Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345481

Identifier: 29345481

GI number: 29345481

Start: 68637

End: 69134

Strand: Reverse

Name: 29345481

Synonym: BT_0071

Alternate gene names: NA

Gene position: 69134-68637 (Counterclockwise)

Preceding gene: 29345482

Following gene: 29345480

Centisome position: 1.1

GC content: 51.41

Gene sequence:

>498_bases
ATGATACGCCGCCTCCCGATGACGGACAGCCGCGGTATGAATTCCGATAAATACGGTATTCCAAATATCCATATCCGAAC
CACGCCTGGCCCGGATATGGATAAGCAAACAAAACAAACAAATGATAGCGGATTTAATTCGTACAGCCGGAAATACCACA
TTCCACGGCTGTGGTATGAACCCGCCAGGGGTATATATTGTTCTGACAGTGTGTCGTATTCATGGTTCATACAGTTCCTA
CAGGGCGGAATTGTCCATGTCTTGTGCCGCACTTCCCTGTTGTCAATATCCCGGATTTTGCGTAAGCGCGGGCAAAAGGT
TTATTTCGGATTGCGGAAAAGGCATGAGAAGCTCGTAGGCTTCGCATCCGGCCACGGCCTGTGCCTGCCCGGTCCGTTTC
AACATGATCCAATAGCCCCAGTCTTGCTTCCGCGTTTTCCATTCGTCCGGCAGGGCCGACTTGTCCGCAGTGTCCTCCAT
ACCGGCCTCTTTGAGTAG

Upstream 100 bases:

>100_bases
GCTATGCGTGCAGTCCGACTGCCATATCAAACTGGTTGGATGTTGAGATGAAATTATGGCACGCATGCCCGCTTCCCTTC
GTATATAATTCCTTATCCGG

Downstream 100 bases:

>100_bases
CAGGGCGGTTTTCGCGGGTGTATAGTTCGCAAGGCTTTCACCGAAAACGCGGTACATTTCGGGCTCGGACGATTCCTCGA
CCGCAATGCTGAAATCGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MIRRLPMTDSRGMNSDKYGIPNIHIRTTPGPDMDKQTKQTNDSGFNSYSRKYHIPRLWYEPARGIYCSDSVSYSWFIQFL
QGGIVHVLCRTSLLSISRILRKRGQKVYFGLRKRHEKLVGFASGHGLCLPGPFQHDPIAPVLLPRFPFVRQGRLVRSVLH
TGLFE

Sequences:

>Translated_165_residues
MIRRLPMTDSRGMNSDKYGIPNIHIRTTPGPDMDKQTKQTNDSGFNSYSRKYHIPRLWYEPARGIYCSDSVSYSWFIQFL
QGGIVHVLCRTSLLSISRILRKRGQKVYFGLRKRHEKLVGFASGHGLCLPGPFQHDPIAPVLLPRFPFVRQGRLVRSVLH
TGLFE
>Mature_165_residues
MIRRLPMTDSRGMNSDKYGIPNIHIRTTPGPDMDKQTKQTNDSGFNSYSRKYHIPRLWYEPARGIYCSDSVSYSWFIQFL
QGGIVHVLCRTSLLSISRILRKRGQKVYFGLRKRHEKLVGFASGHGLCLPGPFQHDPIAPVLLPRFPFVRQGRLVRSVLH
TGLFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18987; Mature: 18987

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRLPMTDSRGMNSDKYGIPNIHIRTTPGPDMDKQTKQTNDSGFNSYSRKYHIPRLWYE
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCEECCCHHEEC
PARGIYCSDSVSYSWFIQFLQGGIVHVLCRTSLLSISRILRKRGQKVYFGLRKRHEKLVG
CCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHE
FASGHGLCLPGPFQHDPIAPVLLPRFPFVRQGRLVRSVLHTGLFE
ECCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIRRLPMTDSRGMNSDKYGIPNIHIRTTPGPDMDKQTKQTNDSGFNSYSRKYHIPRLWYE
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCEECCCHHEEC
PARGIYCSDSVSYSWFIQFLQGGIVHVLCRTSLLSISRILRKRGQKVYFGLRKRHEKLVG
CCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHE
FASGHGLCLPGPFQHDPIAPVLLPRFPFVRQGRLVRSVLHTGLFE
ECCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA