Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345637

Identifier: 29345637

GI number: 29345637

Start: 246480

End: 247109

Strand: Reverse

Name: 29345637

Synonym: BT_0227

Alternate gene names: NA

Gene position: 247109-246480 (Counterclockwise)

Preceding gene: 29345638

Following gene: 29345636

Centisome position: 3.95

GC content: 41.27

Gene sequence:

>630_bases
ATGAAAAAGATTTTATTATCATTGCTTGCATTAGGTTGTTTTTCAGCCGCAAATGCACAAACATTCCGCTTCGGTCCAAC
TGTAGGAGGAAATCTGAACATTTCTGATGAGACAAAAACAAAGATCGGTTTTGCTGTAGGTGCAAAAGCAGAAATGAACT
TCAACAACCCAGAGAACGGTTGGTTTATGGATGCTTCGGTCTTGTTCAACAACAGAAACAGACAGAGCGAAAACTATTTC
AATAACGAAACAAAGTTGACTCAGTGCTGGAAGTACTCAACCTACTCTCTTCTCGTTCCAGTCAATGTAGGCTACAAATT
CCGCCTTTCAGACAACTTGAATCTCCTCGCTGCTGTTGGCCCTTATGCAGATTTTGGCTTGACAGGTACGGACAAAGTCA
CAACGACTGATGCTAAAGGACATAGCAAAGAGGAGAAAATGTCCTCAAATGTTTACGGAGACAAACTCTTCAATCGTGTA
AACTTCGGCTTCGATGCCAAGGTTGGCGTTGAAATCGCCAAGCACTACCAGCTTAGCCTTTCTTATAGTAGAGGATTTAC
CAATATCTTTAAAGGTGGACTCAATACTAAAGCCCAAGACCTACAGTTGGGATTCTCATATATGTTCTAA

Upstream 100 bases:

>100_bases
CATAAGGAGGCGTTGTGTATAAAAACAAACGATTGTACTTTTGCATAATAATAAGTTCTTAGGCAACTTGTCCTTGAGCA
TAATTTAATCATAACAACAT

Downstream 100 bases:

>100_bases
CAACCCCATACACAAATACAATGGAATTGAATAGAATTATCCATTCGGTTCAACTCCTGACAGCCGGAGTCATTTTAACC
TCATGTATCGAGGTGAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKKILLSLLALGCFSAANAQTFRFGPTVGGNLNISDETKTKIGFAVGAKAEMNFNNPENGWFMDASVLFNNRNRQSENYF
NNETKLTQCWKYSTYSLLVPVNVGYKFRLSDNLNLLAAVGPYADFGLTGTDKVTTTDAKGHSKEEKMSSNVYGDKLFNRV
NFGFDAKVGVEIAKHYQLSLSYSRGFTNIFKGGLNTKAQDLQLGFSYMF

Sequences:

>Translated_209_residues
MKKILLSLLALGCFSAANAQTFRFGPTVGGNLNISDETKTKIGFAVGAKAEMNFNNPENGWFMDASVLFNNRNRQSENYF
NNETKLTQCWKYSTYSLLVPVNVGYKFRLSDNLNLLAAVGPYADFGLTGTDKVTTTDAKGHSKEEKMSSNVYGDKLFNRV
NFGFDAKVGVEIAKHYQLSLSYSRGFTNIFKGGLNTKAQDLQLGFSYMF
>Mature_209_residues
MKKILLSLLALGCFSAANAQTFRFGPTVGGNLNISDETKTKIGFAVGAKAEMNFNNPENGWFMDASVLFNNRNRQSENYF
NNETKLTQCWKYSTYSLLVPVNVGYKFRLSDNLNLLAAVGPYADFGLTGTDKVTTTDAKGHSKEEKMSSNVYGDKLFNRV
NFGFDAKVGVEIAKHYQLSLSYSRGFTNIFKGGLNTKAQDLQLGFSYMF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23240; Mature: 23240

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILLSLLALGCFSAANAQTFRFGPTVGGNLNISDETKTKIGFAVGAKAEMNFNNPENG
CHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCCCCEEEEEECCEEEECCCCCCCC
WFMDASVLFNNRNRQSENYFNNETKLTQCWKYSTYSLLVPVNVGYKFRLSDNLNLLAAVG
EEEEEEEEECCCCCCCCCCCCCCCHHHEEEEECCEEEEEEECCCEEEEECCCCEEEEEEC
PYADFGLTGTDKVTTTDAKGHSKEEKMSSNVYGDKLFNRVNFGFDAKVGVEIAKHYQLSL
CCCCCCCCCCCCEEECCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCHHHHEEEEEEEEEE
SYSRGFTNIFKGGLNTKAQDLQLGFSYMF
EECCCCHHHHHCCCCCCHHHEEECEEECC
>Mature Secondary Structure
MKKILLSLLALGCFSAANAQTFRFGPTVGGNLNISDETKTKIGFAVGAKAEMNFNNPENG
CHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCCCCEEEEEECCEEEECCCCCCCC
WFMDASVLFNNRNRQSENYFNNETKLTQCWKYSTYSLLVPVNVGYKFRLSDNLNLLAAVG
EEEEEEEEECCCCCCCCCCCCCCCHHHEEEEECCEEEEEEECCCEEEEECCCCEEEEEEC
PYADFGLTGTDKVTTTDAKGHSKEEKMSSNVYGDKLFNRVNFGFDAKVGVEIAKHYQLSL
CCCCCCCCCCCCEEECCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCHHHHEEEEEEEEEE
SYSRGFTNIFKGGLNTKAQDLQLGFSYMF
EECCCCHHHHHCCCCCCHHHEEECEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA