| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345647
Identifier: 29345647
GI number: 29345647
Start: 259935
End: 262022
Strand: Reverse
Name: 29345647
Synonym: BT_0237
Alternate gene names: NA
Gene position: 262022-259935 (Counterclockwise)
Preceding gene: 29345648
Following gene: 29345646
Centisome position: 4.19
GC content: 41.86
Gene sequence:
>2088_bases ATGTGGTTATTGCAACTAATGCAACAGCAACATTCCATAGATATGATGAAGAAACAAGGATTAAAACTGGAAGCCCAGGA TTTATATAATCCCAATGGTGTCTCTTTGAAAGATGCAGTCGGTATATTCGGAGGAGGATGTACAGGAGAAATCATTTCAC CGGAAGGCTTGATCCTGACTAACCATCACTGCGGTTATTCTTCTATCCAGCAACACAGTAGTGTAGAACACGATTATCTG ACAGATGGCTTTTGGGCTACATCCAGAGATCAGGAACTTCCTACTCCGGGACTAAAGTTCACCTTCATCGAACGTATCGA AGATATAACAGATATTGTGAATGCTAAAATCGCCGCCAAAGAGATTACAGAATCCCAGTCATTCACCGGTGCTTTCCTTG AAGGACTGGCTAAAGAACTCTATGAAAAAAGTGACCTGAAAGATAAGAAAGGAATTGTACCGCAAGCCCTTCCTTTCTAC GCAGGAAACAAATTCTACCTGTTCTACAAGAAAATATATCCGGATGTACGTATGGTTGCCGCTCCTCCTTCTTCAGTAGG TAAATTCGGTGGCGAAACAGACAACTGGATGTGGCCCCGTCATACCGGTGACTTCTCCATGTTCCGTATCTATGCAGATG CCAACGGAGAGCCGGCTGAATACAGCGCAAGCAATACTCCGCTGAAAACGAAGAAACATCTGTCAATCTCCATCAAAGGT TTAAAAGAAGGAGACTATGCAATGATCATGGGATTCCCCGGAAGAACCAGCCGTTATCTGACTGTGTCAGAAGTAAAAGA ACGCATGGAGTCAACCAATGAACCGCGTATCCGCATTCGTGGTGCACGCCTGGCTGTTTTGAAAGAAGTGATGAACGCCA GCGATAAAATCCGTATTCAGTATGCAAACAAATATGCAGGCTCCAGTAACTACTGGAAAAACTCGATCGGAATGAACAAA GCGATCATTGACAATGACGTATTGGGCACTAAAGCAGAACAGGAAGCTAAATTTGCTGAATATGCAAAGGCACAAAACAA TACCGAATATGCCAATGTTGTGAAAAAGATCGATGATCTGGTAGCACAAACAGCTCCTCTCAATTATCAACTGACTTGCC TGACTGAAGTTTTCTTCGGAGCTATCGAATTTGGTAACTCAATGTTAACTAAAACACGGGAAGCTTTGGTTGATAAAAAC GACTCTCTGATCAAAGTTCGTCTGGAAGGTCTGAAAGAAAACTTCAAAAGCATCCATAACAAAGACTATGATCATGAAGT AGACCGCAAAGTAGCTAAAGCACTGCTTCCTCTCTATGCAGAAATGATTCCGGCAAACCAACGCCCTGCTATCTATAAAG TGATCGAGCAAAAATATAAAGGAGATTACAACAAGTTCGTAGACGATATGTACGATAAGTCTATTTTTGCCAATCAGGCT AACTTTGATAAATTCCTCAAAAAGCCGACAGTAAAAGCTATTGATGAGGATCTGGCTTTGCAATATGCCCAATCCAAATA CGATCAATACGGCAATCTCCTTGATCAGCTAAAAGAGCTAGACAAAGAACTTGCTCTGCTCCACAAAACTTACATCCGCG GTTTAGGTGAAATGAAATTGCCTGTTCCTTCATATCCGGACGCAAACTTCACCATTCGCCTGACCTATGGTAACGTAAAA CCATATGATCCGAAAGATGGTGTACACTATAACTATTACACAACAACAAAAGGTATTCTTGAAAAAGAAAATCCGGAAGA CCGCGAATTTGTGGTACCGGCCAAGTTGAAAGAACTTATAGAAAAGAAAGACTACGGTCGTTATGCATTACCTAACGGTG ATATGCCTGTCTGCTTCCTGTCAACCAATGACATTACCGGTGGTAACTCCGGTAGTCCAGTATTGAACGAAAACGGAGAA TTGATCGGCTGTGCATTCGATGGTAACTGGGAATCTCTGAGTGGTGATATTAACTTTGATAACAACTTGCAACGTTGTAT CAACCTTGATATCCGCTACGTCCTGTTTATCCTTGAGAAATTAGGAAACTGCGGCCATCTGATTAATGAAATGACTATCG TAGAATAA
Upstream 100 bases:
>100_bases CATAATTTATAATTGTTATCATAAAGTAATGAACAGACTAAGACTTTATTTATTAGCGCTGACAGCGCTGCTGGTATGTA CCGTAAAAGCGGACGAAGGT
Downstream 100 bases:
>100_bases ATGAGAAAACAAATTATATTTGCTATTTTTTCACTGGCAACTCTTAGCATCCACGCCGATGAAGGTATGTGGATGCTAAC TGACCTGAAAGCACAAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MWLLQLMQQQHSIDMMKKQGLKLEAQDLYNPNGVSLKDAVGIFGGGCTGEIISPEGLILTNHHCGYSSIQQHSSVEHDYL TDGFWATSRDQELPTPGLKFTFIERIEDITDIVNAKIAAKEITESQSFTGAFLEGLAKELYEKSDLKDKKGIVPQALPFY AGNKFYLFYKKIYPDVRMVAAPPSSVGKFGGETDNWMWPRHTGDFSMFRIYADANGEPAEYSASNTPLKTKKHLSISIKG LKEGDYAMIMGFPGRTSRYLTVSEVKERMESTNEPRIRIRGARLAVLKEVMNASDKIRIQYANKYAGSSNYWKNSIGMNK AIIDNDVLGTKAEQEAKFAEYAKAQNNTEYANVVKKIDDLVAQTAPLNYQLTCLTEVFFGAIEFGNSMLTKTREALVDKN DSLIKVRLEGLKENFKSIHNKDYDHEVDRKVAKALLPLYAEMIPANQRPAIYKVIEQKYKGDYNKFVDDMYDKSIFANQA NFDKFLKKPTVKAIDEDLALQYAQSKYDQYGNLLDQLKELDKELALLHKTYIRGLGEMKLPVPSYPDANFTIRLTYGNVK PYDPKDGVHYNYYTTTKGILEKENPEDREFVVPAKLKELIEKKDYGRYALPNGDMPVCFLSTNDITGGNSGSPVLNENGE LIGCAFDGNWESLSGDINFDNNLQRCINLDIRYVLFILEKLGNCGHLINEMTIVE
Sequences:
>Translated_695_residues MWLLQLMQQQHSIDMMKKQGLKLEAQDLYNPNGVSLKDAVGIFGGGCTGEIISPEGLILTNHHCGYSSIQQHSSVEHDYL TDGFWATSRDQELPTPGLKFTFIERIEDITDIVNAKIAAKEITESQSFTGAFLEGLAKELYEKSDLKDKKGIVPQALPFY AGNKFYLFYKKIYPDVRMVAAPPSSVGKFGGETDNWMWPRHTGDFSMFRIYADANGEPAEYSASNTPLKTKKHLSISIKG LKEGDYAMIMGFPGRTSRYLTVSEVKERMESTNEPRIRIRGARLAVLKEVMNASDKIRIQYANKYAGSSNYWKNSIGMNK AIIDNDVLGTKAEQEAKFAEYAKAQNNTEYANVVKKIDDLVAQTAPLNYQLTCLTEVFFGAIEFGNSMLTKTREALVDKN DSLIKVRLEGLKENFKSIHNKDYDHEVDRKVAKALLPLYAEMIPANQRPAIYKVIEQKYKGDYNKFVDDMYDKSIFANQA NFDKFLKKPTVKAIDEDLALQYAQSKYDQYGNLLDQLKELDKELALLHKTYIRGLGEMKLPVPSYPDANFTIRLTYGNVK PYDPKDGVHYNYYTTTKGILEKENPEDREFVVPAKLKELIEKKDYGRYALPNGDMPVCFLSTNDITGGNSGSPVLNENGE LIGCAFDGNWESLSGDINFDNNLQRCINLDIRYVLFILEKLGNCGHLINEMTIVE >Mature_695_residues MWLLQLMQQQHSIDMMKKQGLKLEAQDLYNPNGVSLKDAVGIFGGGCTGEIISPEGLILTNHHCGYSSIQQHSSVEHDYL TDGFWATSRDQELPTPGLKFTFIERIEDITDIVNAKIAAKEITESQSFTGAFLEGLAKELYEKSDLKDKKGIVPQALPFY AGNKFYLFYKKIYPDVRMVAAPPSSVGKFGGETDNWMWPRHTGDFSMFRIYADANGEPAEYSASNTPLKTKKHLSISIKG LKEGDYAMIMGFPGRTSRYLTVSEVKERMESTNEPRIRIRGARLAVLKEVMNASDKIRIQYANKYAGSSNYWKNSIGMNK AIIDNDVLGTKAEQEAKFAEYAKAQNNTEYANVVKKIDDLVAQTAPLNYQLTCLTEVFFGAIEFGNSMLTKTREALVDKN DSLIKVRLEGLKENFKSIHNKDYDHEVDRKVAKALLPLYAEMIPANQRPAIYKVIEQKYKGDYNKFVDDMYDKSIFANQA NFDKFLKKPTVKAIDEDLALQYAQSKYDQYGNLLDQLKELDKELALLHKTYIRGLGEMKLPVPSYPDANFTIRLTYGNVK PYDPKDGVHYNYYTTTKGILEKENPEDREFVVPAKLKELIEKKDYGRYALPNGDMPVCFLSTNDITGGNSGSPVLNENGE LIGCAFDGNWESLSGDINFDNNLQRCINLDIRYVLFILEKLGNCGHLINEMTIVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78621; Mature: 78621
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLLQLMQQQHSIDMMKKQGLKLEAQDLYNPNGVSLKDAVGIFGGGCTGEIISPEGLILT CHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCCCHHHHHHHCCCCCCCCEECCCCEEEE NHHCGYSSIQQHSSVEHDYLTDGFWATSRDQELPTPGLKFTFIERIEDITDIVNAKIAAK CCCCCHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EITESQSFTGAFLEGLAKELYEKSDLKDKKGIVPQALPFYAGNKFYLFYKKIYPDVRMVA HHHHCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEEEHHHCCCCEEEE APPSSVGKFGGETDNWMWPRHTGDFSMFRIYADANGEPAEYSASNTPLKTKKHLSISIKG CCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEE LKEGDYAMIMGFPGRTSRYLTVSEVKERMESTNEPRIRIRGARLAVLKEVMNASDKIRIQ CCCCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCEEEEE YANKYAGSSNYWKNSIGMNKAIIDNDVLGTKAEQEAKFAEYAKAQNNTEYANVVKKIDDL EECCCCCCCCCCHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH VAQTAPLNYQLTCLTEVFFGAIEFGNSMLTKTREALVDKNDSLIKVRLEGLKENFKSIHN HHHCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCC KDYDHEVDRKVAKALLPLYAEMIPANQRPAIYKVIEQKYKGDYNKFVDDMYDKSIFANQA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC NFDKFLKKPTVKAIDEDLALQYAQSKYDQYGNLLDQLKELDKELALLHKTYIRGLGEMKL CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PVPSYPDANFTIRLTYGNVKPYDPKDGVHYNYYTTTKGILEKENPEDREFVVPAKLKELI CCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCHHHHHHH EKKDYGRYALPNGDMPVCFLSTNDITGGNSGSPVLNENGELIGCAFDGNWESLSGDINFD HHCCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCC NNLQRCINLDIRYVLFILEKLGNCGHLINEMTIVE CCHHHHHCCHHHHHHHHHHHHCCHHHHHHHHEECC >Mature Secondary Structure MWLLQLMQQQHSIDMMKKQGLKLEAQDLYNPNGVSLKDAVGIFGGGCTGEIISPEGLILT CHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCCCHHHHHHHCCCCCCCCEECCCCEEEE NHHCGYSSIQQHSSVEHDYLTDGFWATSRDQELPTPGLKFTFIERIEDITDIVNAKIAAK CCCCCHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EITESQSFTGAFLEGLAKELYEKSDLKDKKGIVPQALPFYAGNKFYLFYKKIYPDVRMVA HHHHCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEEEHHHCCCCEEEE APPSSVGKFGGETDNWMWPRHTGDFSMFRIYADANGEPAEYSASNTPLKTKKHLSISIKG CCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEE LKEGDYAMIMGFPGRTSRYLTVSEVKERMESTNEPRIRIRGARLAVLKEVMNASDKIRIQ CCCCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCEEEEE YANKYAGSSNYWKNSIGMNKAIIDNDVLGTKAEQEAKFAEYAKAQNNTEYANVVKKIDDL EECCCCCCCCCCHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH VAQTAPLNYQLTCLTEVFFGAIEFGNSMLTKTREALVDKNDSLIKVRLEGLKENFKSIHN HHHCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCC KDYDHEVDRKVAKALLPLYAEMIPANQRPAIYKVIEQKYKGDYNKFVDDMYDKSIFANQA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC NFDKFLKKPTVKAIDEDLALQYAQSKYDQYGNLLDQLKELDKELALLHKTYIRGLGEMKL CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PVPSYPDANFTIRLTYGNVKPYDPKDGVHYNYYTTTKGILEKENPEDREFVVPAKLKELI CCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCHHHHHHH EKKDYGRYALPNGDMPVCFLSTNDITGGNSGSPVLNENGELIGCAFDGNWESLSGDINFD HHCCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCC NNLQRCINLDIRYVLFILEKLGNCGHLINEMTIVE CCHHHHHCCHHHHHHHHHHHHCCHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA