| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345520
Identifier: 29345520
GI number: 29345520
Start: 102836
End: 103696
Strand: Reverse
Name: 29345520
Synonym: BT_0110
Alternate gene names: NA
Gene position: 103696-102836 (Counterclockwise)
Preceding gene: 29345521
Following gene: 29345519
Centisome position: 1.66
GC content: 32.4
Gene sequence:
>861_bases ATGAATAGCGAAATCGAATATGAGAATTTTATAAAGAACATAGACCTTGTAATCTATGATAAAATAGATATTGATAATTG GAATATTTCAATAGACTTAATATTTGAAGTAGTAGAGTTCCTACAAAAATCACTCGAAGAATTAAGAACGATTATTATTG AGCATCCGTTTGAAAGTAAAGAAGAGGAAATTTATTTTTTCAAATATATAAAACCGGAAGTCTTGGGACGATTATTATAC TTCACAGATGTGTATAACGCTGAAATGAGAAAACCGAATGGTAGCATTGAGGTAGTAAAGAAGCACTACAATGACAGATT GGATGAACTGACCTCCTATTTTGAAAGTAATTTAGACTTCTATCAATATTACCGTTCCAAAGCGACACATTTAGATAATC ATTATTTTGTAAGGGGGCATATTGATTTTAAACTATGCCCGAATTGTACCCCTTATGACCGTGACCCGGAATTTTCAACT TGCTACGACCACAAAGCAGCACAAATATTAGCAAATGATATGCTTAGCATTTATTTGAATAAAAGGCTACATTATGTAGA TAAGCAAATAATCATTGAAGAAAGTCGAGCATTTCTTTCTGAACACCCTTTTCGATGGACTGCTCCAAAGATAGCATTAG TAGAACTTGGATATTCTATTTATGCTGCGTGTGTCTTGAATAATGGTAAAGCAGATATTAAAGAGATTATGACTTATTTA GAAGCATCTTTCAAAGTTGATTTAGGGGATTACTATCGGACTTATATAACAATAAAAGACCGGAAGAAAGACCGGACTTC ATTTCTTAGTAACCTAATAAAGTGTTTGCTGAAGAAAATGGATGAAGACGACAACTTATAA
Upstream 100 bases:
>100_bases GTAGGAAGTATGCTCACATACTTTCTACATTTATTTATTGTATATTAAAATATAAAAATAAACTTCTATTTGCAATATAA ATGACAGAAGAATATATGAC
Downstream 100 bases:
>100_bases AAAACAAAAGCACAAAAACAACCAAGTATCTACCAACTTGGTTGTTTTTGTTTTTACCCGTTTTCACCCATTTTTTCTTA CTTTTCAGCTCAAAACAGAT
Product: putative regulatory protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MNSEIEYENFIKNIDLVIYDKIDIDNWNISIDLIFEVVEFLQKSLEELRTIIIEHPFESKEEEIYFFKYIKPEVLGRLLY FTDVYNAEMRKPNGSIEVVKKHYNDRLDELTSYFESNLDFYQYYRSKATHLDNHYFVRGHIDFKLCPNCTPYDRDPEFST CYDHKAAQILANDMLSIYLNKRLHYVDKQIIIEESRAFLSEHPFRWTAPKIALVELGYSIYAACVLNNGKADIKEIMTYL EASFKVDLGDYYRTYITIKDRKKDRTSFLSNLIKCLLKKMDEDDNL
Sequences:
>Translated_286_residues MNSEIEYENFIKNIDLVIYDKIDIDNWNISIDLIFEVVEFLQKSLEELRTIIIEHPFESKEEEIYFFKYIKPEVLGRLLY FTDVYNAEMRKPNGSIEVVKKHYNDRLDELTSYFESNLDFYQYYRSKATHLDNHYFVRGHIDFKLCPNCTPYDRDPEFST CYDHKAAQILANDMLSIYLNKRLHYVDKQIIIEESRAFLSEHPFRWTAPKIALVELGYSIYAACVLNNGKADIKEIMTYL EASFKVDLGDYYRTYITIKDRKKDRTSFLSNLIKCLLKKMDEDDNL >Mature_286_residues MNSEIEYENFIKNIDLVIYDKIDIDNWNISIDLIFEVVEFLQKSLEELRTIIIEHPFESKEEEIYFFKYIKPEVLGRLLY FTDVYNAEMRKPNGSIEVVKKHYNDRLDELTSYFESNLDFYQYYRSKATHLDNHYFVRGHIDFKLCPNCTPYDRDPEFST CYDHKAAQILANDMLSIYLNKRLHYVDKQIIIEESRAFLSEHPFRWTAPKIALVELGYSIYAACVLNNGKADIKEIMTYL EASFKVDLGDYYRTYITIKDRKKDRTSFLSNLIKCLLKKMDEDDNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34157; Mature: 34157
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSEIEYENFIKNIDLVIYDKIDIDNWNISIDLIFEVVEFLQKSLEELRTIIIEHPFESK CCCCCCHHHHHCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EEEIYFFKYIKPEVLGRLLYFTDVYNAEMRKPNGSIEVVKKHYNDRLDELTSYFESNLDF CCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH YQYYRSKATHLDNHYFVRGHIDFKLCPNCTPYDRDPEFSTCYDHKAAQILANDMLSIYLN HHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KRLHYVDKQIIIEESRAFLSEHPFRWTAPKIALVELGYSIYAACVLNNGKADIKEIMTYL HHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEHHCHHHEEEEEECCCCHHHHHHHHHH EASFKVDLGDYYRTYITIKDRKKDRTSFLSNLIKCLLKKMDEDDNL HHHCEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNSEIEYENFIKNIDLVIYDKIDIDNWNISIDLIFEVVEFLQKSLEELRTIIIEHPFESK CCCCCCHHHHHCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EEEIYFFKYIKPEVLGRLLYFTDVYNAEMRKPNGSIEVVKKHYNDRLDELTSYFESNLDF CCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH YQYYRSKATHLDNHYFVRGHIDFKLCPNCTPYDRDPEFSTCYDHKAAQILANDMLSIYLN HHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KRLHYVDKQIIIEESRAFLSEHPFRWTAPKIALVELGYSIYAACVLNNGKADIKEIMTYL HHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEHHCHHHEEEEEECCCCHHHHHHHHHH EASFKVDLGDYYRTYITIKDRKKDRTSFLSNLIKCLLKKMDEDDNL HHHCEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA