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The map label for this gene is fdhD [H]

Identifier: 29143883

GI number: 29143883

Start: 3682160

End: 3682963

Strand: Reverse

Name: fdhD [H]

Synonym: t3582

Alternate gene names: 29143883

Gene position: 3682963-3682160 (Counterclockwise)

Preceding gene: 29143888

Following gene: 29143881

Centisome position: 76.86

GC content: 55.97

Gene sequence:

>804_bases
GTGACTGATTTCACAACCTCACGCCAGTTGACACTCTGGAAACGCGAGGATTTGCAGTCCTCCCAACTTGATGATGTTGC
CGAGGAAGTGCCAGTGGCACTGGTGTATAACGGCATTTCGCATGTCGTTATGATGGCCTCTCCGAAAGATCTGACGCATT
TCGCAATGGGGTTTTCTCTGTCGGAAGGGATCATTGACAGCCCGCGTGAAATCTATGGCATGGACGTTGTGCCGTCCTGT
AACGGACTTGAAGTGCAGATTGATCTTTCCAGCCGTCGATTTATGGGGCTGAAAGCGCGTCGTCGCGCGCTGGCCGGACG
CACCGGTTGCGGCGTGTGTGGCGTGGAACAGCTCAATGACATTGGTAAGCCGGTGCAACCGCTGCCGTTTAGCCAAACGT
TTAATCTCGGTAACCTTGATCGCGCGTTAAAACATCTGAATGATTTTCAACCGACGGGTAAGCTGACGGGTTGTACGCAC
GCTGCGGCGTGGGTCATGCCGTCGGGTGAACTGGCGGGGGGCCATGAAGATGTCGGACGCCACGTTGCGCTGGATAAACT
GCTCGGCCGCCGCGCTACGGAAGGTGAGGAATGGCGGCAAGGCGCGGCGCTGGTTTCCAGTCGTGCGAGTTACGAAATGG
TGCAGAAGTCGGCGATGTGCGGTGTGGAAATTTTGTTTGCGGTTTCTGCTGCTACCACGCTCGCGGTTGACGTCGCTGAA
CGGTGTAATCTTACGCTGGTGGGGTTCTGTAAGCCGGGTCGGGCGACGATTTATACCCATCCGCAGCGGTTAATCGCAGA
CTAA

Upstream 100 bases:

>100_bases
CATCCGGGAGGAGTTGTAACAGAATACCATAATGTTGGTGTGTGTGTTCTTATATGGTTAAAAGAAAGTGAACAATATAC
TGTCTGAAGAAGTCCTAAAT

Downstream 100 bases:

>100_bases
AATAGTACCCTCTACATTTTCGTAAAATATATATTTTCTCAATTTTACAGCCTCTCTTGATAACGGAATCACGTATACAC
GTATAGTGGCGAGGCCATAC

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MTDFTTSRQLTLWKREDLQSSQLDDVAEEVPVALVYNGISHVVMMASPKDLTHFAMGFSLSEGIIDSPREIYGMDVVPSC
NGLEVQIDLSSRRFMGLKARRRALAGRTGCGVCGVEQLNDIGKPVQPLPFSQTFNLGNLDRALKHLNDFQPTGKLTGCTH
AAAWVMPSGELAGGHEDVGRHVALDKLLGRRATEGEEWRQGAALVSSRASYEMVQKSAMCGVEILFAVSAATTLAVDVAE
RCNLTLVGFCKPGRATIYTHPQRLIAD

Sequences:

>Translated_267_residues
MTDFTTSRQLTLWKREDLQSSQLDDVAEEVPVALVYNGISHVVMMASPKDLTHFAMGFSLSEGIIDSPREIYGMDVVPSC
NGLEVQIDLSSRRFMGLKARRRALAGRTGCGVCGVEQLNDIGKPVQPLPFSQTFNLGNLDRALKHLNDFQPTGKLTGCTH
AAAWVMPSGELAGGHEDVGRHVALDKLLGRRATEGEEWRQGAALVSSRASYEMVQKSAMCGVEILFAVSAATTLAVDVAE
RCNLTLVGFCKPGRATIYTHPQRLIAD
>Mature_266_residues
TDFTTSRQLTLWKREDLQSSQLDDVAEEVPVALVYNGISHVVMMASPKDLTHFAMGFSLSEGIIDSPREIYGMDVVPSCN
GLEVQIDLSSRRFMGLKARRRALAGRTGCGVCGVEQLNDIGKPVQPLPFSQTFNLGNLDRALKHLNDFQPTGKLTGCTHA
AAWVMPSGELAGGHEDVGRHVALDKLLGRRATEGEEWRQGAALVSSRASYEMVQKSAMCGVEILFAVSAATTLAVDVAER
CNLTLVGFCKPGRATIYTHPQRLIAD

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=264, Percent_Identity=85.2272727272727, Blast_Score=481, Evalue=1e-137,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29021; Mature: 28889

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFTTSRQLTLWKREDLQSSQLDDVAEEVPVALVYNGISHVVMMASPKDLTHFAMGFSL
CCCCCCCCEEEEEEHHCCCHHHHHHHHHHCCCCEEECCHHHEEEEECCCHHHHHHHCCCC
SEGIIDSPREIYGMDVVPSCNGLEVQIDLSSRRFMGLKARRRALAGRTGCGVCGVEQLND
CCCCCCCCHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
IGKPVQPLPFSQTFNLGNLDRALKHLNDFQPTGKLTGCTHAAAWVMPSGELAGGHEDVGR
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCCCCCHHHHHH
HVALDKLLGRRATEGEEWRQGAALVSSRASYEMVQKSAMCGVEILFAVSAATTLAVDVAE
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RCNLTLVGFCKPGRATIYTHPQRLIAD
HCCEEEEEECCCCCEEEEECCHHHHCC
>Mature Secondary Structure 
TDFTTSRQLTLWKREDLQSSQLDDVAEEVPVALVYNGISHVVMMASPKDLTHFAMGFSL
CCCCCCCEEEEEEHHCCCHHHHHHHHHHCCCCEEECCHHHEEEEECCCHHHHHHHCCCC
SEGIIDSPREIYGMDVVPSCNGLEVQIDLSSRRFMGLKARRRALAGRTGCGVCGVEQLND
CCCCCCCCHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
IGKPVQPLPFSQTFNLGNLDRALKHLNDFQPTGKLTGCTHAAAWVMPSGELAGGHEDVGR
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCCCCCHHHHHH
HVALDKLLGRRATEGEEWRQGAALVSSRASYEMVQKSAMCGVEILFAVSAATTLAVDVAE
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RCNLTLVGFCKPGRATIYTHPQRLIAD
HCCEEEEEECCCCCEEEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA