTAGCTTTCGGTTCCATGGCACGTATCGGTCAGAAAGCAATGGAACTCGCCCGCG AAAAAGGAATCAAAGTAGGTATTCTTCGCCCCATCACTTTGTGGCCGTTCCCGAGCAAAGCCATTGCCGCTTACGCTGAC AAAGTGAAAGGTATGCTCGTTACAGAATTGAATGCCGGACAGATGATCGAAGATGTCCGCCTGGCTGTCAATGGTAAAGT AAAAGTAGAACATTTCGGACGTCTCGGCGGTATTGTTCCCGATCCGGATGAAATTGTAACTGCTCTGGAAGAAAAAATAA TCAAATAA
Upstream 100 bases:
>100_bases CCCCAATCGGAAGTACTGGAAACGCTTGCCGAACTGAAACCGTGGGAAACAACCGGCATGGTAGTTCTTCCAGGCAGAAA GTGAAGTGGCAGCTATCAAT
Downstream 100 bases:
>100_bases CGAAACGACGATGAATCCCGATAAAATAAGAAACGTATTGAACATCCTTTTCATGATATTGGCACTTGCCGCTATCATTG TCTACTTTGTAGTAGGAAAG
Product: 2-oxoglutarate ferredoxin oxidoreductase
Products: NA
Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit beta; 2-oxoisovalerate oxidoreductase beta chain [H]
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MVYGGAGSGKMVLTSSSSPGVSLKQEGISYIAGAELPCLIVNVMRGGPGLGTIQPSQADYFQTVKGGGHGDYRLIALAPA SVQEMADFVALGFELAFKYRNPAIILADGVIGQMMEKVVLPAQKPRRTDAEVIEQCPWAATGKAKGRKPNIITSLELKPE AMEINNIRFQAKYKQIEENEVRFEEINCEDAEYLIVAFGSMARIGQKAMELAREKGIKVGILRPITLWPFPSKAIAAYAD KVKGMLVTELNAGQMIEDVRLAVNGKVKVEHFGRLGGIVPDPDEIVTALEEKIIK
Sequences:
>Translated_295_residues MVYGGAGSGKMVLTSSSSPGVSLKQEGISYIAGAELPCLIVNVMRGGPGLGTIQPSQADYFQTVKGGGHGDYRLIALAPA SVQEMADFVALGFELAFKYRNPAIILADGVIGQMMEKVVLPAQKPRRTDAEVIEQCPWAATGKAKGRKPNIITSLELKPE AMEINNIRFQAKYKQIEENEVRFEEINCEDAEYLIVAFGSMARIGQKAMELAREKGIKVGILRPITLWPFPSKAIAAYAD KVKGMLVTELNAGQMIEDVRLAVNGKVKVEHFGRLGGIVPDPDEIVTALEEKIIK >Mature_295_residues MVYGGAGSGKMVLTSSSSPGVSLKQEGISYIAGAELPCLIVNVMRGGPGLGTIQPSQADYFQTVKGGGHGDYRLIALAPA SVQEMADFVALGFELAFKYRNPAIILADGVIGQMMEKVVLPAQKPRRTDAEVIEQCPWAATGKAKGRKPNIITSLELKPE AMEINNIRFQAKYKQIEENEVRFEEINCEDAEYLIVAFGSMARIGQKAMELAREKGIKVGILRPITLWPFPSKAIAAYAD KVKGMLVTELNAGQMIEDVRLAVNGKVKVEHFGRLGGIVPDPDEIVTALEEKIIK
Specific function: Unknown
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N [H]
EC number: =1.2.7.7 [H]
Molecular weight: Translated: 31977; Mature: 31977
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYGGAGSGKMVLTSSSSPGVSLKQEGISYIAGAELPCLIVNVMRGGPGLGTIQPSQADY CEECCCCCCCEEEECCCCCCCEEHHHCCCEECCCCCCEEEHHHHCCCCCCCCCCCCCCHH FQTVKGGGHGDYRLIALAPASVQEMADFVALGFELAFKYRNPAIILADGVIGQMMEKVVL HHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEEECCCEEEEECCHHHHHHHHHHC PAQKPRRTDAEVIEQCPWAATGKAKGRKPNIITSLELKPEAMEINNIRFQAKYKQIEENE CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEECCEEEEEHHHHCCCCC VRFEEINCEDAEYLIVAFGSMARIGQKAMELAREKGIKVGILRPITLWPFPSKAIAAYAD CEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHH KVKGMLVTELNAGQMIEDVRLAVNGKVKVEHFGRLGGIVPDPDEIVTALEEKIIK HHCCEEEEECCCCHHHHHHHEEECCEEEEEEHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MVYGGAGSGKMVLTSSSSPGVSLKQEGISYIAGAELPCLIVNVMRGGPGLGTIQPSQADY CEECCCCCCCEEEECCCCCCCEEHHHCCCEECCCCCCEEEHHHHCCCCCCCCCCCCCCHH FQTVKGGGHGDYRLIALAPASVQEMADFVALGFELAFKYRNPAIILADGVIGQMMEKVVL HHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEEECCCEEEEECCHHHHHHHHHHC PAQKPRRTDAEVIEQCPWAATGKAKGRKPNIITSLELKPEAMEINNIRFQAKYKQIEENE CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEECCEEEEEHHHHCCCCC VRFEEINCEDAEYLIVAFGSMARIGQKAMELAREKGIKVGILRPITLWPFPSKAIAAYAD CEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHH KVKGMLVTELNAGQMIEDVRLAVNGKVKVEHFGRLGGIVPDPDEIVTALEEKIIK HHCCEEEEECCCCHHHHHHHEEECCEEEEEEHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]