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The map label for this gene is ygiQ [C]

Identifier: 29345664

GI number: 29345664

Start: 282585

End: 284447

Strand: Reverse

Name: ygiQ [C]

Synonym: BT_0254

Alternate gene names: 29345664

Gene position: 284447-282585 (Counterclockwise)

Preceding gene: 29345665

Following gene: 29345661

Centisome position: 4.54

GC content: 47.61

Gene sequence:

>1863_bases
ATGAAAGAATATCGATTGACCGATTGGTTACCTACCACCAAGAAAGAAGTGGAACTCCGCGGATGGGATGAACTGGATGT
CATTCTTTTCAGCGGTGATGCTTACGTAGACCATCCCTCATTTGGCGCTGCCGTCATCGGACGTATCCTCGAAGCGGAAG
GTTTGAAAGTTGCGATCATCCCCCAGCCCAACTGGCGTGATGACCTGCGTGACTTCAGAAAGCTGGGTCGTCCCCGATTA
TTCTTCGGCATCTCTGCCGGAAGTATGGACTCGATGGTTAACAAATACACTGCCAACAAGCGTCTGCGCAGTGAGGATGC
GTACACTCCGGACGGCCGTCCGGATATGCGTCCGGAGTATCCTTCCATCGTATACAGTCAGATTCTAAAAAGACTCTATC
CGGACGTTCCTGTTATATTAGGAAGTATTGAAGCGAGTTTGCGCCGTCTGAGTCATTATGATTACTGGCAGGATAAAGTT
CAGAAAAGTATCTTATGCGATAGTGGCGCAGACTTGCTGATCTATGGTATGGGAGAAAAGCCGATTGTAGAACTAACCCG
GAAAATGAAGGAACTGCTTCCTGCGGAGGATGCTTCATTGACAGCCGGTGAACTCAAGAAAATAGCGGGAACTATCCCTC
AGACAGCCTATCTCTGCCGTGCGACAGAGTGGACTCCTGCCGCAGACGATATTCAGCTTTACTCACATGAAGAGTGTCTG
GCTGACAAAAAGAAACAGGCCAGCAATTTCCGGCACATCGAAGAAGAATCCAATAAATATGCGGCTTCCCGTATCACACA
AGAGGTAGATAATAAAGTGGTCGTTGTCAATCCTCCTTATCCTCCGATGAGCCAGGAAGAGCTTGACCATTCGTACGATC
TGCCCTATACCCGCCTTCCCCATCCTAAATACAAAGGAAAGCGGATTCCCGCATATGATATGATAAAGTTCTCCGTCAAC
ATCCATCGGGGATGCTTCGGCGGTTGTGCATTCTGCACCATTTCCGCACATCAGGGGAAGTTTATCGTCAGCCGCAGCAA
GAAGTCTATCTTGAATGAAGTAAAGGAGGTGATGCAGTTGCCCGACTTCAAAGGGTATTTAAGTGACCTTGGAGGCCCTT
CCGCCAATATGTATCAGATGAAGGGTAAAGATGAAGCAATATGCAAAAAGTGCAAACGCCCGTCATGTATTCATCCCAAA
GTGTGCCCGAATCTTAATTCAGACCACTGCCCGTTATTGGATATATATAAAGCGGTAGATGCCATCCCCGGCATAAAAAA
ATCATTTATCGGCAGTGGAGTGCGCTACGACTTATTGCTCCATCAGAGTAAAGACGCCGCCACCAATCGCAGCACGGCTG
AATACACACGCGAGTTGATTGTCAATCATGTGAGCGGACGATTGAAAGTAGCTCCAGAGCATACCAGCGACCGGGTGTTA
TCCATCATGCGCAAACCTTCATTCGAACAGTTTGAAACTTTCAAAAAAATATTCGACCGTATCAACCGGGAAGAGAATCT
ACGTCAGCAACTTATACCGTACTTTATCTCTTCGCACCCCGGCTGCAAGGAAGAAGACATGGCGGAACTGGCTGTTATCA
CCAAGCGGCTGGACTTTCATCTGGAGCAAGTGCAGGACTTTACCCCTACTCCGATGACTGTAGCCACCGAAGCATGGTAC
AGCGGATTTCATCCCTATACACTGGAACCTGTATTCAGTGCCAAAACACAACGGGAGAAACTGGCACAACGACAATTCTT
CTTCTGGTATAAGCCGGAAGAACGAAAGAATATTCTGAATGAGTTAAGACGTATCGGCCGACAGGATCTGATAGACAAGT
TATACGGAAAGAGAAACAAATGA

Upstream 100 bases:

>100_bases
CAATGAGAAGTTTTAAAAAAACATCTTAATGATTGAAGTTAAACATCCCAATGAATAAAAAAATCATTGGGATGTTTTTT
ATTATCCGTATCTTTGCGGC

Downstream 100 bases:

>100_bases
AACCATTAAGATGGCTTCCCTATTGACTTTGCCTTTTAAATTTCGTATATTTGTAGAAACAAATCTGGAATCAAAAGCAT
GAAATGTACAAATATAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MKEYRLTDWLPTTKKEVELRGWDELDVILFSGDAYVDHPSFGAAVIGRILEAEGLKVAIIPQPNWRDDLRDFRKLGRPRL
FFGISAGSMDSMVNKYTANKRLRSEDAYTPDGRPDMRPEYPSIVYSQILKRLYPDVPVILGSIEASLRRLSHYDYWQDKV
QKSILCDSGADLLIYGMGEKPIVELTRKMKELLPAEDASLTAGELKKIAGTIPQTAYLCRATEWTPAADDIQLYSHEECL
ADKKKQASNFRHIEEESNKYAASRITQEVDNKVVVVNPPYPPMSQEELDHSYDLPYTRLPHPKYKGKRIPAYDMIKFSVN
IHRGCFGGCAFCTISAHQGKFIVSRSKKSILNEVKEVMQLPDFKGYLSDLGGPSANMYQMKGKDEAICKKCKRPSCIHPK
VCPNLNSDHCPLLDIYKAVDAIPGIKKSFIGSGVRYDLLLHQSKDAATNRSTAEYTRELIVNHVSGRLKVAPEHTSDRVL
SIMRKPSFEQFETFKKIFDRINREENLRQQLIPYFISSHPGCKEEDMAELAVITKRLDFHLEQVQDFTPTPMTVATEAWY
SGFHPYTLEPVFSAKTQREKLAQRQFFFWYKPEERKNILNELRRIGRQDLIDKLYGKRNK

Sequences:

>Translated_620_residues
MKEYRLTDWLPTTKKEVELRGWDELDVILFSGDAYVDHPSFGAAVIGRILEAEGLKVAIIPQPNWRDDLRDFRKLGRPRL
FFGISAGSMDSMVNKYTANKRLRSEDAYTPDGRPDMRPEYPSIVYSQILKRLYPDVPVILGSIEASLRRLSHYDYWQDKV
QKSILCDSGADLLIYGMGEKPIVELTRKMKELLPAEDASLTAGELKKIAGTIPQTAYLCRATEWTPAADDIQLYSHEECL
ADKKKQASNFRHIEEESNKYAASRITQEVDNKVVVVNPPYPPMSQEELDHSYDLPYTRLPHPKYKGKRIPAYDMIKFSVN
IHRGCFGGCAFCTISAHQGKFIVSRSKKSILNEVKEVMQLPDFKGYLSDLGGPSANMYQMKGKDEAICKKCKRPSCIHPK
VCPNLNSDHCPLLDIYKAVDAIPGIKKSFIGSGVRYDLLLHQSKDAATNRSTAEYTRELIVNHVSGRLKVAPEHTSDRVL
SIMRKPSFEQFETFKKIFDRINREENLRQQLIPYFISSHPGCKEEDMAELAVITKRLDFHLEQVQDFTPTPMTVATEAWY
SGFHPYTLEPVFSAKTQREKLAQRQFFFWYKPEERKNILNELRRIGRQDLIDKLYGKRNK
>Mature_620_residues
MKEYRLTDWLPTTKKEVELRGWDELDVILFSGDAYVDHPSFGAAVIGRILEAEGLKVAIIPQPNWRDDLRDFRKLGRPRL
FFGISAGSMDSMVNKYTANKRLRSEDAYTPDGRPDMRPEYPSIVYSQILKRLYPDVPVILGSIEASLRRLSHYDYWQDKV
QKSILCDSGADLLIYGMGEKPIVELTRKMKELLPAEDASLTAGELKKIAGTIPQTAYLCRATEWTPAADDIQLYSHEECL
ADKKKQASNFRHIEEESNKYAASRITQEVDNKVVVVNPPYPPMSQEELDHSYDLPYTRLPHPKYKGKRIPAYDMIKFSVN
IHRGCFGGCAFCTISAHQGKFIVSRSKKSILNEVKEVMQLPDFKGYLSDLGGPSANMYQMKGKDEAICKKCKRPSCIHPK
VCPNLNSDHCPLLDIYKAVDAIPGIKKSFIGSGVRYDLLLHQSKDAATNRSTAEYTRELIVNHVSGRLKVAPEHTSDRVL
SIMRKPSFEQFETFKKIFDRINREENLRQQLIPYFISSHPGCKEEDMAELAVITKRLDFHLEQVQDFTPTPMTVATEAWY
SGFHPYTLEPVFSAKTQREKLAQRQFFFWYKPEERKNILNELRRIGRQDLIDKLYGKRNK

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family

Homologues:

Organism=Escherichia coli, GI48994917, Length=653, Percent_Identity=40.8882082695253, Blast_Score=521, Evalue=1e-149,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y254_BACTN (Q8AB57)

Other databases:

- EMBL:   AE015928
- RefSeq:   NP_809167.1
- ProteinModelPortal:   Q8AB57
- GeneID:   1072153
- GenomeReviews:   AE015928_GR
- KEGG:   bth:BT_0254
- NMPDR:   fig|226186.1.peg.254
- HOGENOM:   HBG500854
- OMA:   FLPMSRA
- PhylomeDB:   Q8AB57
- ProtClustDB:   PRK00955
- BioCyc:   BTHE226186:BT_0254-MONOMER
- HAMAP:   MF_01251
- InterPro:   IPR002052
- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946
- SMART:   SM00729

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N

EC number: NA

Molecular weight: Translated: 71197; Mature: 71197

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS00092 N6_MTASE ; PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEYRLTDWLPTTKKEVELRGWDELDVILFSGDAYVDHPSFGAAVIGRILEAEGLKVAII
CCCCCCCCCCCCCCHHEEECCCCCEEEEEEECCCEECCCCHHHHHHHHHHHCCCCEEEEE
PQPNWRDDLRDFRKLGRPRLFFGISAGSMDSMVNKYTANKRLRSEDAYTPDGRPDMRPEY
CCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PSIVYSQILKRLYPDVPVILGSIEASLRRLSHYDYWQDKVQKSILCDSGADLLIYGMGEK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
PIVELTRKMKELLPAEDASLTAGELKKIAGTIPQTAYLCRATEWTPAADDIQLYSHEECL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHCCHHHH
ADKKKQASNFRHIEEESNKYAASRITQEVDNKVVVVNPPYPPMSQEELDHSYDLPYTRLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCCCCCCCC
HPKYKGKRIPAYDMIKFSVNIHRGCFGGCAFCTISAHQGKFIVSRSKKSILNEVKEVMQL
CCCCCCCCCCHHEEEEEEEEECCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHC
PDFKGYLSDLGGPSANMYQMKGKDEAICKKCKRPSCIHPKVCPNLNSDHCPLLDIYKAVD
CCHHHHHHHCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AIPGIKKSFIGSGVRYDLLLHQSKDAATNRSTAEYTRELIVNHVSGRLKVAPEHTSDRVL
HCCCHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHH
SIMRKPSFEQFETFKKIFDRINREENLRQQLIPYFISSHPGCKEEDMAELAVITKRLDFH
HHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LEQVQDFTPTPMTVATEAWYSGFHPYTLEPVFSAKTQREKLAQRQFFFWYKPEERKNILN
HHHHHCCCCCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCHHHHHHHH
ELRRIGRQDLIDKLYGKRNK
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKEYRLTDWLPTTKKEVELRGWDELDVILFSGDAYVDHPSFGAAVIGRILEAEGLKVAII
CCCCCCCCCCCCCCHHEEECCCCCEEEEEEECCCEECCCCHHHHHHHHHHHCCCCEEEEE
PQPNWRDDLRDFRKLGRPRLFFGISAGSMDSMVNKYTANKRLRSEDAYTPDGRPDMRPEY
CCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PSIVYSQILKRLYPDVPVILGSIEASLRRLSHYDYWQDKVQKSILCDSGADLLIYGMGEK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
PIVELTRKMKELLPAEDASLTAGELKKIAGTIPQTAYLCRATEWTPAADDIQLYSHEECL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHCCHHHH
ADKKKQASNFRHIEEESNKYAASRITQEVDNKVVVVNPPYPPMSQEELDHSYDLPYTRLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCCCCCCCC
HPKYKGKRIPAYDMIKFSVNIHRGCFGGCAFCTISAHQGKFIVSRSKKSILNEVKEVMQL
CCCCCCCCCCHHEEEEEEEEECCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHC
PDFKGYLSDLGGPSANMYQMKGKDEAICKKCKRPSCIHPKVCPNLNSDHCPLLDIYKAVD
CCHHHHHHHCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AIPGIKKSFIGSGVRYDLLLHQSKDAATNRSTAEYTRELIVNHVSGRLKVAPEHTSDRVL
HCCCHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHH
SIMRKPSFEQFETFKKIFDRINREENLRQQLIPYFISSHPGCKEEDMAELAVITKRLDFH
HHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LEQVQDFTPTPMTVATEAWYSGFHPYTLEPVFSAKTQREKLAQRQFFFWYKPEERKNILN
HHHHHCCCCCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCHHHHHHHH
ELRRIGRQDLIDKLYGKRNK
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12663928