Click here to switch to the map view.

The map label for this gene is yiaL [H]

Identifier: 29144128

GI number: 29144128

Start: 3976479

End: 3976943

Strand: Reverse

Name: yiaL [H]

Synonym: t3850

Alternate gene names: 29144128

Gene position: 3976943-3976479 (Counterclockwise)

Preceding gene: 29144129

Following gene: 29144127

Centisome position: 82.99

GC content: 45.16

Gene sequence:

>465_bases
ATGATTTTTGGACATATCGCGCAGCCAAATCCATGTCATTTGCCAGCCGCGATCGAGAAAGCGCTTCACTTTTTACGTAC
CACCGACTTTCGCACGCTGGAACCCGGCGTAGTGGAAATCGACGGCAAAAATACCTTCGCGCAGATTATCGATATGACCA
CCCGCGATGCTGCTGAAAATCGTCCGGAAGTCCATCGCCGCTATCTGGATATTCAGTTTCTGGCATGGGGTGAAGAGAAA
ATTGGGGTTGCCATTGATACCGGTAATAATCAAATCAGCGAGTCATTATTAGAACAGCGCGATATTATTTTTTATCACGA
CAGTGAACATGAATCATTCATTGAAATGATACCGGGAAGTTATGCCCTGTTTTTCCCGCAGGATGTTCATCGTCCCGGTT
GTAATAAAAGCATTGCTACGCCGATACGGAAAATAGTCGTAAAAGTCGCCATAGACGTTTTATAA

Upstream 100 bases:

>100_bases
GCCACGAATTTACCAAATTGCTGGATGACAGCCGCTGTAACGGTATCACCATTGACGACAGCGTCTGGGCTAAAATCCAG
GCGCTGTAAGGAGCCACATC

Downstream 100 bases:

>100_bases
AATAGAGTTTACTGGAGCACAAAATGAAAAATAATACCGGTTATATTATCGGTGCGTACCCTTGTGCACCCTCATTTCAC
CAGAAGAGTGAAGAGGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIFGHIAQPNPCHLPAAIEKALHFLRTTDFRTLEPGVVEIDGKNTFAQIIDMTTRDAAENRPEVHRRYLDIQFLAWGEEK
IGVAIDTGNNQISESLLEQRDIIFYHDSEHESFIEMIPGSYALFFPQDVHRPGCNKSIATPIRKIVVKVAIDVL

Sequences:

>Translated_154_residues
MIFGHIAQPNPCHLPAAIEKALHFLRTTDFRTLEPGVVEIDGKNTFAQIIDMTTRDAAENRPEVHRRYLDIQFLAWGEEK
IGVAIDTGNNQISESLLEQRDIIFYHDSEHESFIEMIPGSYALFFPQDVHRPGCNKSIATPIRKIVVKVAIDVL
>Mature_154_residues
MIFGHIAQPNPCHLPAAIEKALHFLRTTDFRTLEPGVVEIDGKNTFAQIIDMTTRDAAENRPEVHRRYLDIQFLAWGEEK
IGVAIDTGNNQISESLLEQRDIIFYHDSEHESFIEMIPGSYALFFPQDVHRPGCNKSIATPIRKIVVKVAIDVL

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yhcH/yiaL/yjgK family [H]

Homologues:

Organism=Escherichia coli, GI1790001, Length=154, Percent_Identity=82.4675324675325, Blast_Score=272, Evalue=8e-75,
Organism=Escherichia coli, GI1789615, Length=134, Percent_Identity=29.1044776119403, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI87082398, Length=149, Percent_Identity=28.1879194630872, Blast_Score=63, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004375 [H]

Pfam domain/function: PF04074 DUF386 [H]

EC number: NA

Molecular weight: Translated: 17482; Mature: 17482

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFGHIAQPNPCHLPAAIEKALHFLRTTDFRTLEPGVVEIDGKNTFAQIIDMTTRDAAEN
CEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCC
RPEVHRRYLDIQFLAWGEEKIGVAIDTGNNQISESLLEQRDIIFYHDSEHESFIEMIPGS
CHHHHHHHHEEEEEEECCCEEEEEEECCCCHHHHHHHHHCCEEEEECCCCHHHHHHCCCC
YALFFPQDVHRPGCNKSIATPIRKIVVKVAIDVL
EEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIFGHIAQPNPCHLPAAIEKALHFLRTTDFRTLEPGVVEIDGKNTFAQIIDMTTRDAAEN
CEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCC
RPEVHRRYLDIQFLAWGEEKIGVAIDTGNNQISESLLEQRDIIFYHDSEHESFIEMIPGS
CHHHHHHHHEEEEEEECCCEEEEEEECCCCHHHHHHHHHCCEEEEECCCCHHHHHHCCCC
YALFFPQDVHRPGCNKSIATPIRKIVVKVAIDVL
EEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]