| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345496
Identifier: 29345496
GI number: 29345496
Start: 80125
End: 81033
Strand: Reverse
Name: 29345496
Synonym: BT_0086
Alternate gene names: NA
Gene position: 81033-80125 (Counterclockwise)
Preceding gene: 29345497
Following gene: 29345495
Centisome position: 1.29
GC content: 45.54
Gene sequence:
>909_bases ATGAAAAAGTTAATTATCATGTTCGCCCTACTCTTGGGCGTGGTTTCAATGAAAGCACAAAGTAACGATTTGTATCAGGG CATTACTAAAAAGCTGCCTTACCGCCAAATGGTGACACCTTACGGCGTACAGGTGACGTTCGCCAAAACGGTACATATCA TTTTCCCGTCTGCCGTTAAGTACGTGGACTTAGGCAGTAACTACATTATTGCCGGAAAAGCGGACGGGGCGGAAAATGTT GTCAGGGTCAAGGCTACGACAGAGGGCTTTCCCGGTGAAACCAATTTTTCCGTTATCTGTGAGGATGGCAGCTTTTACAG TTTTAACGCAAAATACGCACACGAACCGGAAATGCTGAACATCGAAATGAAAGACTTCTTGGAGAATGAGGACACAACGG ATTTCAGCCATACCCGGATGAACATCTATTTCCGTGAACTGGGTAACGAAAGCCCGCTTTTGGTAAAGCTGATTATGCAG TCCATCTACAAGAACAATGACCGGGAAATAAAGCATTTGGGATGCAAACGGTTCGGGGTGCAGTTCTTGGTAAAGGGGAT TTATTCGCATAACGGGCTGTTCTACTTCCACACACAAACAAAGAACAGTTCAAACGTGCCGTTTGATACCGACTTTATCC GTTTCAAGATTGTGGATAAGAAAGTAGCCAAAAGAACGGCTATTCAGGAAACCGTTATCGACCCGGTGCGGAGCTATAAC GAGATACTGGTTATCGGCGGCAAAAGTACCGTCCGCACCGTGTACACCGTTCCGCAGTTCACTATCCCTGACGATAAGAT ATTAGTCATCGAACTGGTGGAAAAGAACGGGGGCAGACACCAAACTATCCGGGTGGAAAATTCGGATGTAGTGGCTGCCA AAGTGATTAACGAACTTAAAATCAAATGA
Upstream 100 bases:
>100_bases GTTCAGAACGGTAAAAGTACACCTGAAAGCGAACTATCAGGTGATGCTTTACGCCAAACAACAGTAATTTATTTATCAAC CATAAAAATTTCAATCCAAA
Downstream 100 bases:
>100_bases ACATGAAAAGGATATGTTGTATTATATCCCTTTTTGTGCTGTGCCTGACTTTCAACCAGGCACACGCACAAAGATGTCTG CCGGGAATGAAAGGCTTGCA
Product: conjugate transposon protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKKLIIMFALLLGVVSMKAQSNDLYQGITKKLPYRQMVTPYGVQVTFAKTVHIIFPSAVKYVDLGSNYIIAGKADGAENV VRVKATTEGFPGETNFSVICEDGSFYSFNAKYAHEPEMLNIEMKDFLENEDTTDFSHTRMNIYFRELGNESPLLVKLIMQ SIYKNNDREIKHLGCKRFGVQFLVKGIYSHNGLFYFHTQTKNSSNVPFDTDFIRFKIVDKKVAKRTAIQETVIDPVRSYN EILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRHQTIRVENSDVVAAKVINELKIK
Sequences:
>Translated_302_residues MKKLIIMFALLLGVVSMKAQSNDLYQGITKKLPYRQMVTPYGVQVTFAKTVHIIFPSAVKYVDLGSNYIIAGKADGAENV VRVKATTEGFPGETNFSVICEDGSFYSFNAKYAHEPEMLNIEMKDFLENEDTTDFSHTRMNIYFRELGNESPLLVKLIMQ SIYKNNDREIKHLGCKRFGVQFLVKGIYSHNGLFYFHTQTKNSSNVPFDTDFIRFKIVDKKVAKRTAIQETVIDPVRSYN EILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRHQTIRVENSDVVAAKVINELKIK >Mature_302_residues MKKLIIMFALLLGVVSMKAQSNDLYQGITKKLPYRQMVTPYGVQVTFAKTVHIIFPSAVKYVDLGSNYIIAGKADGAENV VRVKATTEGFPGETNFSVICEDGSFYSFNAKYAHEPEMLNIEMKDFLENEDTTDFSHTRMNIYFRELGNESPLLVKLIMQ SIYKNNDREIKHLGCKRFGVQFLVKGIYSHNGLFYFHTQTKNSSNVPFDTDFIRFKIVDKKVAKRTAIQETVIDPVRSYN EILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRHQTIRVENSDVVAAKVINELKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34313; Mature: 34313
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIIMFALLLGVVSMKAQSNDLYQGITKKLPYRQMVTPYGVQVTFAKTVHIIFPSAVK CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCCCEEEEEEEEEEEEECCCEE YVDLGSNYIIAGKADGAENVVRVKATTEGFPGETNFSVICEDGSFYSFNAKYAHEPEMLN EEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCCCCCEEE IEMKDFLENEDTTDFSHTRMNIYFRELGNESPLLVKLIMQSIYKNNDREIKHLGCKRFGV EEHHHHCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH QFLVKGIYSHNGLFYFHTQTKNSSNVPFDTDFIRFKIVDKKVAKRTAIQETVIDPVRSYN HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCC EILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRHQTIRVENSDVVAAKVINELK EEEEECCCCEEEEEEECCCEECCCCCEEEEEEEECCCCCEEEEEEECCCEEHHHHHHHHC IK CC >Mature Secondary Structure MKKLIIMFALLLGVVSMKAQSNDLYQGITKKLPYRQMVTPYGVQVTFAKTVHIIFPSAVK CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCCCEEEEEEEEEEEEECCCEE YVDLGSNYIIAGKADGAENVVRVKATTEGFPGETNFSVICEDGSFYSFNAKYAHEPEMLN EEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCCCCCEEE IEMKDFLENEDTTDFSHTRMNIYFRELGNESPLLVKLIMQSIYKNNDREIKHLGCKRFGV EEHHHHCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH QFLVKGIYSHNGLFYFHTQTKNSSNVPFDTDFIRFKIVDKKVAKRTAIQETVIDPVRSYN HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCC EILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRHQTIRVENSDVVAAKVINELK EEEEECCCCEEEEEEECCCEECCCCCEEEEEEEECCCCCEEEEEEECCCEEHHHHHHHHC IK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA