| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is yjhP [H]
Identifier: 29144786
GI number: 29144786
Start: 4702025
End: 4703653
Strand: Reverse
Name: yjhP [H]
Synonym: t4550
Alternate gene names: 29144786
Gene position: 4703653-4702025 (Counterclockwise)
Preceding gene: 29144787
Following gene: 161486766
Centisome position: 98.16
GC content: 54.76
Gene sequence:
>1629_bases ATGATGGATATCAGCGCCGTTATTTTTGCAACGCATCGCATTCGGCTATTACCCGATGAAGGCAAAATCCCCTGGGACGA GCCAGCCTTCAGCCAACGCATGCTGGAAAATCATCTGTCACAGGATCACGACTGGGCCAGCCGCCGGCTAACCGTGATTG AGCAACAGGTAACATGGATTACCCGTCAGTTACCCGCAGGCGCCCGCATTCTGGATCTCGGCTGTGGCCCCGGTTTTTAT ACCCGCCTGTTAGCAGAGCGTGGGTTTCACTGCACAGGCGTAGATTTCTCTCCGGCATCCATCACATGGGCTCGCCAGCA GGCGCAAGCCGCAAACCTGAATATTGACTACATTCAGCAGGATATTCGTACATACCACCCCACGGAACCCTTTGATTTCA TTATGATGACGTTTGGGGAACTGAATGTCTTTAGCGCTGCTGATGCGCAAAGCCTCATCAGTCATTGCGCGCAGTGGTTG AAACCGGACGGCAAACTGCTTGTTGAAGTGCATACCTTCGATGAAGTTAAACGCCAGGGCATGGCGCAGCCAGGCTGGCA GCGTTGTCCGCACGGCCTGTTTCTTGCCGTGCCTCATCTGCTGTTAACGGAAAATGCCTGGGATGAAGAGGCCCAAACCA GCTCAACGCAGTTCTGGGCGATAGCGGAAAACGGCTGTACCACCCGTTTCGGCAGTCAAATGAAGGCCTGGCGCGATGAT GAATATATCAGCCTGCTTGGTGATGCTGGCTTCACTGTGTTGCAGCGCCCGGACAGTCACACCTGGCCGGTCGGCGAGAC TTTTGCAGGCAAGCTGTTTGCGCTGCTGGCTGAAAAAGCATCCACTTCTGAGGGTATTGCCCTCAGTAAAAGGAATAACC CAATGGATATCCCACGTATTTTTACCATTAGCGAAAGCGAACACCGTATCCATAATCCGTTTACAGCGGAAAAGTACGCC ACGCTGGGCCATGCGTTACGCATGAAACCAGGCATGCGGATTCTCGATCTCGGTAGCGGTTCGGGTGAGATGCTCTGCAC CTGGGCTCGCGATTACGGTGTTACAGGTACTGGCATTGACATAAGCCCGCTCTTCACCACACAGGCAAAACAACGTGCAG AAGAGCTCGGCGTCAGTGAATACGTACATTTTATTCATAACGACGCGGCCGGTTATATCGACGAGGAAAAATATGACGTG GCGGCCTGCGTAGGCGCTACCTGGATTGCGGGCGGTGTCGCGGGGACAATAGATCTGCTGGCCAAAAGCCTCAAACCTGG CGGGATCATTCTCATCGGTAAACCGTACTGGCGTCAGATCCCCGCAACGGAAGAGATCGCCCACGCCTGTGGCGTCTCAT CCGTCGCCGATTTTCGCCCCCTGCCCGAGCTGGTCGCCTTTTTCGACCAACTCGGCTATGACGTAGTGGAAATGGTGCTG GCGGACCCGCAAGGCTGGGACAGATATGAAGCCGCTAAGTGGATGACCATGCGCCGCTGGCTGGAGGAAAACCCTGACGA TGAGTTTGCGCAAGAGGTTCGAACAGAACTGACGGCAGCCCCCAAACGTCACGTCACCTGGACGCGAGAATACTTTGGCT GGGGCGTATTTGCGTTAATCGCGCGATAA
Upstream 100 bases:
>100_bases ACCAAAAAGCTGATCAAATCCGTTAACGGTCAGCCCTACCGCATTAATACAACCGGGCTGAACAACGTTCGCGCCCAGCC TGACAATCGCTAAGGAGATG
Downstream 100 bases:
>100_bases CGTGAAGCAGGAGGTATACCCTACAAGAGGTATACCTCCATTTAAAAGTATTCAACAAATTAACACGGCTCAAGGCGGGA ATATATCGTCTTAATTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MMDISAVIFATHRIRLLPDEGKIPWDEPAFSQRMLENHLSQDHDWASRRLTVIEQQVTWITRQLPAGARILDLGCGPGFY TRLLAERGFHCTGVDFSPASITWARQQAQAANLNIDYIQQDIRTYHPTEPFDFIMMTFGELNVFSAADAQSLISHCAQWL KPDGKLLVEVHTFDEVKRQGMAQPGWQRCPHGLFLAVPHLLLTENAWDEEAQTSSTQFWAIAENGCTTRFGSQMKAWRDD EYISLLGDAGFTVLQRPDSHTWPVGETFAGKLFALLAEKASTSEGIALSKRNNPMDIPRIFTISESEHRIHNPFTAEKYA TLGHALRMKPGMRILDLGSGSGEMLCTWARDYGVTGTGIDISPLFTTQAKQRAEELGVSEYVHFIHNDAAGYIDEEKYDV AACVGATWIAGGVAGTIDLLAKSLKPGGIILIGKPYWRQIPATEEIAHACGVSSVADFRPLPELVAFFDQLGYDVVEMVL ADPQGWDRYEAAKWMTMRRWLEENPDDEFAQEVRTELTAAPKRHVTWTREYFGWGVFALIAR
Sequences:
>Translated_542_residues MMDISAVIFATHRIRLLPDEGKIPWDEPAFSQRMLENHLSQDHDWASRRLTVIEQQVTWITRQLPAGARILDLGCGPGFY TRLLAERGFHCTGVDFSPASITWARQQAQAANLNIDYIQQDIRTYHPTEPFDFIMMTFGELNVFSAADAQSLISHCAQWL KPDGKLLVEVHTFDEVKRQGMAQPGWQRCPHGLFLAVPHLLLTENAWDEEAQTSSTQFWAIAENGCTTRFGSQMKAWRDD EYISLLGDAGFTVLQRPDSHTWPVGETFAGKLFALLAEKASTSEGIALSKRNNPMDIPRIFTISESEHRIHNPFTAEKYA TLGHALRMKPGMRILDLGSGSGEMLCTWARDYGVTGTGIDISPLFTTQAKQRAEELGVSEYVHFIHNDAAGYIDEEKYDV AACVGATWIAGGVAGTIDLLAKSLKPGGIILIGKPYWRQIPATEEIAHACGVSSVADFRPLPELVAFFDQLGYDVVEMVL ADPQGWDRYEAAKWMTMRRWLEENPDDEFAQEVRTELTAAPKRHVTWTREYFGWGVFALIAR >Mature_542_residues MMDISAVIFATHRIRLLPDEGKIPWDEPAFSQRMLENHLSQDHDWASRRLTVIEQQVTWITRQLPAGARILDLGCGPGFY TRLLAERGFHCTGVDFSPASITWARQQAQAANLNIDYIQQDIRTYHPTEPFDFIMMTFGELNVFSAADAQSLISHCAQWL KPDGKLLVEVHTFDEVKRQGMAQPGWQRCPHGLFLAVPHLLLTENAWDEEAQTSSTQFWAIAENGCTTRFGSQMKAWRDD EYISLLGDAGFTVLQRPDSHTWPVGETFAGKLFALLAEKASTSEGIALSKRNNPMDIPRIFTISESEHRIHNPFTAEKYA TLGHALRMKPGMRILDLGSGSGEMLCTWARDYGVTGTGIDISPLFTTQAKQRAEELGVSEYVHFIHNDAAGYIDEEKYDV AACVGATWIAGGVAGTIDLLAKSLKPGGIILIGKPYWRQIPATEEIAHACGVSSVADFRPLPELVAFFDQLGYDVVEMVL ADPQGWDRYEAAKWMTMRRWLEENPDDEFAQEVRTELTAAPKRHVTWTREYFGWGVFALIAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790760, Length=248, Percent_Identity=81.8548387096774, Blast_Score=424, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR017031 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 60885; Mature: 60885
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDISAVIFATHRIRLLPDEGKIPWDEPAFSQRMLENHLSQDHDWASRRLTVIEQQVTWI CCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH TRQLPAGARILDLGCGPGFYTRLLAERGFHCTGVDFSPASITWARQQAQAANLNIDYIQQ HHHCCCCCEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHH DIRTYHPTEPFDFIMMTFGELNVFSAADAQSLISHCAQWLKPDGKLLVEVHTFDEVKRQG HHHHCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCC MAQPGWQRCPHGLFLAVPHLLLTENAWDEEAQTSSTQFWAIAENGCTTRFGSQMKAWRDD CCCCCHHHCCCCHHHHHHHHHHCCCCCCCHHCCCCCEEEEEECCCCCCHHCHHHHHCCCC EYISLLGDAGFTVLQRPDSHTWPVGETFAGKLFALLAEKASTSEGIALSKRNNPMDIPRI CHHEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEE FTISESEHRIHNPFTAEKYATLGHALRMKPGMRILDLGSGSGEMLCTWARDYGVTGTGID EEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCC ISPLFTTQAKQRAEELGVSEYVHFIHNDAAGYIDEEKYDVAACVGATWIAGGVAGTIDLL CCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH AKSLKPGGIILIGKPYWRQIPATEEIAHACGVSSVADFRPLPELVAFFDQLGYDVVEMVL HHHCCCCCEEEECCHHHHCCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCHHHHHHHH ADPQGWDRYEAAKWMTMRRWLEENPDDEFAQEVRTELTAAPKRHVTWTREYFGWGVFALI CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHCCCHHHHC AR CC >Mature Secondary Structure MMDISAVIFATHRIRLLPDEGKIPWDEPAFSQRMLENHLSQDHDWASRRLTVIEQQVTWI CCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH TRQLPAGARILDLGCGPGFYTRLLAERGFHCTGVDFSPASITWARQQAQAANLNIDYIQQ HHHCCCCCEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHH DIRTYHPTEPFDFIMMTFGELNVFSAADAQSLISHCAQWLKPDGKLLVEVHTFDEVKRQG HHHHCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCC MAQPGWQRCPHGLFLAVPHLLLTENAWDEEAQTSSTQFWAIAENGCTTRFGSQMKAWRDD CCCCCHHHCCCCHHHHHHHHHHCCCCCCCHHCCCCCEEEEEECCCCCCHHCHHHHHCCCC EYISLLGDAGFTVLQRPDSHTWPVGETFAGKLFALLAEKASTSEGIALSKRNNPMDIPRI CHHEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEE FTISESEHRIHNPFTAEKYATLGHALRMKPGMRILDLGSGSGEMLCTWARDYGVTGTGID EEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCC ISPLFTTQAKQRAEELGVSEYVHFIHNDAAGYIDEEKYDVAACVGATWIAGGVAGTIDLL CCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH AKSLKPGGIILIGKPYWRQIPATEEIAHACGVSSVADFRPLPELVAFFDQLGYDVVEMVL HHHCCCCCEEEECCHHHHCCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCHHHHHHHH ADPQGWDRYEAAKWMTMRRWLEENPDDEFAQEVRTELTAAPKRHVTWTREYFGWGVFALI CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHCCCHHHHC AR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]