| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345577
Identifier: 29345577
GI number: 29345577
Start: 176559
End: 176897
Strand: Reverse
Name: 29345577
Synonym: BT_0167
Alternate gene names: NA
Gene position: 176897-176559 (Counterclockwise)
Preceding gene: 29345578
Following gene: 29345574
Centisome position: 2.83
GC content: 33.33
Gene sequence:
>339_bases ATGGATGACTTAATAAAGAAACACTTGCAAGATATTCTAACTGCCATTGAAGAAGTGGAAGGTTTCTTCGGCAATGCTCC TAAAGTTTATGATGACTTCTATAGTAACCTATGCCTTAGACGAGCCGTTGAAAGGAATATAGAAATCATTGGTGAAGCTA TGAATAGAATACTAAAAGTTGATAAGGATATAGCTATAACCAATTCTCGTAAAATAGTAGATGCCAGAAATTATATCATA CATGGCTATGATAGTCTATCTGTAGATATACTTTGGAGCATGGTTATTAATCATCTGCCAAAGCTTAGAAATGAAGTCAT AACATTACTAAAGACATGA
Upstream 100 bases:
>100_bases TTAGAGAATCTGTTTGGCAGAGAAGTTGATTTACTGGAAGAACAAACGATTAAGAATCCATATCTGAAGAAGAATGTGGA TGCAACTAAAACTTTAATCT
Downstream 100 bases:
>100_bases GATTAGTTACACAAAATTGTGGACAGTGCCGTATATCTGTTCTTTCGCACTCACACAGATGTATACTATTTGCACCATTA AAAATAGAAAAAGCCAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MDDLIKKHLQDILTAIEEVEGFFGNAPKVYDDFYSNLCLRRAVERNIEIIGEAMNRILKVDKDIAITNSRKIVDARNYII HGYDSLSVDILWSMVINHLPKLRNEVITLLKT
Sequences:
>Translated_112_residues MDDLIKKHLQDILTAIEEVEGFFGNAPKVYDDFYSNLCLRRAVERNIEIIGEAMNRILKVDKDIAITNSRKIVDARNYII HGYDSLSVDILWSMVINHLPKLRNEVITLLKT >Mature_112_residues MDDLIKKHLQDILTAIEEVEGFFGNAPKVYDDFYSNLCLRRAVERNIEIIGEAMNRILKVDKDIAITNSRKIVDARNYII HGYDSLSVDILWSMVINHLPKLRNEVITLLKT
Specific function: Unknown
COG id: COG2361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12958; Mature: 12958
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDLIKKHLQDILTAIEEVEGFFGNAPKVYDDFYSNLCLRRAVERNIEIIGEAMNRILKV CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKDIAITNSRKIVDARNYIIHGYDSLSVDILWSMVINHLPKLRNEVITLLKT CCCEEECCCCHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDDLIKKHLQDILTAIEEVEGFFGNAPKVYDDFYSNLCLRRAVERNIEIIGEAMNRILKV CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKDIAITNSRKIVDARNYIIHGYDSLSVDILWSMVINHLPKLRNEVITLLKT CCCEEECCCCHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA