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The map label for this gene is yibQ [H]

Identifier: 29144093

GI number: 29144093

Start: 3933269

End: 3934231

Strand: Reverse

Name: yibQ [H]

Synonym: t3813

Alternate gene names: 29144093

Gene position: 3934231-3933269 (Counterclockwise)

Preceding gene: 29144094

Following gene: 29144089

Centisome position: 82.1

GC content: 55.35

Gene sequence:

>963_bases
TTGCCTCAGTTTCGTCGCTCCATTCTCACGCTGGCCACTTTGCTGGCATTTGCACATCCCGTTTTCGCTGGCAAGCTCGC
CATCGTGATTGATGATTTTGGCTATCGCCCGCACACGGAAAACCAGGTTCTGGCGCTGCCGCCAAACATCTCCGTCGCTG
TACTGCCCAACGCGCCGCACGCGCGCGAAATGGCGACTAAAGCGCACAATAGCGGGCATGAGGTGTTAATCCATCTGCCG
ATGGCGCCGCTAAGCAAACAGCCGCTGGAGAAGGATACGCTGCGACCAGATATGAGCAGCGATGAGATCGAGCGCATTAT
CCGCGAGGCGGTAAACAACGTGCCGTATGCCGTTGGGCTTAATAACCACATGGGCAGCGCAATGACTTCCAGCCTGTTCG
GTATGCAAAAAGTTATGCAGGCGCTGGAACATTACAATCTCTATTTTCTCGACAGCATGACGATTGGCAATAGCCAGGCG
ATGCGCGCGGCATCCGGTACGGGTGTGAAAGTGATCAAGCGCAAAGTGTTCCTCGACGATACGCAAAACGAGGCGGATAT
CCGTCGTCAGTTTAATCGCACTATCGAACTGGCCCGTCGCAACGGTTCCGCTATCGCGATTGGTCATCCGCATCCCGCAA
CGGTTCGCGTGCTGCAACAGATGGTTTATCGCCTGCCGGCAGATATCACCCTGGTACGTCCAGGCAGCCTGCTCAACGAA
CCGCAGGTAGATACGTCTCGACCTGATTTGACGCCGCAGAAAATTGACGCGCCGCGCAATCCCTTTCGCGGCGTGAAGAT
GTGCAAGCCGAAAAAACCGCTGCAACCAGTCTACGCTACGCGCTTTTTCAGCGTCATCGGCGAGAGCATTACGCAAAGTT
CCGTGATTGTCTGGTTTCAGCACCAGTGGCAAGGCTGGGGGAAAATCGCCGCGCCTAAAAACATGAGCGCTAAGACAGAT
TGA

Upstream 100 bases:

>100_bases
TGTGGGCAGTAGCGGCGGTCAGGGCAGACCTTCGCTTTATTTCGAAATTCGTCGCCAGGGTCAGGCCGTCAATCCACAGC
CGTGGTTGGGAAGATAAGTT

Downstream 100 bases:

>100_bases
GCGCCTTACGGGCCATACGACGGTGCGACAAGGTTTTGTCGCGCCATTGCCACAGCCGGAAGGACCAGAGCAGCGTCTGA
TAAGCCGCTTTCGCGCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MPQFRRSILTLATLLAFAHPVFAGKLAIVIDDFGYRPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEVLIHLP
MAPLSKQPLEKDTLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLFGMQKVMQALEHYNLYFLDSMTIGNSQA
MRAASGTGVKVIKRKVFLDDTQNEADIRRQFNRTIELARRNGSAIAIGHPHPATVRVLQQMVYRLPADITLVRPGSLLNE
PQVDTSRPDLTPQKIDAPRNPFRGVKMCKPKKPLQPVYATRFFSVIGESITQSSVIVWFQHQWQGWGKIAAPKNMSAKTD

Sequences:

>Translated_320_residues
MPQFRRSILTLATLLAFAHPVFAGKLAIVIDDFGYRPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEVLIHLP
MAPLSKQPLEKDTLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLFGMQKVMQALEHYNLYFLDSMTIGNSQA
MRAASGTGVKVIKRKVFLDDTQNEADIRRQFNRTIELARRNGSAIAIGHPHPATVRVLQQMVYRLPADITLVRPGSLLNE
PQVDTSRPDLTPQKIDAPRNPFRGVKMCKPKKPLQPVYATRFFSVIGESITQSSVIVWFQHQWQGWGKIAAPKNMSAKTD
>Mature_319_residues
PQFRRSILTLATLLAFAHPVFAGKLAIVIDDFGYRPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEVLIHLPM
APLSKQPLEKDTLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLFGMQKVMQALEHYNLYFLDSMTIGNSQAM
RAASGTGVKVIKRKVFLDDTQNEADIRRQFNRTIELARRNGSAIAIGHPHPATVRVLQQMVYRLPADITLVRPGSLLNEP
QVDTSRPDLTPQKIDAPRNPFRGVKMCKPKKPLQPVYATRFFSVIGESITQSSVIVWFQHQWQGWGKIAAPKNMSAKTD

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=307, Percent_Identity=82.0846905537459, Blast_Score=516, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 35667; Mature: 35536

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQFRRSILTLATLLAFAHPVFAGKLAIVIDDFGYRPHTENQVLALPPNISVAVLPNAPH
CCHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCC
AREMATKAHNSGHEVLIHLPMAPLSKQPLEKDTLRPDMSSDEIERIIREAVNNVPYAVGL
HHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCEEEEC
NNHMGSAMTSSLFGMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDD
CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHCCCCCHHHHHHHHHHCC
TQNEADIRRQFNRTIELARRNGSAIAIGHPHPATVRVLQQMVYRLPADITLVRPGSLLNE
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
PQVDTSRPDLTPQKIDAPRNPFRGVKMCKPKKPLQPVYATRFFSVIGESITQSSVIVWFQ
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEE
HQWQGWGKIAAPKNMSAKTD
ECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PQFRRSILTLATLLAFAHPVFAGKLAIVIDDFGYRPHTENQVLALPPNISVAVLPNAPH
CHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCC
AREMATKAHNSGHEVLIHLPMAPLSKQPLEKDTLRPDMSSDEIERIIREAVNNVPYAVGL
HHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCEEEEC
NNHMGSAMTSSLFGMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDD
CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHCCCCCHHHHHHHHHHCC
TQNEADIRRQFNRTIELARRNGSAIAIGHPHPATVRVLQQMVYRLPADITLVRPGSLLNE
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
PQVDTSRPDLTPQKIDAPRNPFRGVKMCKPKKPLQPVYATRFFSVIGESITQSSVIVWFQ
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEE
HQWQGWGKIAAPKNMSAKTD
ECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]