Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29345520

Identifier: 29345520

GI number: 29345520

Start: 102836

End: 103696

Strand: Reverse

Name: 29345520

Synonym: BT_0110

Alternate gene names: NA

Gene position: 103696-102836 (Counterclockwise)

Preceding gene: 29345521

Following gene: 29345519

Centisome position: 1.66

GC content: 32.4

Gene sequence:

>861_bases
ATGAATAGCGAAATCGAATATGAGAATTTTATAAAGAACATAGACCTTGTAATCTATGATAAAATAGATATTGATAATTG
GAATATTTCAATAGACTTAATATTTGAAGTAGTAGAGTTCCTACAAAAATCACTCGAAGAATTAAGAACGATTATTATTG
AGCATCCGTTTGAAAGTAAAGAAGAGGAAATTTATTTTTTCAAATATATAAAACCGGAAGTCTTGGGACGATTATTATAC
TTCACAGATGTGTATAACGCTGAAATGAGAAAACCGAATGGTAGCATTGAGGTAGTAAAGAAGCACTACAATGACAGATT
GGATGAACTGACCTCCTATTTTGAAAGTAATTTAGACTTCTATCAATATTACCGTTCCAAAGCGACACATTTAGATAATC
ATTATTTTGTAAGGGGGCATATTGATTTTAAACTATGCCCGAATTGTACCCCTTATGACCGTGACCCGGAATTTTCAACT
TGCTACGACCACAAAGCAGCACAAATATTAGCAAATGATATGCTTAGCATTTATTTGAATAAAAGGCTACATTATGTAGA
TAAGCAAATAATCATTGAAGAAAGTCGAGCATTTCTTTCTGAACACCCTTTTCGATGGACTGCTCCAAAGATAGCATTAG
TAGAACTTGGATATTCTATTTATGCTGCGTGTGTCTTGAATAATGGTAAAGCAGATATTAAAGAGATTATGACTTATTTA
GAAGCATCTTTCAAAGTTGATTTAGGGGATTACTATCGGACTTATATAACAATAAAAGACCGGAAGAAAGACCGGACTTC
ATTTCTTAGTAACCTAATAAAGTGTTTGCTGAAGAAAATGGATGAAGACGACAACTTATAA

Upstream 100 bases:

>100_bases
GTAGGAAGTATGCTCACATACTTTCTACATTTATTTATTGTATATTAAAATATAAAAATAAACTTCTATTTGCAATATAA
ATGACAGAAGAATATATGAC

Downstream 100 bases:

>100_bases
AAAACAAAAGCACAAAAACAACCAAGTATCTACCAACTTGGTTGTTTTTGTTTTTACCCGTTTTCACCCATTTTTTCTTA
CTTTTCAGCTCAAAACAGAT

Product: putative regulatory protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MNSEIEYENFIKNIDLVIYDKIDIDNWNISIDLIFEVVEFLQKSLEELRTIIIEHPFESKEEEIYFFKYIKPEVLGRLLY
FTDVYNAEMRKPNGSIEVVKKHYNDRLDELTSYFESNLDFYQYYRSKATHLDNHYFVRGHIDFKLCPNCTPYDRDPEFST
CYDHKAAQILANDMLSIYLNKRLHYVDKQIIIEESRAFLSEHPFRWTAPKIALVELGYSIYAACVLNNGKADIKEIMTYL
EASFKVDLGDYYRTYITIKDRKKDRTSFLSNLIKCLLKKMDEDDNL

Sequences:

>Translated_286_residues
MNSEIEYENFIKNIDLVIYDKIDIDNWNISIDLIFEVVEFLQKSLEELRTIIIEHPFESKEEEIYFFKYIKPEVLGRLLY
FTDVYNAEMRKPNGSIEVVKKHYNDRLDELTSYFESNLDFYQYYRSKATHLDNHYFVRGHIDFKLCPNCTPYDRDPEFST
CYDHKAAQILANDMLSIYLNKRLHYVDKQIIIEESRAFLSEHPFRWTAPKIALVELGYSIYAACVLNNGKADIKEIMTYL
EASFKVDLGDYYRTYITIKDRKKDRTSFLSNLIKCLLKKMDEDDNL
>Mature_286_residues
MNSEIEYENFIKNIDLVIYDKIDIDNWNISIDLIFEVVEFLQKSLEELRTIIIEHPFESKEEEIYFFKYIKPEVLGRLLY
FTDVYNAEMRKPNGSIEVVKKHYNDRLDELTSYFESNLDFYQYYRSKATHLDNHYFVRGHIDFKLCPNCTPYDRDPEFST
CYDHKAAQILANDMLSIYLNKRLHYVDKQIIIEESRAFLSEHPFRWTAPKIALVELGYSIYAACVLNNGKADIKEIMTYL
EASFKVDLGDYYRTYITIKDRKKDRTSFLSNLIKCLLKKMDEDDNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34157; Mature: 34157

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSEIEYENFIKNIDLVIYDKIDIDNWNISIDLIFEVVEFLQKSLEELRTIIIEHPFESK
CCCCCCHHHHHCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EEEIYFFKYIKPEVLGRLLYFTDVYNAEMRKPNGSIEVVKKHYNDRLDELTSYFESNLDF
CCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
YQYYRSKATHLDNHYFVRGHIDFKLCPNCTPYDRDPEFSTCYDHKAAQILANDMLSIYLN
HHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KRLHYVDKQIIIEESRAFLSEHPFRWTAPKIALVELGYSIYAACVLNNGKADIKEIMTYL
HHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEHHCHHHEEEEEECCCCHHHHHHHHHH
EASFKVDLGDYYRTYITIKDRKKDRTSFLSNLIKCLLKKMDEDDNL
HHHCEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNSEIEYENFIKNIDLVIYDKIDIDNWNISIDLIFEVVEFLQKSLEELRTIIIEHPFESK
CCCCCCHHHHHCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EEEIYFFKYIKPEVLGRLLYFTDVYNAEMRKPNGSIEVVKKHYNDRLDELTSYFESNLDF
CCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
YQYYRSKATHLDNHYFVRGHIDFKLCPNCTPYDRDPEFSTCYDHKAAQILANDMLSIYLN
HHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KRLHYVDKQIIIEESRAFLSEHPFRWTAPKIALVELGYSIYAACVLNNGKADIKEIMTYL
HHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEHHCHHHEEEEEECCCCHHHHHHHHHH
EASFKVDLGDYYRTYITIKDRKKDRTSFLSNLIKCLLKKMDEDDNL
HHHCEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA