Click here to switch to the map view.

The map label for this gene is 29144767

Identifier: 29144767

GI number: 29144767

Start: 4672455

End: 4673315

Strand: Reverse

Name: 29144767

Synonym: t4524

Alternate gene names: NA

Gene position: 4673315-4672455 (Counterclockwise)

Preceding gene: 29144779

Following gene: 29144766

Centisome position: 97.52

GC content: 54.82

Gene sequence:

>861_bases
GTGGCCAGCCGGTTTTTAAGGTCTGTTTGTGCCAGCACTCTGACAACGGCAATGAATCGTGTTGTTGTGCAGGAGGCGTC
AGAATCATTTCAGGTTGAACACACGGAGAGCCTGAACATGAAACCCGAACTCATTATCAAATCCATGCAGACCGTTATCA
GTAAACAGGATGAAGGCGCGGAACAACGCATTGCCGGTGCGCTGGTCGCACTTAACGAAGCAAAAGACGCACACACGGCC
AGCATGGGTAAACTCAGCGACATTGAGGCTTCCATTCAGCGTTGTGAGCAGGAACGACAGACCGCCCTCAGTGAAAGTGC
ACAGGCCGAACAGGACTGGCGCAGCCGCTTTCGAACTCTGCGCGGCAACCTCACTCCTGAACTGAAAGCTGAACACAGTA
AACGTATCGCCAGCCGCGAACTGGCTGATGAGTTCACCGGTCTGATTACCGAGCTGGAGAAAGACAAAAGCCTCGCCATG
CTTGGTGCATGCTCCTCCGGTACGGCTTATATCAGCGCCCATGAAAAAGCGTTCACTACCTACGCCAACAGCGAGTGGAA
GAAGGCGTTAGCCGGTATCAGCCCCGCACTGTTACGTGCCTTTCTGTTGCGTATTCGGTCGCTGGAAATGAGCGGAGAAA
CCTCGCTGCGTGCGACCGTGACCCGTGAGCTGGGTGATGCCCTGAATATGCAGTCAGCCCTGTATCATTTTGATATGGAG
CAGGAGCCGGTTCTGTCCGTAACGGGCATGAATCGCCCGGTCATAACCGGGGTTGATATGGCGCTGTTAAGAAGCCCGGC
CAGACGGATGAAGCTTGCCGCTGAACTGGCCGCAAAAGACCACGAACAGGCAGAGGGCTGA

Upstream 100 bases:

>100_bases
TAACTCACTGTATTACTTATCTTTTTATTTAAGGTGAACAGTGGTGAATAGTTATTAGTAAAAAAACAAACGGTGAGTCA
GGTTTTCCTGAGACCTTTCT

Downstream 100 bases:

>100_bases
ATTATGTTTCACTGTCCGTTCTGCAAAAAGACCGCGCACGTCCGTACCAGCCGGTATCTGTCGGAAAACGTCAAACAGCG
TTATCACCAGTGTACCAATA

Product: phage capsid protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MASRFLRSVCASTLTTAMNRVVVQEASESFQVEHTESLNMKPELIIKSMQTVISKQDEGAEQRIAGALVALNEAKDAHTA
SMGKLSDIEASIQRCEQERQTALSESAQAEQDWRSRFRTLRGNLTPELKAEHSKRIASRELADEFTGLITELEKDKSLAM
LGACSSGTAYISAHEKAFTTYANSEWKKALAGISPALLRAFLLRIRSLEMSGETSLRATVTRELGDALNMQSALYHFDME
QEPVLSVTGMNRPVITGVDMALLRSPARRMKLAAELAAKDHEQAEG

Sequences:

>Translated_286_residues
MASRFLRSVCASTLTTAMNRVVVQEASESFQVEHTESLNMKPELIIKSMQTVISKQDEGAEQRIAGALVALNEAKDAHTA
SMGKLSDIEASIQRCEQERQTALSESAQAEQDWRSRFRTLRGNLTPELKAEHSKRIASRELADEFTGLITELEKDKSLAM
LGACSSGTAYISAHEKAFTTYANSEWKKALAGISPALLRAFLLRIRSLEMSGETSLRATVTRELGDALNMQSALYHFDME
QEPVLSVTGMNRPVITGVDMALLRSPARRMKLAAELAAKDHEQAEG
>Mature_285_residues
ASRFLRSVCASTLTTAMNRVVVQEASESFQVEHTESLNMKPELIIKSMQTVISKQDEGAEQRIAGALVALNEAKDAHTAS
MGKLSDIEASIQRCEQERQTALSESAQAEQDWRSRFRTLRGNLTPELKAEHSKRIASRELADEFTGLITELEKDKSLAML
GACSSGTAYISAHEKAFTTYANSEWKKALAGISPALLRAFLLRIRSLEMSGETSLRATVTRELGDALNMQSALYHFDMEQ
EPVLSVTGMNRPVITGVDMALLRSPARRMKLAAELAAKDHEQAEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31491; Mature: 31360

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRFLRSVCASTLTTAMNRVVVQEASESFQVEHTESLNMKPELIIKSMQTVISKQDEGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCH
EQRIAGALVALNEAKDAHTASMGKLSDIEASIQRCEQERQTALSESAQAEQDWRSRFRTL
HHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGNLTPELKAEHSKRIASRELADEFTGLITELEKDKSLAMLGACSSGTAYISAHEKAFTT
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEHHHHHHH
YANSEWKKALAGISPALLRAFLLRIRSLEMSGETSLRATVTRELGDALNMQSALYHFDME
HCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
QEPVLSVTGMNRPVITGVDMALLRSPARRMKLAAELAAKDHEQAEG
CCCEEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCHHCCCC
>Mature Secondary Structure 
ASRFLRSVCASTLTTAMNRVVVQEASESFQVEHTESLNMKPELIIKSMQTVISKQDEGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCH
EQRIAGALVALNEAKDAHTASMGKLSDIEASIQRCEQERQTALSESAQAEQDWRSRFRTL
HHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGNLTPELKAEHSKRIASRELADEFTGLITELEKDKSLAMLGACSSGTAYISAHEKAFTT
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEHHHHHHH
YANSEWKKALAGISPALLRAFLLRIRSLEMSGETSLRATVTRELGDALNMQSALYHFDME
HCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
QEPVLSVTGMNRPVITGVDMALLRSPARRMKLAAELAAKDHEQAEG
CCCEEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA