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The map label for this gene is yiaM [H]

Identifier: 29144126

GI number: 29144126

Start: 3974911

End: 3975384

Strand: Reverse

Name: yiaM [H]

Synonym: t3848

Alternate gene names: 29144126

Gene position: 3975384-3974911 (Counterclockwise)

Preceding gene: 29144127

Following gene: 29144125

Centisome position: 82.96

GC content: 46.41

Gene sequence:

>474_bases
ATGAAGCGGGTACTTGAGGGCATACTTGCGGTATTAATTGCCGTACTTTCCTGCATTGTATTTATTAACGTTATTTTACG
TTACGGTTTTGAGAGCAGTATTTTGTCGGTAGATGAACTATCACGTTATCTATTTGTATGGCTGACGTTTATTGGCGCCA
TCGTTGCATTTATGGATAACGCTCACGTTCAGGTCACTTTTGTGGTGGAAAAACTTTCGCCAGCGAATCAGCGTCGACTC
TCGCTGCTGACACATTCGCTGATTTTATTGTTATGCATCGCATTAGGCTGGGGCAGCCTGCAAAAAGCGTTGCAGGACTG
GAGCGATCACTCGCCAATCCTCGGTTTACCGATCGGCCTGATGTATATCGCCTGTCTGCCCACAAGCGTTGCCATCGCGT
TAATCGAGCTGCGTCGGCTTTATCACTTAATAACGCGTAACGATTCCTTTCAACAACCACAGCAAGGAGCCTAA

Upstream 100 bases:

>100_bases
ACTCAACGTTGCGCCGACCTAATATAAACCAAACATAAGAAATTAAGTTCCACTATTCAGCATCGAAAGAAATAAGTTTC
TATAACCTGATGGAGTCGTT

Downstream 100 bases:

>100_bases
TCATGGCCGTGGTGATATTTCTCTGCTGCCTGCTCGGCGGGATCGCGATAGGTTTACCCATCGCCTGGTCGCTGCTGCTT
TGCGGCGCTGCTCTGATGGC

Product: 2,3-diketo-L-gulonate TRAP transporter small permease YiaM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKRVLEGILAVLIAVLSCIVFINVILRYGFESSILSVDELSRYLFVWLTFIGAIVAFMDNAHVQVTFVVEKLSPANQRRL
SLLTHSLILLLCIALGWGSLQKALQDWSDHSPILGLPIGLMYIACLPTSVAIALIELRRLYHLITRNDSFQQPQQGA

Sequences:

>Translated_157_residues
MKRVLEGILAVLIAVLSCIVFINVILRYGFESSILSVDELSRYLFVWLTFIGAIVAFMDNAHVQVTFVVEKLSPANQRRL
SLLTHSLILLLCIALGWGSLQKALQDWSDHSPILGLPIGLMYIACLPTSVAIALIELRRLYHLITRNDSFQQPQQGA
>Mature_157_residues
MKRVLEGILAVLIAVLSCIVFINVILRYGFESSILSVDELSRYLFVWLTFIGAIVAFMDNAHVQVTFVVEKLSPANQRRL
SLLTHSLILLLCIALGWGSLQKALQDWSDHSPILGLPIGLMYIACLPTSVAIALIELRRLYHLITRNDSFQQPQQGA

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system yiaMNO involved in the uptake of 2,3- diketo-L-gulonate [H]

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter small permease family [H]

Homologues:

Organism=Escherichia coli, GI1790002, Length=157, Percent_Identity=76.4331210191083, Blast_Score=251, Evalue=2e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007387 [H]

Pfam domain/function: PF04290 DctQ [H]

EC number: NA

Molecular weight: Translated: 17548; Mature: 17548

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVLEGILAVLIAVLSCIVFINVILRYGFESSILSVDELSRYLFVWLTFIGAIVAFMDN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AHVQVTFVVEKLSPANQRRLSLLTHSLILLLCIALGWGSLQKALQDWSDHSPILGLPIGL
CCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHH
MYIACLPTSVAIALIELRRLYHLITRNDSFQQPQQGA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKRVLEGILAVLIAVLSCIVFINVILRYGFESSILSVDELSRYLFVWLTFIGAIVAFMDN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AHVQVTFVVEKLSPANQRRLSLLTHSLILLLCIALGWGSLQKALQDWSDHSPILGLPIGL
CCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHH
MYIACLPTSVAIALIELRRLYHLITRNDSFQQPQQGA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]