| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345523
Identifier: 29345523
GI number: 29345523
Start: 105024
End: 105524
Strand: Reverse
Name: 29345523
Synonym: BT_0113
Alternate gene names: NA
Gene position: 105524-105024 (Counterclockwise)
Preceding gene: 29345524
Following gene: 29345522
Centisome position: 1.69
GC content: 37.72
Gene sequence:
>501_bases ATGGGCAAGTCAGGAACAATTTGGTCGATGATAGCAAGTGTAATATCACCATTACTTGCTTTATTAGGTGTAATAAGTTG CTGTGGGCTACCTATATTAGCCGGAATATTAGCAACATTAGGAATTGGAGCGTCACAACTTAGTTTTTTTGCAGAGTATA AAGGTTGGTTTATTGGCTTTGCCATCATCTCCCTACTCTTTGGCTTTTATCAAGTTTATTTCAAAAAAGAAACTTGTGGA TGTGGAACGAATGTTTCAGAAACAAATCTGAAAAGACGTTCCAAATCAAAGTCTTTCCAAAAATTCTTCTTGTGGTTAGG TGTGGCAATACTTGTATTCGTTCTGTTTATTGGAAATAAAAATCAAACAGTCCAAAGCAATGAAAGTGGCGGATGCTGCC CGGCAAACACACAATCAGTGCAACCAGAAGAAAAGAAATGTTGCGGAACACAGCCACAACCTGAACAGGAAGAAAGCTGT TGTGACACTACATTTAATTAA
Upstream 100 bases:
>100_bases TGGCTACCGTAGTAGGCGTATTGGTTGAAGTTCCAGTAATGCTTATGTTAGTAAAAATAGCCAATAATACAAGAAGTTGG TTTCCTAAAGTAAAATAAGA
Downstream 100 bases:
>100_bases TAAATAGTTTTTAATTCAATAGATTATGAATACTTTATTAGACACATTACAATACTTCGTATTTATTACGATTGAGTTGA TAGCCTTATTTCTGTTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MGKSGTIWSMIASVISPLLALLGVISCCGLPILAGILATLGIGASQLSFFAEYKGWFIGFAIISLLFGFYQVYFKKETCG CGTNVSETNLKRRSKSKSFQKFFLWLGVAILVFVLFIGNKNQTVQSNESGGCCPANTQSVQPEEKKCCGTQPQPEQEESC CDTTFN
Sequences:
>Translated_166_residues MGKSGTIWSMIASVISPLLALLGVISCCGLPILAGILATLGIGASQLSFFAEYKGWFIGFAIISLLFGFYQVYFKKETCG CGTNVSETNLKRRSKSKSFQKFFLWLGVAILVFVLFIGNKNQTVQSNESGGCCPANTQSVQPEEKKCCGTQPQPEQEESC CDTTFN >Mature_165_residues GKSGTIWSMIASVISPLLALLGVISCCGLPILAGILATLGIGASQLSFFAEYKGWFIGFAIISLLFGFYQVYFKKETCGC GTNVSETNLKRRSKSKSFQKFFLWLGVAILVFVLFIGNKNQTVQSNESGGCCPANTQSVQPEEKKCCGTQPQPEQEESCC DTTFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18010; Mature: 17879
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSGTIWSMIASVISPLLALLGVISCCGLPILAGILATLGIGASQLSFFAEYKGWFIGF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AIISLLFGFYQVYFKKETCGCGTNVSETNLKRRSKSKSFQKFFLWLGVAILVFVLFIGNK HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NQTVQSNESGGCCPANTQSVQPEEKKCCGTQPQPEQEESCCDTTFN CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCC >Mature Secondary Structure GKSGTIWSMIASVISPLLALLGVISCCGLPILAGILATLGIGASQLSFFAEYKGWFIGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AIISLLFGFYQVYFKKETCGCGTNVSETNLKRRSKSKSFQKFFLWLGVAILVFVLFIGNK HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NQTVQSNESGGCCPANTQSVQPEEKKCCGTQPQPEQEESCCDTTFN CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA