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The map label for this gene is yiiF [H]

Identifier: 29143889

GI number: 29143889

Start: 3689126

End: 3689374

Strand: Reverse

Name: yiiF [H]

Synonym: t3588

Alternate gene names: 29143889

Gene position: 3689374-3689126 (Counterclockwise)

Preceding gene: 29143893

Following gene: 29143888

Centisome position: 76.99

GC content: 49.0

Gene sequence:

>249_bases
GTGAGTATGATGGCTGGGATGGATATGGGCAGAATTTTACTCGATTTATCAGACGATGTGATTAAACGGCTTGACGATCT
CAAGGTGCAACGCAACCTACCTCGTGCAGAACTCTTGCGGGAGGCCGTTGAGCAGTATCTGGAAAGACAGGATCGGGCTG
AGACCACAATTTCGAAAGCATTGGGGCTCTGGCAAGGCTGTGAGGAAGATGGCGTTGAATACCAACGTAAACTTCGTGAG
GAATGGTAA

Upstream 100 bases:

>100_bases
CTCGCAAAAATAAAAATCGTTCGCGTAATAACTATTTTCTCGTCAGTCTCAGGTGTATGTTGTTTGAAAAATAAGCGCGA
ATGATATACTGGAGGTATAT

Downstream 100 bases:

>100_bases
TGGTCAAAGGGTCTGCGCTTTTTGATACCAATATCCTCATCGACCTGTTTAGCGGTCGAATTGAAGCGAAACATGCGCTG
GAAGCGTATCCGCCACAAAA

Product: CopG family DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MSMMAGMDMGRILLDLSDDVIKRLDDLKVQRNLPRAELLREAVEQYLERQDRAETTISKALGLWQGCEEDGVEYQRKLRE
EW

Sequences:

>Translated_82_residues
MSMMAGMDMGRILLDLSDDVIKRLDDLKVQRNLPRAELLREAVEQYLERQDRAETTISKALGLWQGCEEDGVEYQRKLRE
EW
>Mature_81_residues
SMMAGMDMGRILLDLSDDVIKRLDDLKVQRNLPRAELLREAVEQYLERQDRAETTISKALGLWQGCEEDGVEYQRKLREE
W

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yiiE [H]

Homologues:

Organism=Escherichia coli, GI87082347, Length=74, Percent_Identity=74.3243243243243, Blast_Score=109, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9656; Mature: 9525

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMMAGMDMGRILLDLSDDVIKRLDDLKVQRNLPRAELLREAVEQYLERQDRAETTISKA
CCCCHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLWQGCEEDGVEYQRKLREEW
HHHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SMMAGMDMGRILLDLSDDVIKRLDDLKVQRNLPRAELLREAVEQYLERQDRAETTISKA
CCCHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLWQGCEEDGVEYQRKLREEW
HHHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]