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The map label for this gene is arnC [H]

Identifier: 29345661

GI number: 29345661

Start: 276813

End: 277556

Strand: Reverse

Name: arnC [H]

Synonym: BT_0251

Alternate gene names: 29345661

Gene position: 277556-276813 (Counterclockwise)

Preceding gene: 29345664

Following gene: 29345660

Centisome position: 4.43

GC content: 45.7

Gene sequence:

>744_bases
ATGCAATTATCAGATAGCATCGTTATTATCCCGACCTATAATGAACGGGAGAACATAGAAAATATTATCCGTGCCGTTTT
CGGCTTAGACAAAGTATTCCATATACTGGTTATAGAAGACGGATCTCCGGACGGCACTGCAAGCATTGTGAAAACTTTGC
AACAGGAATTCCCCGAACGCCTCTTTATGATCGAGCGCAAAGGGAAGCTAGGATTGGGTACTGCTTACATCGCAGGATTC
AAGTGGGCGTTGGAGCACGCATACGAATATATCTTCGAGATGGATGCCGATTTCAGCCATAACCCGAATGATCTGCCCCG
TTTGTATGCGGCTTGTGCAAAAGAAGGAGGAGACGTATCTGTCGGCTCCCGTTATGTAAGCGGCGTGAATGTAGTCAACT
GGCCGATGGGACGGGTGCTGATGTCTTATTTTGCCTCCAAGTATGTCCGCTTCATTACCGGTATTCCGGTGCATGATACG
ACTGCCGGATTTGTATGCTACCGCCGTCAGGTGCTGGAAACAATCGATCTGGATCATGTTCGCTTCAAAGGCTACGCTTT
TCAGATCGAGATGAAGTTCACTGCTTACAAATGCGGATTCAAGATCATAGAAGTCCCCGTCATCTTCATTAACCGTGAGT
TGGGAACCTCCAAGATGAACAGCAGTATCTTTGGAGAAGCCATATTCGGAGTGATCAAGTTAAAAATAAATAGTTGGTTC
CATAAATTCCCGCAAAAGAAATGA

Upstream 100 bases:

>100_bases
TAGTTTCACACCGGGGAACAAATGCCAACACGTTAAATTATCCTTAGTCCCTTTATAACTAAAGGAAAAGCACTACATTT
GTCTTAAAAATAGGACTTCT

Downstream 100 bases:

>100_bases
AACGTATACTGATAAAAAACGCCGTAATTGTCAACGAAGGAAGAAAAGTTCCGGGATCTGTTGTTATTGAAGGTGAGAAG
ATTGCTGAGATCTTAGTTGA

Product: dolichol-phosphate mannosyltransferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MQLSDSIVIIPTYNERENIENIIRAVFGLDKVFHILVIEDGSPDGTASIVKTLQQEFPERLFMIERKGKLGLGTAYIAGF
KWALEHAYEYIFEMDADFSHNPNDLPRLYAACAKEGGDVSVGSRYVSGVNVVNWPMGRVLMSYFASKYVRFITGIPVHDT
TAGFVCYRRQVLETIDLDHVRFKGYAFQIEMKFTAYKCGFKIIEVPVIFINRELGTSKMNSSIFGEAIFGVIKLKINSWF
HKFPQKK

Sequences:

>Translated_247_residues
MQLSDSIVIIPTYNERENIENIIRAVFGLDKVFHILVIEDGSPDGTASIVKTLQQEFPERLFMIERKGKLGLGTAYIAGF
KWALEHAYEYIFEMDADFSHNPNDLPRLYAACAKEGGDVSVGSRYVSGVNVVNWPMGRVLMSYFASKYVRFITGIPVHDT
TAGFVCYRRQVLETIDLDHVRFKGYAFQIEMKFTAYKCGFKIIEVPVIFINRELGTSKMNSSIFGEAIFGVIKLKINSWF
HKFPQKK
>Mature_247_residues
MQLSDSIVIIPTYNERENIENIIRAVFGLDKVFHILVIEDGSPDGTASIVKTLQQEFPERLFMIERKGKLGLGTAYIAGF
KWALEHAYEYIFEMDADFSHNPNDLPRLYAACAKEGGDVSVGSRYVSGVNVVNWPMGRVLMSYFASKYVRFITGIPVHDT
TAGFVCYRRQVLETIDLDHVRFKGYAFQIEMKFTAYKCGFKIIEVPVIFINRELGTSKMNSSIFGEAIFGVIKLKINSWF
HKFPQKK

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=235, Percent_Identity=35.7446808510638, Blast_Score=132, Evalue=3e-31,
Organism=Escherichia coli, GI1788588, Length=215, Percent_Identity=30.2325581395349, Blast_Score=72, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71999402, Length=217, Percent_Identity=40.5529953917051, Blast_Score=150, Evalue=8e-37,
Organism=Saccharomyces cerevisiae, GI6325441, Length=226, Percent_Identity=28.3185840707965, Blast_Score=79, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24585265, Length=220, Percent_Identity=36.3636363636364, Blast_Score=131, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 28164; Mature: 28164

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSDSIVIIPTYNERENIENIIRAVFGLDKVFHILVIEDGSPDGTASIVKTLQQEFPER
CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHH
LFMIERKGKLGLGTAYIAGFKWALEHAYEYIFEMDADFSHNPNDLPRLYAACAKEGGDVS
HEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC
VGSRYVSGVNVVNWPMGRVLMSYFASKYVRFITGIPVHDTTAGFVCYRRQVLETIDLDHV
CCCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCE
RFKGYAFQIEMKFTAYKCGFKIIEVPVIFINRELGTSKMNSSIFGEAIFGVIKLKINSWF
EEEEEEEEEEEEEEEEECCEEEEEEEEEEEECCCCCHHHCHHHHHHHHHHHHHHHHHHHH
HKFPQKK
HHCCCCC
>Mature Secondary Structure
MQLSDSIVIIPTYNERENIENIIRAVFGLDKVFHILVIEDGSPDGTASIVKTLQQEFPER
CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHH
LFMIERKGKLGLGTAYIAGFKWALEHAYEYIFEMDADFSHNPNDLPRLYAACAKEGGDVS
HEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC
VGSRYVSGVNVVNWPMGRVLMSYFASKYVRFITGIPVHDTTAGFVCYRRQVLETIDLDHV
CCCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCE
RFKGYAFQIEMKFTAYKCGFKIIEVPVIFINRELGTSKMNSSIFGEAIFGVIKLKINSWF
EEEEEEEEEEEEEEEEECCEEEEEEEEEEEECCCCCHHHCHHHHHHHHHHHHHHHHHHHH
HKFPQKK
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA