| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345434
Identifier: 29345434
GI number: 29345434
Start: 19976
End: 20512
Strand: Reverse
Name: 29345434
Synonym: BT_0024
Alternate gene names: NA
Gene position: 20512-19976 (Counterclockwise)
Preceding gene: 29345435
Following gene: 29345433
Centisome position: 0.33
GC content: 43.39
Gene sequence:
>537_bases TTGGCGGAGGGGGTAGCAGACCGTATCATCGGACTTTATTCCCTTGGTAACAGCACACGTGAGATCAGTGACTGGCTAAA GGAAAATCTCGGCAACCGTGTTTCTGACGAAACGATTAGTTCAATAACCGATCGTGTTCTTCCTGAAATAAAGGTTTGGC GTTCCCGTATCCTTGATGATGTTTATTCGATAGTCTGGATAAACGCTATCCATTATAAAGTCACTGACGAGAGAGGGTGT ACCGTTACCCGCGCAATCTACAACGTCTTAGGCATAGACAAGGAAGGCCACAAGGATTTGCTTGGAATGTATATCTCTAA AAATGAGGGAGCAAATTTCTGGTTAAACGTACTGACGGATTTGCAGAACCGTGGAGTTCATGATATCCTTATTGCGTACG TTGATGGCCTGAAAGGCTGGATGCCACCCAAAGTGTTTTTCCGAACACAATATTACAACTTTGTATCGTCTACCAGATAC GGAACTCCATTAAATATGTCGGTAGTAAGCATCAGAAGGAATTCCTCAAAAACTTGA
Upstream 100 bases:
>100_bases GAAGCAAGTCCAGACTCCATTAGGTGAGATCACTGTGTCTACCCCTCGTGACCGTAATTCAGGTTTTGAGCCTTAGTATA TAAAGAAGCGTGAGGCCATC
Downstream 100 bases:
>100_bases AACGGGTTTATGGTGCAGTACATAAATAAGCTACTGAAACAGAGTTTTTTTAATCTGAATGAGAAATGGGAAGAAAAATA TCCTATCGTCATCAAGTCAT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MAEGVADRIIGLYSLGNSTREISDWLKENLGNRVSDETISSITDRVLPEIKVWRSRILDDVYSIVWINAIHYKVTDERGC TVTRAIYNVLGIDKEGHKDLLGMYISKNEGANFWLNVLTDLQNRGVHDILIAYVDGLKGWMPPKVFFRTQYYNFVSSTRY GTPLNMSVVSIRRNSSKT
Sequences:
>Translated_178_residues MAEGVADRIIGLYSLGNSTREISDWLKENLGNRVSDETISSITDRVLPEIKVWRSRILDDVYSIVWINAIHYKVTDERGC TVTRAIYNVLGIDKEGHKDLLGMYISKNEGANFWLNVLTDLQNRGVHDILIAYVDGLKGWMPPKVFFRTQYYNFVSSTRY GTPLNMSVVSIRRNSSKT >Mature_177_residues AEGVADRIIGLYSLGNSTREISDWLKENLGNRVSDETISSITDRVLPEIKVWRSRILDDVYSIVWINAIHYKVTDERGCT VTRAIYNVLGIDKEGHKDLLGMYISKNEGANFWLNVLTDLQNRGVHDILIAYVDGLKGWMPPKVFFRTQYYNFVSSTRYG TPLNMSVVSIRRNSSKT
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 20338; Mature: 20207
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEGVADRIIGLYSLGNSTREISDWLKENLGNRVSDETISSITDRVLPEIKVWRSRILDD CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VYSIVWINAIHYKVTDERGCTVTRAIYNVLGIDKEGHKDLLGMYISKNEGANFWLNVLTD HHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH LQNRGVHDILIAYVDGLKGWMPPKVFFRTQYYNFVSSTRYGTPLNMSVVSIRRNSSKT HHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure AEGVADRIIGLYSLGNSTREISDWLKENLGNRVSDETISSITDRVLPEIKVWRSRILDD CCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VYSIVWINAIHYKVTDERGCTVTRAIYNVLGIDKEGHKDLLGMYISKNEGANFWLNVLTD HHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH LQNRGVHDILIAYVDGLKGWMPPKVFFRTQYYNFVSSTRYGTPLNMSVVSIRRNSSKT HHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]